BLASTX nr result

ID: Bupleurum21_contig00027145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027145
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28040.3| unnamed protein product [Vitis vinifera]              140   1e-31
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]   140   1e-31
ref|XP_003630767.1| U-box domain-containing protein [Medicago tr...   139   3e-31
ref|XP_003532482.1| PREDICTED: uncharacterized protein LOC100808...   131   7e-29
ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ric...   129   2e-28

>emb|CBI28040.3| unnamed protein product [Vitis vinifera]
          Length = 1154

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/116 (61%), Positives = 90/116 (77%)
 Frame = +2

Query: 5   LKMCIRPQTASILLLKQILGSADEISILGAVSSLMLEEVIGNIVSSLKAEWHEERSAAVS 184
           L+MC++P+TASILLL QILGS++   +     +++  + I +IV SL+AEW EER AAV 
Sbjct: 468 LEMCLKPKTASILLLGQILGSSEGNIVTSIAKTVVSAKAIKSIVESLEAEWAEERIAAVG 527

Query: 185 ILLRCMQEDGNCRNLIAHNAELALVLESFLEANDGERFQIVQFLSELVKLNRRVYN 352
           ILLRCMQEDG CR+ IA  AELA VLESF+ A+DGERF+I+ F SELVKLNRR +N
Sbjct: 528 ILLRCMQEDGKCRHTIADKAELAPVLESFMGASDGERFEIINFFSELVKLNRRTFN 583


>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
          Length = 1618

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/116 (61%), Positives = 90/116 (77%)
 Frame = +2

Query: 5    LKMCIRPQTASILLLKQILGSADEISILGAVSSLMLEEVIGNIVSSLKAEWHEERSAAVS 184
            L+MC++P+TASILLL QILGS++   +     +++  + I +IV SL+AEW EER AAV 
Sbjct: 932  LEMCLKPKTASILLLGQILGSSEGNIVTSIAKTVVSAKAIKSIVESLEAEWAEERIAAVG 991

Query: 185  ILLRCMQEDGNCRNLIAHNAELALVLESFLEANDGERFQIVQFLSELVKLNRRVYN 352
            ILLRCMQEDG CR+ IA  AELA VLESF+ A+DGERF+I+ F SELVKLNRR +N
Sbjct: 992  ILLRCMQEDGKCRHTIADKAELAPVLESFMGASDGERFEIINFFSELVKLNRRTFN 1047


>ref|XP_003630767.1| U-box domain-containing protein [Medicago truncatula]
           gi|355524789|gb|AET05243.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 1068

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/124 (57%), Positives = 89/124 (71%), Gaps = 7/124 (5%)
 Frame = +2

Query: 2   LLKMCIRPQTASILLLKQILGSADEISILGAVSSLMLEEVIGNIVSSLKAEWHEERSAAV 181
           L+ MC+ P+TA++LLL QI+GS+DEI     V +L  E+ +G IV SL AEW EER  AV
Sbjct: 403 LVNMCLNPKTAAVLLLGQIIGSSDEIIASSIVKTLFSEKALGAIVGSLGAEWAEERIVAV 462

Query: 182 SILLRCMQEDGNCRNLIAHNAELALVLESFLEANDGERFQIVQFLSELVKLN-------R 340
            ILLRCMQEDG CRN IA  AEL+ ++ESF+ AND ERF+IV+F SEL+KLN       R
Sbjct: 463 EILLRCMQEDGTCRNTIADKAELSSIMESFIHANDAERFKIVEFFSELIKLNSFQLVPSR 522

Query: 341 RVYN 352
           R +N
Sbjct: 523 RTFN 526


>ref|XP_003532482.1| PREDICTED: uncharacterized protein LOC100808867 [Glycine max]
          Length = 1492

 Score =  131 bits (329), Expect = 7e-29
 Identities = 65/116 (56%), Positives = 89/116 (76%)
 Frame = +2

Query: 2    LLKMCIRPQTASILLLKQILGSADEISILGAVSSLMLEEVIGNIVSSLKAEWHEERSAAV 181
            L+KMC++P+TA++LLL +I+GS++EI     V++L  E+ IG IV SL A+  +ER AAV
Sbjct: 673  LVKMCLKPKTAAVLLLARIVGSSEEIIASSVVNTLFSEKTIGTIVGSLGADLAKERIAAV 732

Query: 182  SILLRCMQEDGNCRNLIAHNAELALVLESFLEANDGERFQIVQFLSELVKLNRRVY 349
             ILLRCM+EDG CRN IA  AEL+ +LE+ + A DG+RF+I+QF  ELVKLNRR +
Sbjct: 733  EILLRCMEEDGTCRNNIADKAELSPILETLIGATDGDRFKIIQFFFELVKLNRRTF 788


>ref|XP_002514271.1| F-box and wd40 domain protein, putative [Ricinus communis]
            gi|223546727|gb|EEF48225.1| F-box and wd40 domain
            protein, putative [Ricinus communis]
          Length = 1268

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/114 (58%), Positives = 87/114 (76%)
 Frame = +2

Query: 2    LLKMCIRPQTASILLLKQILGSADEISILGAVSSLMLEEVIGNIVSSLKAEWHEERSAAV 181
            +LKMC++P+TA++LLL QIL S++E  ++  V++++  +VI +I   L+AE  EER AAV
Sbjct: 668  MLKMCLKPKTAAVLLLGQILSSSEESIVISIVNAIVSTKVIESIAGCLEAECAEERIAAV 727

Query: 182  SILLRCMQEDGNCRNLIAHNAELALVLESFLEANDGERFQIVQFLSELVKLNRR 343
             IL RCMQE G CRN I+  AELA VL+SFL A DGERF+IV F SELVKLNRR
Sbjct: 728  GILSRCMQEHGKCRNTISAKAELAPVLDSFLSATDGERFEIVLFFSELVKLNRR 781


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