BLASTX nr result

ID: Bupleurum21_contig00027204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027204
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vi...    74   9e-12
emb|CBI36955.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_003546321.1| PREDICTED: DELLA protein RGL2-like [Glycine ...    72   4e-11
ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus commun...    70   2e-10
ref|XP_002302767.1| GRAS family transcription factor [Populus tr...    70   2e-10

>ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vinifera]
          Length = 616

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
 Frame = -2

Query: 275 SVSEIIRSAGQKFIRSRPARGDDF-LELSQFP------SDEKTEDAELVIQHLLSAADNI 117
           S  E++R AG +++     RGDDF L +  F       S E+T+D ELV   LLSAA+ +
Sbjct: 180 STEEVMRVAGARYVEFSSQRGDDFTLHMHPFGFALMGLSQEETKDVELV-HFLLSAAEKV 238

Query: 116 EQQQFLRASNLITHCKEYSSNKGNPVQRLVYYFTAAL 6
             QQF RAS  +T C+  +S+ GNPV+R+V+YF  AL
Sbjct: 239 GCQQFERASRFLTRCEWIASDTGNPVERIVFYFAKAL 275


>emb|CBI36955.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
 Frame = -2

Query: 275 SVSEIIRSAGQKFIRSRPARGDDF-LELSQFP------SDEKTEDAELVIQHLLSAADNI 117
           S  E++R AG +++     RGDDF L +  F       S E+T+D ELV   LLSAA+ +
Sbjct: 146 STEEVMRVAGARYVEFSSQRGDDFTLHMHPFGFALMGLSQEETKDVELV-HFLLSAAEKV 204

Query: 116 EQQQFLRASNLITHCKEYSSNKGNPVQRLVYYFTAAL 6
             QQF RAS  +T C+  +S+ GNPV+R+V+YF  AL
Sbjct: 205 GCQQFERASRFLTRCEWIASDTGNPVERIVFYFAKAL 241


>ref|XP_003546321.1| PREDICTED: DELLA protein RGL2-like [Glycine max]
          Length = 593

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 12/106 (11%)
 Frame = -2

Query: 287 VGGRSVS--EIIRSAGQKFIRSRPARGDD----FLELSQFP------SDEKTEDAELVIQ 144
           + GR++S  +++R AG +FI+S  +  D     FLE   F       SDE+ ED EL  +
Sbjct: 163 IAGRNLSTEDLMRIAGTRFIQSSSSSSDSESLPFLENHPFGFSFSGFSDEEKEDLELA-E 221

Query: 143 HLLSAADNIEQQQFLRASNLITHCKEYSSNKGNPVQRLVYYFTAAL 6
            LL+ A+ +  +QF RAS L++HC+  SS  GNPV+R+V+YF  AL
Sbjct: 222 SLLACAEKVGNKQFERASKLLSHCESLSSKTGNPVKRIVHYFAEAL 267


>ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223541528|gb|EEF43077.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 562

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 11/115 (9%)
 Frame = -2

Query: 317 VSGSRITCCKVG---GRSVSEIIRSAGQKFIRSRPARGDDFLELSQFP--------SDEK 171
           ++G RI   K G   G S  E+IR AG +FI+S   +  D   +   P        SD++
Sbjct: 131 INGGRIV--KPGSSRGLSTEEVIRIAGARFIQSC-WQAVDITSMLHNPFGLFFSDLSDDE 187

Query: 170 TEDAELVIQHLLSAADNIEQQQFLRASNLITHCKEYSSNKGNPVQRLVYYFTAAL 6
           + + ELV + LL++A+ +  QQF RAS L+ HC+  SSN GNPVQR+VY+F+ AL
Sbjct: 188 SRNVELV-ELLLASAEKVGYQQFERASRLLNHCELLSSNIGNPVQRVVYHFSEAL 241


>ref|XP_002302767.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222844493|gb|EEE82040.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 553

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 22/124 (17%)
 Frame = -2

Query: 311 GSR--ITCCKVGGRS------------VSEIIRSAGQKFIRSRPARGDDFLELSQFP--- 183
           GSR  I C ++GG S              EIIR AG +FI+    R DDF  L   P   
Sbjct: 97  GSRKEIECSQLGGASDETWFSTRKKLSTEEIIRVAGSRFIQFSDQRYDDFSMLMH-PFGY 155

Query: 182 -----SDEKTEDAELVIQHLLSAADNIEQQQFLRASNLITHCKEYSSNKGNPVQRLVYYF 18
                S+E+T D EL    LL+ A+ +  QQF RAS L++ C+  +S + NP+QR+VYYF
Sbjct: 156 ALSGLSEEETRDVELT-HLLLATAEKVGYQQFDRASRLLSRCEWVASERSNPLQRVVYYF 214

Query: 17  TAAL 6
             AL
Sbjct: 215 AEAL 218


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