BLASTX nr result

ID: Bupleurum21_contig00027137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027137
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]          146   1e-33
gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japoni...   144   7e-33
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   144   1e-32
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   144   1e-32
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   144   1e-32

>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
          Length = 1428

 Score =  146 bits (369), Expect = 1e-33
 Identities = 65/111 (58%), Positives = 87/111 (78%)
 Frame = +3

Query: 6   YQDCMAVCRRFGSPDLFITFTCNPQWPEIKLYCDKVPHSDPANRPDVLARVFKIKLDLLL 185
           Y D MA+C+ FG PDLFITFTCNP+WPEI  YC+K   +   +RPD++AR+FKIKLD L+
Sbjct: 372 YYDAMAICKHFGFPDLFITFTCNPKWPEITRYCEKRGLTAD-DRPDIVARIFKIKLDSLM 430

Query: 186 EDLTENHVLGKVIGVAYTIEFQKRGLPHAHIIVWLEESDKCHSTDDIDQLI 338
           +DLTE H+LGK +   YT+EFQKRGLPHAHI++++  + K  + DDID++I
Sbjct: 431 KDLTERHLLGKTVASMYTVEFQKRGLPHAHILLFMAANSKLPTADDIDKII 481


>gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japonica Group]
           gi|31432486|gb|AAP54108.1| AT hook motif-containing
           protein, putative [Oryza sativa Japonica Group]
          Length = 1573

 Score =  144 bits (363), Expect = 7e-33
 Identities = 61/113 (53%), Positives = 83/113 (73%)
 Frame = +3

Query: 3   NYQDCMAVCRRFGSPDLFITFTCNPQWPEIKLYCDKVPHSDPANRPDVLARVFKIKLDLL 182
           NYQD MA+CR  G+PDLF+TFTCNP+WPEI+   +KV H  P+ RPD++ RVF IKL  L
Sbjct: 546 NYQDAMAICRWAGNPDLFVTFTCNPKWPEIQCMLEKVGHQKPSERPDIVVRVFMIKLREL 605

Query: 183 LEDLTENHVLGKVIGVAYTIEFQKRGLPHAHIIVWLEESDKCHSTDDIDQLIC 341
           + D+  N   GK   + +TIEFQK+GLPHAHI+++L++ +KC     ID++IC
Sbjct: 606 MSDIKRNQHFGKTKAIIFTIEFQKKGLPHAHILIFLDKKEKCLKPSQIDKMIC 658


>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score =  144 bits (362), Expect = 1e-32
 Identities = 62/112 (55%), Positives = 83/112 (74%)
 Frame = +3

Query: 3   NYQDCMAVCRRFGSPDLFITFTCNPQWPEIKLYCDKVPHSDPANRPDVLARVFKIKLDLL 182
           NYQD MA+CR FG+PD+F+TFT NP+WPEI+    K+P     +RPD+  RVFK+KLD L
Sbjct: 383 NYQDAMAICRTFGNPDIFMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQL 442

Query: 183 LEDLTENHVLGKVIGVAYTIEFQKRGLPHAHIIVWLEESDKCHSTDDIDQLI 338
           ++ + E    GK+I   YTIEFQKRGLPHAHI++WL  S+K  + +DID++I
Sbjct: 443 MKHIVEGQYFGKIISAIYTIEFQKRGLPHAHILLWLHPSNKYPTPEDIDKII 494


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  144 bits (362), Expect = 1e-32
 Identities = 62/112 (55%), Positives = 83/112 (74%)
 Frame = +3

Query: 3   NYQDCMAVCRRFGSPDLFITFTCNPQWPEIKLYCDKVPHSDPANRPDVLARVFKIKLDLL 182
           NYQD MA+CR FG+PD+F+TFT NP+WPEI+    K+P     +RPD+  RVFK+KLD L
Sbjct: 383 NYQDAMAICRTFGNPDIFMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQL 442

Query: 183 LEDLTENHVLGKVIGVAYTIEFQKRGLPHAHIIVWLEESDKCHSTDDIDQLI 338
           ++ + E    GK+I   YTIEFQKRGLPHAHI++WL  S+K  + +DID++I
Sbjct: 443 MKHIVEGQYFGKIISAIYTIEFQKRGLPHAHILLWLHPSNKYPTPEDIDKII 494


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1531

 Score =  144 bits (362), Expect = 1e-32
 Identities = 62/112 (55%), Positives = 83/112 (74%)
 Frame = +3

Query: 3   NYQDCMAVCRRFGSPDLFITFTCNPQWPEIKLYCDKVPHSDPANRPDVLARVFKIKLDLL 182
           NYQD MA+CR FG+PD+F+TFT NP+WPEI+    K+P     +RPD+  RVFK+KLD L
Sbjct: 356 NYQDAMAICRTFGNPDIFMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQL 415

Query: 183 LEDLTENHVLGKVIGVAYTIEFQKRGLPHAHIIVWLEESDKCHSTDDIDQLI 338
           ++ + E    GK+I   YTIEFQKRGLPHAHI++WL  S+K  + +DID++I
Sbjct: 416 MKHIVEGQYFGKIISAIYTIEFQKRGLPHAHILLWLHPSNKYPTPEDIDKII 467


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