BLASTX nr result

ID: Bupleurum21_contig00027124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027124
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi...   131   7e-29
gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japo...   131   7e-29
gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indi...   131   7e-29
ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group] g...   131   7e-29
ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28

>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 832

 Score =  131 bits (329), Expect = 7e-29
 Identities = 60/96 (62%), Positives = 78/96 (81%)
 Frame = -1

Query: 342 RSDVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVVD 163
           R D+VSYTSL+NAYGRSQ+P KA ++F  MK+N  KPNLV+YNAL+DAYGSNG +A+ + 
Sbjct: 395 RPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIK 454

Query: 162 LIHVMEQEGVQPNIVSISTLLAACDRCCQKGELPLV 55
           ++  MEQEG+QPN+VSI TLLAAC RC +K ++  V
Sbjct: 455 ILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTV 490



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/84 (38%), Positives = 48/84 (57%)
 Frame = -1

Query: 336 DVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVVDLI 157
           DVV++TS+++ Y    Q E     F  M     KPN+V+YNAL+ AY + G   E     
Sbjct: 327 DVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFF 386

Query: 156 HVMEQEGVQPNIVSISTLLAACDR 85
           + ++Q G +P+IVS ++LL A  R
Sbjct: 387 NEIKQNGFRPDIVSYTSLLNAYGR 410


>gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
          Length = 665

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = -1

Query: 345 LRSDVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVV 166
           LR D+VSYTSL+NAYGRS QPEKA EVF  MKKN+ KPN V+YNAL+DAYGS G + E V
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAV 313

Query: 165 DLIHVMEQEGVQPNIVSISTLLAACDRCCQ 76
            L+H ME++G+QP++VSISTLLAAC RC Q
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLAACGRCRQ 343



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/87 (39%), Positives = 54/87 (62%)
 Frame = -1

Query: 336 DVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVVDLI 157
           DVV+YTS++++Y    Q E    +F  M     KPN+V YN+LL AY S G   E + + 
Sbjct: 187 DVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIF 246

Query: 156 HVMEQEGVQPNIVSISTLLAACDRCCQ 76
           +++++ G++P+IVS ++LL A  R  Q
Sbjct: 247 NLIKKNGLRPDIVSYTSLLNAYGRSAQ 273


>gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
          Length = 583

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = -1

Query: 345 LRSDVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVV 166
           LR D+VSYTSL+NAYGRS QPEKA EVF  MKKN+ KPN V+YNAL+DAYGS G + E V
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAV 313

Query: 165 DLIHVMEQEGVQPNIVSISTLLAACDRCCQ 76
            L+H ME++G+QP++VSISTLLAAC RC Q
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLAACGRCRQ 343



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/87 (39%), Positives = 54/87 (62%)
 Frame = -1

Query: 336 DVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVVDLI 157
           DVV+YTS++++Y    Q E    +F  M     KPN+V YN+LL AY S G   E + + 
Sbjct: 187 DVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIF 246

Query: 156 HVMEQEGVQPNIVSISTLLAACDRCCQ 76
           +++++ G++P+IVS ++LL A  R  Q
Sbjct: 247 NLIKKNGLRPDIVSYTSLLNAYGRSAQ 273


>ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
           gi|215767816|dbj|BAH00045.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa
           Japonica Group]
          Length = 677

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = -1

Query: 345 LRSDVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVV 166
           LR D+VSYTSL+NAYGRS QPEKA EVF  MKKN+ KPN V+YNAL+DAYGS G + E V
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAV 313

Query: 165 DLIHVMEQEGVQPNIVSISTLLAACDRCCQ 76
            L+H ME++G+QP++VSISTLLAAC RC Q
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLAACGRCRQ 343



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/87 (39%), Positives = 54/87 (62%)
 Frame = -1

Query: 336 DVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVVDLI 157
           DVV+YTS++++Y    Q E    +F  M     KPN+V YN+LL AY S G   E + + 
Sbjct: 187 DVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIF 246

Query: 156 HVMEQEGVQPNIVSISTLLAACDRCCQ 76
           +++++ G++P+IVS ++LL A  R  Q
Sbjct: 247 NLIKKNGLRPDIVSYTSLLNAYGRSAQ 273


>ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|222854915|gb|EEE92462.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/97 (62%), Positives = 80/97 (82%)
 Frame = -1

Query: 345 LRSDVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVV 166
           LR DVVSYTSL+N+YGRSQQP+KA EVF+ MK++  KPN+V+YNA++DAYGSNG +AE V
Sbjct: 378 LRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAV 437

Query: 165 DLIHVMEQEGVQPNIVSISTLLAACDRCCQKGELPLV 55
           +++  MEQ+G+ PN VSI TLLAAC RC +K  + +V
Sbjct: 438 EVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVV 474



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/87 (35%), Positives = 53/87 (60%)
 Frame = -1

Query: 336 DVVSYTSLVNAYGRSQQPEKATEVFKAMKKNNWKPNLVTYNALLDAYGSNGHIAEVVDLI 157
           DVV++TS+++ Y  + Q E    VF  M     KPN+V+YN L+ AY S+G   E + + 
Sbjct: 311 DVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVF 370

Query: 156 HVMEQEGVQPNIVSISTLLAACDRCCQ 76
           + ++  G++P++VS ++LL +  R  Q
Sbjct: 371 NAIKNSGLRPDVVSYTSLLNSYGRSQQ 397


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