BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027202
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   506   e-141
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              506   e-141
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   478   e-132
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...   475   e-132
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...   459   e-127

>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score =  506 bits (1302), Expect = e-141
 Identities = 272/399 (68%), Positives = 300/399 (75%), Gaps = 5/399 (1%)
 Frame = +3

Query: 3    LSGKMHVXXXXXXXXXXXTDDRIVLVSNYTQTLDLIAQLCRERRYPFLRLDGSTSISKRQ 182
            LSGKMHV           TDDRIVLVSNYTQTLDL AQLCRERRYP+LRLDG+TSI+KRQ
Sbjct: 534  LSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSINKRQ 593

Query: 183  KLVNNFNDQSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 362
            KLVN F+D  KDEF FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK
Sbjct: 594  KLVNRFSDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 653

Query: 363  KRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQKEQTD-YKNQGNFLSTEDLRDLFSLHE 539
            KRVYIYRFLSTGTIEEKV+QRQMSKEGLQKVIQ+EQ D  K QGNFLSTEDLRDLFS HE
Sbjct: 654  KRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFSFHE 713

Query: 540  NVSSEIHEKMNCIRCGSCEGVVDNMLKSYGEQGGVSSVNE---DFQSDQEDIGGFAGITG 710
            NV SEIHEKMNC RC +     D   +S  E+ G  S NE    +Q D +DIGGFAGITG
Sbjct: 714  NVRSEIHEKMNCNRCQN----YDERPESVREEDGFESKNEGCQSYQMDCDDIGGFAGITG 769

Query: 711  CLHKLKNSEKQVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFTNQVSGKLVPI 890
            CLHKLK SEKQVGT LEEDLGSWGHHF  TSVPDAI QASAG+EVTFVFTNQV GKLVP+
Sbjct: 770  CLHKLKRSEKQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPV 829

Query: 891  E-PVTPKADRNNGKNHQCESKENRPVKPLATHRHTHARPWNSSNGNTTTNQLSASIKPSR 1067
            E  V           +Q + +     KP    +H  + P  S+ G++ T+  S+S KP  
Sbjct: 830  ESKVRANMQGVEANKNQSDKRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISSSSSKPFH 889

Query: 1068 REYIKSIRPHLESPNHVILKPKLSLGKQLPQKRHSPDHI 1184
               IKS+R    +P+ V LKPKLS+G QLP KR SPD +
Sbjct: 890  LAGIKSMRTSKGTPS-VTLKPKLSIGSQLPLKRLSPDSV 927


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  506 bits (1302), Expect = e-141
 Identities = 272/399 (68%), Positives = 300/399 (75%), Gaps = 5/399 (1%)
 Frame = +3

Query: 3    LSGKMHVXXXXXXXXXXXTDDRIVLVSNYTQTLDLIAQLCRERRYPFLRLDGSTSISKRQ 182
            LSGKMHV           TDDRIVLVSNYTQTLDL AQLCRERRYP+LRLDG+TSI+KRQ
Sbjct: 712  LSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSINKRQ 771

Query: 183  KLVNNFNDQSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 362
            KLVN F+D  KDEF FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK
Sbjct: 772  KLVNRFSDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 831

Query: 363  KRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQKEQTD-YKNQGNFLSTEDLRDLFSLHE 539
            KRVYIYRFLSTGTIEEKV+QRQMSKEGLQKVIQ+EQ D  K QGNFLSTEDLRDLFS HE
Sbjct: 832  KRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFSFHE 891

Query: 540  NVSSEIHEKMNCIRCGSCEGVVDNMLKSYGEQGGVSSVNE---DFQSDQEDIGGFAGITG 710
            NV SEIHEKMNC RC +     D   +S  E+ G  S NE    +Q D +DIGGFAGITG
Sbjct: 892  NVRSEIHEKMNCNRCQN----YDERPESVREEDGFESKNEGCQSYQMDCDDIGGFAGITG 947

Query: 711  CLHKLKNSEKQVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFTNQVSGKLVPI 890
            CLHKLK SEKQVGT LEEDLGSWGHHF  TSVPDAI QASAG+EVTFVFTNQV GKLVP+
Sbjct: 948  CLHKLKRSEKQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPV 1007

Query: 891  E-PVTPKADRNNGKNHQCESKENRPVKPLATHRHTHARPWNSSNGNTTTNQLSASIKPSR 1067
            E  V           +Q + +     KP    +H  + P  S+ G++ T+  S+S KP  
Sbjct: 1008 ESKVRANMQGVEANKNQSDKRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISSSSSKPFH 1067

Query: 1068 REYIKSIRPHLESPNHVILKPKLSLGKQLPQKRHSPDHI 1184
               IKS+R    +P+ V LKPKLS+G QLP KR SPD +
Sbjct: 1068 LAGIKSMRTSKGTPS-VTLKPKLSIGSQLPLKRLSPDSV 1105


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
            sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
            repair and recombination protein RAD54-like [Cucumis
            sativus]
          Length = 928

 Score =  478 bits (1229), Expect = e-132
 Identities = 255/394 (64%), Positives = 289/394 (73%), Gaps = 4/394 (1%)
 Frame = +3

Query: 3    LSGKMHVXXXXXXXXXXXTDDRIVLVSNYTQTLDLIAQLCRERRYPFLRLDGSTSISKRQ 182
            LSGKMHV           TDDRIVLVSNYTQTLDL AQLCRERRYP+LRLDG+TSISKRQ
Sbjct: 533  LSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQ 592

Query: 183  KLVNNFNDQSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 362
            KLVN FND SKDEF FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK
Sbjct: 593  KLVNRFNDLSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 652

Query: 363  KRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQKEQT-DYKNQGNFLSTEDLRDLFSLHE 539
            KRV+IYRFLSTGTIEEKVYQRQMSKEGLQKVIQ+E T +   Q NFLS+EDLRDLFS H+
Sbjct: 653  KRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHD 712

Query: 540  NVSSEIHEKMNCIRCGSCEGVVDNMLKSYGEQGGVSSVNEDFQSDQ--EDIGGFAGITGC 713
            NV SEIHEKMNC RC +C G  ++M ++        S N   QSDQ   DIGGFA + GC
Sbjct: 713  NVRSEIHEKMNCSRCQNCYGRPEDMDENL-------STNGPCQSDQVTSDIGGFAQLAGC 765

Query: 714  LHKLKNSEKQVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFTNQVSGKLVPIE 893
            L KLK SE+QVG+PLEEDLG+WGHHF+ T+VPD ILQASAG+EVTFVF+NQV GKLVP+E
Sbjct: 766  LDKLKKSEQQVGSPLEEDLGNWGHHFDSTTVPDTILQASAGDEVTFVFSNQVDGKLVPVE 825

Query: 894  PV-TPKADRNNGKNHQCESKENRPVKPLATHRHTHARPWNSSNGNTTTNQLSASIKPSRR 1070
             + +P+     G  +     +N   KP    +H       +SN +     L  +    + 
Sbjct: 826  SMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSITSNEDPNKGTLKFTSTVFQS 885

Query: 1071 EYIKSIRPHLESPNHVILKPKLSLGKQLPQKRHS 1172
            E +K +R  +E   HV LK K SLG  LPQKR S
Sbjct: 886  ETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMS 919


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
            communis] gi|223542157|gb|EEF43701.1| DNA repair and
            recombination protein RAD54B, putative [Ricinus communis]
          Length = 940

 Score =  475 bits (1223), Expect = e-132
 Identities = 263/406 (64%), Positives = 297/406 (73%), Gaps = 4/406 (0%)
 Frame = +3

Query: 3    LSGKMHVXXXXXXXXXXXTDDRIVLVSNYTQTLDLIAQLCRERRYPFLRLDGSTSISKRQ 182
            LSGKMHV           TDDRIVLVSNYTQTLDL AQLCRERRYP LRLDG+TSI KRQ
Sbjct: 542  LSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGATSIGKRQ 601

Query: 183  KLVNNFNDQSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 362
            KLVN FNDQSKDEF FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAAR+WRDGQK
Sbjct: 602  KLVNRFNDQSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARIWRDGQK 661

Query: 363  KRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQKEQTDYK-NQGNFLSTEDLRDLFSLHE 539
            KRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQ EQ D   ++GNFLSTEDLRDLF+ + 
Sbjct: 662  KRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQNDSTISEGNFLSTEDLRDLFTFYG 721

Query: 540  NVSSEIHEKMNCIRCGSCEGVVDNMLKSYGEQGGVSSVNEDFQSDQE--DIGGFAGITGC 713
            ++ SEIHEKMNC RC       D+ L+S  ++ G  SV+   +SD+E  DIGGFA I G 
Sbjct: 722  DIRSEIHEKMNCDRC----LFNDDGLESIMDEDG--SVSRRCKSDEEVFDIGGFAKIAGI 775

Query: 714  LHKLKNSEKQVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFTNQVSGKLVPIE 893
            LH+LK+SEKQVGTPLEEDLGSWGHHF+ TSVPDAILQASAG+EVTFVFTNQV GKLVPIE
Sbjct: 776  LHELKSSEKQVGTPLEEDLGSWGHHFHSTSVPDAILQASAGDEVTFVFTNQVDGKLVPIE 835

Query: 894  -PVTPKADRNNGKNHQCESKENRPVKPLATHRHTHARPWNSSNGNTTTNQLSASIKPSRR 1070
               +PK     G  +Q + KEN   +     +H       S++ ++    LSAS KP   
Sbjct: 836  STASPKMLEIKGNQNQHDGKENMS-RTSRLFQHQKLLQSISASRDSLEETLSASFKPLEG 894

Query: 1071 EYIKSIRPHLESPNHVILKPKLSLGKQLPQKRHSPDHIXXXXXXFQ 1208
              +K  R  L+      LK +LS G QLP KR  P ++      F+
Sbjct: 895  ATVKRRRTSLKGTTDSTLKSRLSSGTQLPFKRVFPYNVEQHDDDFE 940


>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
            max]
          Length = 894

 Score =  459 bits (1180), Expect = e-127
 Identities = 255/399 (63%), Positives = 284/399 (71%), Gaps = 5/399 (1%)
 Frame = +3

Query: 3    LSGKMHVXXXXXXXXXXXTDDRIVLVSNYTQTLDLIAQLCRERRYPFLRLDGSTSISKRQ 182
            LSGKMHV           T+DRIVLVSNYTQTLDL AQLCRERRYP LRLDGSTSISKRQ
Sbjct: 524  LSGKMHVLARLLAHLRQRTNDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGSTSISKRQ 583

Query: 183  KLVNNFNDQSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 362
            KLVN FND SKDEF FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK
Sbjct: 584  KLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQK 643

Query: 363  KRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQKEQTD-YKNQGNFLSTEDLRDLFSLHE 539
            KRVYIYRFLS GTIEEKVYQRQMSKEGLQKVIQ+EQTD    QGN LSTE+LRDLF+ HE
Sbjct: 644  KRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQQEQTDSLVAQGNLLSTENLRDLFTFHE 703

Query: 540  NVSSEIHEKMNCIRCGSCEGVVDNMLKSYGEQGGVSSVNEDFQSDQE--DIGGFAGITGC 713
            N+ SEIHE M C RC + +G      +S   Q  ++    D +SD+E  DIGGFA I GC
Sbjct: 704  NIKSEIHENMQCSRCQTFDGP-----RSTEAQSTIT----DSESDEETSDIGGFAEIAGC 754

Query: 714  LHKLKNSEKQVGTPLEEDLGSWGHHFNPTSVPDAILQASAGNEVTFVFTNQVSGKLVPIE 893
            L  LK SEKQVG+PLEEDLGSWGHHF PTSVPDAILQASAG+EVTFVFTNQV+G+LVP+E
Sbjct: 755  LQNLKRSEKQVGSPLEEDLGSWGHHFFPTSVPDAILQASAGDEVTFVFTNQVNGRLVPVE 814

Query: 894  PV-TPKADRNNGKNHQCESKENRPVKPLATHRHTHARPWNSSNGNTTTNQLSASIKPSRR 1070
             + +PK  + + K    +SK+N   KP     H      ++S G T    +         
Sbjct: 815  SIMSPKLQQKDPKKELLKSKQNGKQKPTPFSLHNRLPLQSASVGITKNISM--------- 865

Query: 1071 EYIKSIRPHLESPNHVILKPKLSL-GKQLPQKRHSPDHI 1184
                          +V  KP+ SL  K LPQKR  P +I
Sbjct: 866  --------------NVAFKPQYSLVSKVLPQKRSCPANI 890