BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027179
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                131   5e-29
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   131   5e-29
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     124   1e-26
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                119   2e-25
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               116   2e-24

>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/135 (45%), Positives = 90/135 (66%)
 Frame = +2

Query: 5   DNGKQFDCEEMMNFCDELGIKQSFSAVCHPQSNGKTEAXXXXXXXXXXXXLNEHKGRWAD 184
           D+G QFDC+ + ++C E  IK + +AVCHPQSNG+ EA            L EHKG WAD
Sbjct: 547 DHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNGQAEAANKQILLALQKKLEEHKGLWAD 606

Query: 185 ELSKVLWSNNTTPRSTTGETPFSLAYGCEAMVPVEIGMGSVRREYFDEGLNEEMQRLQLD 364
            + +VLW+N TT +  TG++PFSLA+G EA+VP+E+G+ S R +++D  +NE++ R  LD
Sbjct: 607 LVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPIEVGLPSFRVQHYDPEVNEQLMREALD 666

Query: 365 LIEEERDLSHERLAA 409
            + E R  +  +LAA
Sbjct: 667 QLPEMRLQAALKLAA 681


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/135 (45%), Positives = 90/135 (66%)
 Frame = +2

Query: 5   DNGKQFDCEEMMNFCDELGIKQSFSAVCHPQSNGKTEAXXXXXXXXXXXXLNEHKGRWAD 184
           D+G QFDC+ + ++C E  IK + +AVCHPQSNG+ EA            L EHKG WAD
Sbjct: 547 DHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNGQAEAANKQILLALQKKLEEHKGLWAD 606

Query: 185 ELSKVLWSNNTTPRSTTGETPFSLAYGCEAMVPVEIGMGSVRREYFDEGLNEEMQRLQLD 364
            + +VLW+N TT +  TG++PFSLA+G EA+VP+E+G+ S R +++D  +NE++ R  LD
Sbjct: 607 LVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPIEVGLPSFRVQHYDPEVNEQLMREALD 666

Query: 365 LIEEERDLSHERLAA 409
            + E R  +  +LAA
Sbjct: 667 QLPEMRLQAALKLAA 681


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/137 (45%), Positives = 86/137 (62%)
 Frame = +2

Query: 5    DNGKQFDCEEMMNFCDELGIKQSFSAVCHPQSNGKTEAXXXXXXXXXXXXLNEHKGRWAD 184
            D+G++F  + +MN+ +ELGIK ++S+VCHPQSNG+ EA            + + KGRWAD
Sbjct: 1090 DHGREFWSDMVMNWLEELGIKFAYSSVCHPQSNGQAEAANKTILNGLKKKVEDLKGRWAD 1149

Query: 185  ELSKVLWSNNTTPRSTTGETPFSLAYGCEAMVPVEIGMGSVRREYFDEGLNEEMQRLQLD 364
            EL  VLWS  TT +  TG +PF L YG EA++P+E  + + R   F+   NEE  +  LD
Sbjct: 1150 ELPGVLWSLRTTEKEATGYSPFHLVYGSEAVLPIEAVVPTFRTATFNPVENEEGLKASLD 1209

Query: 365  LIEEERDLSHERLAAYQ 415
            L+EE RD +   LA YQ
Sbjct: 1210 LVEESRDTARLNLAVYQ 1226


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/138 (38%), Positives = 85/138 (61%)
 Frame = +2

Query: 2    SDNGKQFDCEEMMNFCDELGIKQSFSAVCHPQSNGKTEAXXXXXXXXXXXXLNEHKGRWA 181
            SDNG QFD +    +C ++GI+  +S   +PQ N + EA            L++ KGRW 
Sbjct: 888  SDNGLQFDSKAFRRYCADIGIRNGYSTPAYPQGNSQAEATNKVILAGLKKHLDDAKGRWV 947

Query: 182  DELSKVLWSNNTTPRSTTGETPFSLAYGCEAMVPVEIGMGSVRREYFDEGLNEEMQRLQL 361
            +EL  VLW+  TTPR +TGETPFS+ YG EA++P+E+G  +++ + ++   N +M    L
Sbjct: 948  EELPHVLWAYRTTPRRSTGETPFSMTYGMEAVIPLELGFPTLKFDQYNNVTNHDMLHDSL 1007

Query: 362  DLIEEERDLSHERLAAYQ 415
            + IEE R+++  ++ +YQ
Sbjct: 1008 NTIEERREVASVKMGSYQ 1025


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/128 (47%), Positives = 79/128 (61%)
 Frame = +2

Query: 2    SDNGKQFDCEEMMNFCDELGIKQSFSAVCHPQSNGKTEAXXXXXXXXXXXXLNEHKGRWA 181
            +DNG+QF    +  F ++L IK   S+V HPQ+NG+ EA            L   KG W 
Sbjct: 1643 TDNGRQFTDRGLAEFYEKLHIKHITSSVEHPQTNGQAEAANKVILNELKKRLGPSKGNWT 1702

Query: 182  DELSKVLWSNNTTPRSTTGETPFSLAYGCEAMVPVEIGMGSVRREYFDEGLNEEMQRLQL 361
            +EL +VLW+   TP+STT ETP+SL YG EAM+PVEIG  S+RR+  D  LN+E   + L
Sbjct: 1703 EELLEVLWAYRCTPQSTTQETPYSLTYGTEAMIPVEIGEPSLRRQTLDLDLNKESLLVGL 1762

Query: 362  DLIEEERD 385
            DLI E RD
Sbjct: 1763 DLINELRD 1770