BLASTX nr result

ID: Bupleurum21_contig00027142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027142
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324606.1| predicted protein [Populus trichocarpa] gi|2...   357   3e-96
ref|XP_002532144.1| conserved hypothetical protein [Ricinus comm...   340   4e-91
ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265...   323   4e-86
ref|XP_002867893.1| EMB1895 [Arabidopsis lyrata subsp. lyrata] g...   288   1e-75
ref|NP_193739.1| integrator complex subunit 7 [Arabidopsis thali...   280   5e-73

>ref|XP_002324606.1| predicted protein [Populus trichocarpa] gi|222866040|gb|EEF03171.1|
            predicted protein [Populus trichocarpa]
          Length = 1237

 Score =  357 bits (917), Expect = 3e-96
 Identities = 196/403 (48%), Positives = 268/403 (66%), Gaps = 4/403 (0%)
 Frame = -2

Query: 1201 MEKIPAACAMEWSIELEKSLRSNKPGKSFEAIQKIGSNLEWWNSEDKLTMAEYNFFGLLP 1022
            ME+I AACAMEWSIELEK+LRS KPG++ E IQ+IG  ++ W+ E K TMA YN FGL+ 
Sbjct: 1    MERISAACAMEWSIELEKALRSKKPGQTIEGIQRIGKRIQEWSKEPKPTMAVYNMFGLVT 60

Query: 1021 GEDQFYANAILLRLVDAFSFGDKQMKHCIVKLFMSEYKHRK----KGKKNDGVLSKGRFT 854
            GED+ +AN ILLRL DAF FGD++ +  IVK+F+ E K R     KG++  G+LSK R  
Sbjct: 61   GEDRLFANTILLRLADAFRFGDRETRVSIVKVFLLELKSRDNKKMKGRQYRGILSKDRVQ 120

Query: 853  NYLEVLRRVKVVFEDGDVEVRSMALSLFGCWADFAHESAEIRYIILSTLVSSDILEVKAS 674
            N++E+L+RVK+VF+ GDV+ +++AL+LFGCWA FA +SA IRY+ILS+++SSD+L+V+AS
Sbjct: 121  NHVELLKRVKIVFDTGDVDSKALALALFGCWAPFAKDSAHIRYLILSSMISSDVLQVQAS 180

Query: 673  LFAAGCFCELSDDFACVVLEILVSMVSSSEISKDIRMAGMRSLAKLGVSHELATRAYEAG 494
            LFAAGCFCEL+ DF  VVLE+LV+MV+SSE    IR+ G R  AK+G S+ +A+RAY+ G
Sbjct: 181  LFAAGCFCELAGDFVPVVLEMLVNMVTSSETLLTIRLVGTRVFAKMGPSYSVASRAYKTG 240

Query: 493  XXXXXXXXXXXXXXXXXXXXXXIAAKSTLLTSTQVKMLFSFLSQDKSFCLQATALKCLRF 314
                                  +A+KSTLL   QV +L  FLSQ+K    QATAL+CL F
Sbjct: 241  -LKLLDSLEEDLVVTMLVSLTKLASKSTLLLLEQVDLLLPFLSQEKDLLFQATALRCLHF 299

Query: 313  ILAGGPHTVHASADAIDTLLCKLNEFKMQPALRCVTLQILHKILLQNVFSFSYHDMLEVI 134
            I   G      SA  I T    ++E  +  +++C  LQILHK+LL  + +    +MLE +
Sbjct: 300  IFMRGVVYSSVSAHGIKTFSRIVDEADLPLSMQCEALQILHKMLLYRLHNLPQDNMLE-L 358

Query: 133  SKLLIIAEDGIQSSTFPDGVLSINLLIDVYSKFIRRADSEVDG 5
            S LL   E+  +SS     +L+I++  D+  K  RRA+ E  G
Sbjct: 359  SPLLTTIENSAESSIMSKSLLAIHIQADLSMKLSRRAEMESGG 401


>ref|XP_002532144.1| conserved hypothetical protein [Ricinus communis]
            gi|223528180|gb|EEF30243.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1166

 Score =  340 bits (872), Expect = 4e-91
 Identities = 186/403 (46%), Positives = 262/403 (65%), Gaps = 3/403 (0%)
 Frame = -2

Query: 1201 MEKIPAACAMEWSIELEKSLRSNKPGKSFEAIQKIGSNLEWWNSEDKLTMAEYNFFGLLP 1022
            ME+I AACAMEWSIELEKSLRS +PG++ +AIQ+ G+ L+ W+ E K TMA Y+ FGL+ 
Sbjct: 1    MERISAACAMEWSIELEKSLRSKRPGQAVKAIQQFGARLQQWSREPKPTMAVYHIFGLVM 60

Query: 1021 GEDQFYANAILLRLVDAFSFGDKQMKHCIVKLFMSEYKHRKKGKKN---DGVLSKGRFTN 851
            GED+ +AN I LRL D F  GD+  +  IV +F+SE+++  KGKK    +G+LSK R  N
Sbjct: 61   GEDRVFANTIFLRLADVFRLGDRDTRLSIVSVFLSEFRNHVKGKKGRRYEGILSKDRIHN 120

Query: 850  YLEVLRRVKVVFEDGDVEVRSMALSLFGCWADFAHESAEIRYIILSTLVSSDILEVKASL 671
            ++E+L+RVK+V++ GDVE R+MAL LFGCWADFA +SA IRY+ILS+LVSS+ILEVKASL
Sbjct: 121  HMELLKRVKIVYDTGDVESRAMALVLFGCWADFAKDSAHIRYLILSSLVSSEILEVKASL 180

Query: 670  FAAGCFCELSDDFACVVLEILVSMVSSSEISKDIRMAGMRSLAKLGVSHELATRAYEAGX 491
            FAA CFCEL+ DFA VVLE+L +++ S + S  IR+AG+R +AK+G S+  A  AY+ G 
Sbjct: 181  FAASCFCELAADFAYVVLEMLPNIMLSPDTSLTIRLAGVRVIAKMGSSYSTANSAYKIGL 240

Query: 490  XXXXXXXXXXXXXXXXXXXXXIAAKSTLLTSTQVKMLFSFLSQDKSFCLQATALKCLRFI 311
                                 +A +ST L S QV +L+SFLS  ++  LQATAL+CL F+
Sbjct: 241  KLLSGSSEEDFLVAVLVSLSKLANRSTFLLSEQVNLLWSFLSSGRTLRLQATALRCLHFM 300

Query: 310  LAGGPHTVHASADAIDTLLCKLNEFKMQPALRCVTLQILHKILLQNVFSFSYHDMLEVIS 131
               G      ++  I  LL  +++ ++   ++   LQI HKILL  +      +MLE  +
Sbjct: 301  YVKGVCQSPVNSHVIKILLRIIDDIELPSTMQYEALQISHKILLYGILDLPCDNMLE-FT 359

Query: 130  KLLIIAEDGIQSSTFPDGVLSINLLIDVYSKFIRRADSEVDGE 2
            +LL I E        P  +L++ +L+D+ +K      +  DG+
Sbjct: 360  QLLNIIEKAANLPITPKSLLAVRILVDLSTKLRGGIKTGSDGD 402


>ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265170 [Vitis vinifera]
            gi|296082233|emb|CBI21238.3| unnamed protein product
            [Vitis vinifera]
          Length = 1166

 Score =  323 bits (829), Expect = 4e-86
 Identities = 183/402 (45%), Positives = 254/402 (63%), Gaps = 3/402 (0%)
 Frame = -2

Query: 1201 MEKIPAACAMEWSIELEKSLRSNKPGKSFEAIQKIGSNLEWWNSEDKLTMAEYNFFGLLP 1022
            ME+I AACAMEWSI+LEK LRS   G   EAI +IG  LE WN E + T+  Y  FGL+P
Sbjct: 1    MERISAACAMEWSIDLEKGLRSKVAGGPVEAILQIGQRLEQWNREPEPTLPVYKMFGLVP 60

Query: 1021 GEDQFYANAILLRLVDAFSFGDKQMKHCIVKLFMS---EYKHRKKGKKNDGVLSKGRFTN 851
            GED+ +ANAILLRL +AF  GD  ++H +V++F+S     K++  G KN G+LSK R  N
Sbjct: 61   GEDRLFANAILLRLAEAFRVGDHSVRHSVVRVFLSLRSRNKNKYNGGKNYGILSKHRVHN 120

Query: 850  YLEVLRRVKVVFEDGDVEVRSMALSLFGCWADFAHESAEIRYIILSTLVSSDILEVKASL 671
              ++L RVK+VF+ GDV+ R++ L LFGCWADFA +SAEIRYIILS+LVSS ++EV+AS 
Sbjct: 121  QSQLLSRVKIVFDSGDVQSRALTLVLFGCWADFAKDSAEIRYIILSSLVSSHVVEVRASF 180

Query: 670  FAAGCFCELSDDFACVVLEILVSMVSSSEISKDIRMAGMRSLAKLGVSHELATRAYEAGX 491
            +AA CFCELSDDFA V+LEILV+M+SSS++   +R+AG+R  AK+G S  LA RAY+ G 
Sbjct: 181  YAAACFCELSDDFASVILEILVNMLSSSQMMSAVRLAGVRVFAKMGCSSSLAHRAYKVGL 240

Query: 490  XXXXXXXXXXXXXXXXXXXXXIAAKSTLLTSTQVKMLFSFLSQDKSFCLQATALKCLRFI 311
                                 +A+  + L S QV +L SFL+Q+K+  ++A A++CL FI
Sbjct: 241  KLLMDSSEEHFLVAMLISLSKLASIFSFLISEQVDLLCSFLTQEKTLHVKAMAIRCLHFI 300

Query: 310  LAGGPHTVHASADAIDTLLCKLNEFKMQPALRCVTLQILHKILLQNVFSFSYHDMLEVIS 131
                      SA  +  L   L++ ++   L+C  L+I HKI L ++   +  D+LE + 
Sbjct: 301  FIRSMCHFPVSAYIVKILFSMLDDPELPSDLQCQALRIFHKIALYSL--ANGRDILE-LD 357

Query: 130  KLLIIAEDGIQSSTFPDGVLSINLLIDVYSKFIRRADSEVDG 5
            KLL I ++  +S      +L I +L+D+  K   R     DG
Sbjct: 358  KLLTIVDNASKSPITLKQLLVIRVLVDISGKLRERIRIGSDG 399


>ref|XP_002867893.1| EMB1895 [Arabidopsis lyrata subsp. lyrata]
            gi|297313729|gb|EFH44152.1| EMB1895 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1134

 Score =  288 bits (738), Expect = 1e-75
 Identities = 165/397 (41%), Positives = 238/397 (59%), Gaps = 3/397 (0%)
 Frame = -2

Query: 1201 MEKIPAACAMEWSIELEKSLRSNKPGKSFEAIQKIGSNLEWWNSEDKLTMAEYNFFGLLP 1022
            MEK+ AACAMEWSI+LEKSLRS  P K+ EAI + G  LE W+ E +  +A YN FGL+P
Sbjct: 1    MEKVSAACAMEWSIKLEKSLRSKNPVKAVEAILETGEKLEQWSKEQESAIAVYNLFGLVP 60

Query: 1021 GEDQFYANAILLRLVDAFSFGDKQMKHCIVKLFMSEYKHRKKGKKNDGV---LSKGRFTN 851
             ED+ ++N ILLRLVDAF  GDK +K  +V++FMS +K  +    N+     LSK R  N
Sbjct: 61   EEDKLFSNTILLRLVDAFCVGDKLVKLAVVRVFMSMFKLSRGNNVNESAAWFLSKARVHN 120

Query: 850  YLEVLRRVKVVFEDGDVEVRSMALSLFGCWADFAHESAEIRYIILSTLVSSDILEVKASL 671
            +LE+L RVK V+E GD E +++AL LFGCW DFA E A +RY+I ++LVSS  LEV+++L
Sbjct: 121  HLEILIRVKNVYEKGDTEAKALALILFGCWRDFASEFAPVRYLIFTSLVSSHDLEVRSAL 180

Query: 670  FAAGCFCELSDDFACVVLEILVSMVSSSEISKDIRMAGMRSLAKLGVSHELATRAYEAGX 491
            FAA CFCE++DDFA VVL +L  MV   EI +  R+A +R  AK+G SH +A RA++   
Sbjct: 181  FAAACFCEVADDFALVVLGMLNDMVKFPEIMQKTRLAAVRVFAKMGCSHAIANRAFKICM 240

Query: 490  XXXXXXXXXXXXXXXXXXXXXIAAKSTLLTSTQVKMLFSFLSQDKSFCLQATALKCLRFI 311
                                 +A++ST L S   +++  FLS+DK+  ++A  L+CL F+
Sbjct: 241  KLMLDSPKEDNLIPFLVSLTKLASRSTHLASELTEVIMPFLSKDKTSHVRAAVLRCLHFL 300

Query: 310  LAGGPHTVHASADAIDTLLCKLNEFKMQPALRCVTLQILHKILLQNVFSFSYHDMLEVIS 131
            +  G     A    I ++   L +  +   ++   LQI  KIL   V+     D  E + 
Sbjct: 301  IERGMCFSLAHEREIASVSSLLKQEDLSSDMQLKALQIFQKIL---VYKLCMIDAFE-LH 356

Query: 130  KLLIIAEDGIQSSTFPDGVLSINLLIDVYSKFIRRAD 20
            +L+ I E+   S  F    L+I++L+ ++ +  R A+
Sbjct: 357  QLIAIVENASLSQIFSSSCLAISILVGIWKEIERTAE 393


>ref|NP_193739.1| integrator complex subunit 7 [Arabidopsis thaliana]
            gi|2827660|emb|CAA16614.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268801|emb|CAB79006.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332658868|gb|AEE84268.1| integrator complex subunit 7
            [Arabidopsis thaliana]
          Length = 1134

 Score =  280 bits (716), Expect = 5e-73
 Identities = 158/397 (39%), Positives = 238/397 (59%), Gaps = 3/397 (0%)
 Frame = -2

Query: 1201 MEKIPAACAMEWSIELEKSLRSNKPGKSFEAIQKIGSNLEWWNSEDKLTMAEYNFFGLLP 1022
            MEK+ AACAMEWSI+LEKSLRS    K+ EAI + G  LE W+ E +  +A YN FGL+P
Sbjct: 1    MEKVSAACAMEWSIKLEKSLRSKNSVKAVEAILETGGKLEQWSKEPESAIAVYNLFGLVP 60

Query: 1021 GEDQFYANAILLRLVDAFSFGDKQMKHCIVKLFMSEYKHRKKGKKNDGV---LSKGRFTN 851
             ED+ ++N ILLRLVDAF  GDK +K  +V++FMS +K  +    N+     LSKGR  N
Sbjct: 61   EEDKLFSNTILLRLVDAFCVGDKLIKLAVVRVFMSMFKLSRGKNVNESASWFLSKGRVHN 120

Query: 850  YLEVLRRVKVVFEDGDVEVRSMALSLFGCWADFAHESAEIRYIILSTLVSSDILEVKASL 671
            +LE+L RVK V++ GD E +++AL LFGCW DFA E A +RY++ S++VS   LE +++L
Sbjct: 121  HLELLTRVKNVYDKGDTESKALALILFGCWRDFASEFAPVRYLVFSSMVSPHDLEGRSAL 180

Query: 670  FAAGCFCELSDDFACVVLEILVSMVSSSEISKDIRMAGMRSLAKLGVSHELATRAYEAGX 491
            FAA CFCE++DDFA VVL +L  MV   +I+   R+A +R  AK+G SH +A RA++   
Sbjct: 181  FAAACFCEVADDFALVVLGMLNDMVKFPDITPKTRLAAVRVFAKMGCSHTIANRAFKICM 240

Query: 490  XXXXXXXXXXXXXXXXXXXXXIAAKSTLLTSTQVKMLFSFLSQDKSFCLQATALKCLRFI 311
                                 +A++ST L S   +++  FL +DK+   +A  L+CL F+
Sbjct: 241  KLMLDSPKEDNLVPFLVSLTKLASRSTHLASELAEVIIPFLGEDKTSHARAAVLRCLHFL 300

Query: 310  LAGGPHTVHASADAIDTLLCKLNEFKMQPALRCVTLQILHKILLQNVFSFSYHDMLEVIS 131
            +  G     A    I ++   L + ++   ++   LQI  KI+   V+     D  E++ 
Sbjct: 301  IERGMCFSLAHERDIASVSSLLKQEELSSDMQVKALQIFQKIV---VYKLCMTDASELL- 356

Query: 130  KLLIIAEDGIQSSTFPDGVLSINLLIDVYSKFIRRAD 20
            +L+ I E+   S  F    L+I++L+ ++++ +R A+
Sbjct: 357  QLIAITENASHSQIFSSSCLAISVLVSIWTEIVRTAE 393


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