BLASTX nr result

ID: Bupleurum21_contig00027146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027146
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF47192.1| embryonic element binding Factor 6 [Daucus carota]    157   1e-36
emb|CAB93939.1| AP2-domain DNA-binding protein [Catharanthus ros...   124   1e-26
gb|ADJ67432.1| ethylene response factor 3 [Actinidia deliciosa]       122   5e-26
gb|ADX06857.1| AP2/ERF domain-containing transcription factor [P...   119   5e-25
gb|AFJ14632.1| dehydration-responsive element-binding protein (D...   118   8e-25

>dbj|BAF47192.1| embryonic element binding Factor 6 [Daucus carota]
          Length = 373

 Score =  157 bits (397), Expect = 1e-36
 Identities = 85/139 (61%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
 Frame = -2

Query: 410 RNSIMGIIDQACTIAL--VVDFRKRKSQS-QTKSVAETLAMWKDYNKKLDALNGSAGPIR 240
           RNS+MG+I Q        + D RKRKS+S +TKSVAETLAMW+DYNKKLDALN SA PIR
Sbjct: 8   RNSMMGLIKQDSDTGTPRIGDSRKRKSRSTKTKSVAETLAMWRDYNKKLDALNASAKPIR 67

Query: 239 SIHSXXXXXXXXXXXXGPENRRSNYRGVRQRTWGKWVAEIREPNGGKRLWLGTFPNXXXX 60
           + H+            GP+N RSN+RGVRQRTWGKWVAEIREP GG RLWLGTFPN    
Sbjct: 68  NFHAKGSKKGCMKGKGGPDNTRSNFRGVRQRTWGKWVAEIREPGGGSRLWLGTFPNAVEA 127

Query: 59  XXXXXXXXXAMYGASARLN 3
                    AMYGA ARLN
Sbjct: 128 ALAYDEAARAMYGAGARLN 146


>emb|CAB93939.1| AP2-domain DNA-binding protein [Catharanthus roseus]
          Length = 376

 Score =  124 bits (311), Expect = 1e-26
 Identities = 72/136 (52%), Positives = 85/136 (62%), Gaps = 4/136 (2%)
 Frame = -2

Query: 398 MGIIDQACTIA-LVVDF-RKRKSQSQ--TKSVAETLAMWKDYNKKLDALNGSAGPIRSIH 231
           M ++DQA  ++ +  DF RKRKS+ +  TK+VAETLA WK+YN+KLDAL+G   P R + 
Sbjct: 1   MALLDQASNLSPMPFDFTRKRKSRRRDGTKNVAETLAKWKEYNEKLDALDGGK-PARKVP 59

Query: 230 SXXXXXXXXXXXXGPENRRSNYRGVRQRTWGKWVAEIREPNGGKRLWLGTFPNXXXXXXX 51
           +            GPEN    YRGVRQRTWGKWVAEIREPN G RLWLGTF N       
Sbjct: 60  AKGSKKGCMKGKGGPENSHCKYRGVRQRTWGKWVAEIREPNRGSRLWLGTFRNAIEAALA 119

Query: 50  XXXXXXAMYGASARLN 3
                 AMYG  ARLN
Sbjct: 120 YDEAARAMYGPCARLN 135


>gb|ADJ67432.1| ethylene response factor 3 [Actinidia deliciosa]
          Length = 341

 Score =  122 bits (305), Expect = 5e-26
 Identities = 67/137 (48%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
 Frame = -2

Query: 398 MGIIDQACTIALV-VDF-RKRKSQSQT---KSVAETLAMWKDYNKKLDALNGSAGPIRSI 234
           MG +D A  +A V +D+ RKRK++++      + ETLA WK+YN+KL++L+ S  P+R  
Sbjct: 11  MGFLDHASNMASVPLDYSRKRKARNRRDGPNGIVETLAKWKEYNEKLESLDNSPKPVRRA 70

Query: 233 HSXXXXXXXXXXXXGPENRRSNYRGVRQRTWGKWVAEIREPNGGKRLWLGTFPNXXXXXX 54
            +            GP+N   NYRGVRQRTWGKWVAEIREPN G RLWLGTFP       
Sbjct: 71  PAKGSKKGCMKGKGGPQNSNCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTALEAAR 130

Query: 53  XXXXXXXAMYGASARLN 3
                  AMYG SARLN
Sbjct: 131 AYDEAAKAMYGPSARLN 147


>gb|ADX06857.1| AP2/ERF domain-containing transcription factor [Populus tomentosa]
          Length = 287

 Score =  119 bits (297), Expect = 5e-25
 Identities = 63/131 (48%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
 Frame = -2

Query: 392 IIDQACTIALVVDFRKRKSQSQTKSVAETLAMWKDYNKKLDA-LNGSAGPIRSIHSXXXX 216
           +I  +   ++ +D  K++ ++  KSVAETL  WKDYN+ LDA ++G   P+R + +    
Sbjct: 4   LIQGSNATSMSMDSTKKRKRASNKSVAETLQKWKDYNEYLDAQVDGGKKPVRKVPAKGSK 63

Query: 215 XXXXXXXXGPENRRSNYRGVRQRTWGKWVAEIREPNGGKRLWLGTFPNXXXXXXXXXXXX 36
                   GPEN   NYRGVRQRTWGKWVAEIREPN G RLWLGTFP             
Sbjct: 64  KGCMKGKGGPENSVCNYRGVRQRTWGKWVAEIREPNRGPRLWLGTFPTAYEAALAYDNAA 123

Query: 35  XAMYGASARLN 3
            AMYG  ARLN
Sbjct: 124 RAMYGPCARLN 134


>gb|AFJ14632.1| dehydration-responsive element-binding protein (DREB2), partial
           [Malus x domestica]
          Length = 398

 Score =  118 bits (295), Expect = 8e-25
 Identities = 69/136 (50%), Positives = 82/136 (60%), Gaps = 4/136 (2%)
 Frame = -2

Query: 398 MGIIDQACTIA-LVVDF-RKRKSQSQT--KSVAETLAMWKDYNKKLDALNGSAGPIRSIH 231
           MG  DQ   ++ L +D  RKRK++S+    SVAETL  WK+YNKKL+++N   G  R + 
Sbjct: 1   MGAYDQGANMSSLPLDSSRKRKTRSRRDGNSVAETLEKWKEYNKKLESVNNE-GKTRKVP 59

Query: 230 SXXXXXXXXXXXXGPENRRSNYRGVRQRTWGKWVAEIREPNGGKRLWLGTFPNXXXXXXX 51
           +            GPEN R NYRGVRQRTWGKWVAEIREP+ G RLWLGTFP        
Sbjct: 60  AKGSKKGCMKGKGGPENARCNYRGVRQRTWGKWVAEIREPDRGSRLWLGTFPTALDAALA 119

Query: 50  XXXXXXAMYGASARLN 3
                 AMYG  ARLN
Sbjct: 120 YDEAAKAMYGTGARLN 135


Top