BLASTX nr result

ID: Bupleurum21_contig00027192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027192
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   266   2e-69
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   266   2e-69
ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   258   6e-67
ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...   251   6e-65
ref|NP_174294.1| Intron maturase, type II-like protein [Arabidop...   249   3e-64

>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  266 bits (680), Expect = 2e-69
 Identities = 127/157 (80%), Positives = 146/157 (92%)
 Frame = +2

Query: 2   KIVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIASRNLSRPLVESTNNSAPEYSDLLRMG 181
           KIVGFCAYV+RSSLAKLYAARYRLKSRAKVY IASRNLSRPL ES+NNSAPEYSDLLRMG
Sbjct: 528 KIVGFCAYVVRSSLAKLYAARYRLKSRAKVYGIASRNLSRPLRESSNNSAPEYSDLLRMG 587

Query: 182 LVDAIEGVQFSHMSLIPSCDYTVFPRNWIPDHERVIHEYINLQDPKFFCELQRSIKKQGL 361
           LVDAIEGVQFSHMSLIPSCDYT FPRNWIPDHERV+HEYI L++PKFFCEL RS+K++GL
Sbjct: 588 LVDAIEGVQFSHMSLIPSCDYTPFPRNWIPDHERVLHEYIKLENPKFFCELLRSVKRKGL 647

Query: 362 TLPQDEISEIVWDFKTLGMRSYRSSDEKEAKNASEEI 472
           +LPQDEIS++VWD+KTLG+R ++ + +KE K+  +EI
Sbjct: 648 SLPQDEISQMVWDYKTLGVRYFQCNKDKEIKSDLKEI 684


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  266 bits (680), Expect = 2e-69
 Identities = 129/157 (82%), Positives = 142/157 (90%)
 Frame = +2

Query: 2   KIVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIASRNLSRPLVESTNNSAPEYSDLLRMG 181
           K+VGFCAYVIRSSLAKLYAARYRLKSRAKVYKIASRNLSRPL ES+N+SAPEYSDLLRMG
Sbjct: 521 KVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIASRNLSRPLRESSNSSAPEYSDLLRMG 580

Query: 182 LVDAIEGVQFSHMSLIPSCDYTVFPRNWIPDHERVIHEYINLQDPKFFCELQRSIKKQGL 361
           LVDAIEGVQFSHMS IPSCDYT FPR W+PDHE+V+HEYI LQDPKFFC+L RSIK QGL
Sbjct: 581 LVDAIEGVQFSHMSSIPSCDYTPFPRIWVPDHEQVLHEYIRLQDPKFFCDLHRSIKHQGL 640

Query: 362 TLPQDEISEIVWDFKTLGMRSYRSSDEKEAKNASEEI 472
           TLPQDEISEIVW++KTLG+R  +SS EKE  +  E +
Sbjct: 641 TLPQDEISEIVWEYKTLGIRRNQSSGEKELNSTPENV 677


>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  258 bits (659), Expect = 6e-67
 Identities = 127/154 (82%), Positives = 139/154 (90%)
 Frame = +2

Query: 2   KIVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIASRNLSRPLVESTNNSAPEYSDLLRMG 181
           KIVGFCAYVIRSSLAKLYAARYRLKSRAKVY IASR+LSRPL ES+NNSAPEYSDLLRMG
Sbjct: 529 KIVGFCAYVIRSSLAKLYAARYRLKSRAKVYNIASRDLSRPLRESSNNSAPEYSDLLRMG 588

Query: 182 LVDAIEGVQFSHMSLIPSCDYTVFPRNWIPDHERVIHEYINLQDPKFFCELQRSIKKQGL 361
           LVDAIEGVQFSHMS IPSCDY  FPRNWIPDHE+V+ EYI L +PKFFC+L RSIK++GL
Sbjct: 589 LVDAIEGVQFSHMSSIPSCDYAPFPRNWIPDHEQVLREYIKLDNPKFFCDLLRSIKQEGL 648

Query: 362 TLPQDEISEIVWDFKTLGMRSYRSSDEKEAKNAS 463
           +LPQDEIS+IVWD+KTLG+ S RS  EKE KN S
Sbjct: 649 SLPQDEISDIVWDYKTLGVWSKRSDGEKELKNDS 682


>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  251 bits (642), Expect = 6e-65
 Identities = 120/135 (88%), Positives = 130/135 (96%)
 Frame = +2

Query: 2   KIVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIASRNLSRPLVESTNNSAPEYSDLLRMG 181
           K+VGFCAYVIRSSLAKLYAARYRLKSRAKVYKIA R+LSRPL E++NNSAPEYSDLLRMG
Sbjct: 489 KVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIALRDLSRPLRENSNNSAPEYSDLLRMG 548

Query: 182 LVDAIEGVQFSHMSLIPSCDYTVFPRNWIPDHERVIHEYINLQDPKFFCELQRSIKKQGL 361
           LVDAIEGVQFSHMSLIP+CDYT FPRNWIPDHE+V+HEYI LQDPKFFCEL RSIK+QGL
Sbjct: 549 LVDAIEGVQFSHMSLIPTCDYTPFPRNWIPDHEQVLHEYIRLQDPKFFCELHRSIKRQGL 608

Query: 362 TLPQDEISEIVWDFK 406
           +LPQDEISEIVWD+K
Sbjct: 609 SLPQDEISEIVWDYK 623


>ref|NP_174294.1| Intron maturase, type II-like protein [Arabidopsis thaliana]
            gi|12324175|gb|AAG52062.1|AC022455_16 unknown protein;
            35070-37205 [Arabidopsis thaliana]
            gi|332193046|gb|AEE31167.1| Intron maturase, type II-like
            protein [Arabidopsis thaliana]
          Length = 711

 Score =  249 bits (636), Expect = 3e-64
 Identities = 122/157 (77%), Positives = 137/157 (87%)
 Frame = +2

Query: 2    KIVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIASRNLSRPLVESTNNSAPEYSDLLRMG 181
            K VGFCAYVIRSSLAKLYAARYRLKSRAKVY IASR+LS PL ES+NNSAPEYSDLLRMG
Sbjct: 551  KAVGFCAYVIRSSLAKLYAARYRLKSRAKVYSIASRDLSHPLSESSNNSAPEYSDLLRMG 610

Query: 182  LVDAIEGVQFSHMSLIPSCDYTVFPRNWIPDHERVIHEYINLQDPKFFCELQRSIKKQGL 361
            LVDAIEGVQFS MSLIPSCDYT FPRNWIP+HE+V+ EYI LQDPKFFC L RSIK++GL
Sbjct: 611  LVDAIEGVQFSRMSLIPSCDYTPFPRNWIPNHEQVLQEYIRLQDPKFFCGLHRSIKREGL 670

Query: 362  TLPQDEISEIVWDFKTLGMRSYRSSDEKEAKNASEEI 472
            TLPQDEISE VWDFKTLG    +  +++EA +  +++
Sbjct: 671  TLPQDEISEAVWDFKTLGAWRSKYENKREADDGLQKL 707


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