BLASTX nr result

ID: Bupleurum21_contig00027120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027120
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284010.1| PREDICTED: uncharacterized protein LOC100262...    67   2e-09
ref|XP_002311488.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002315899.1| predicted protein [Populus trichocarpa] gi|1...    59   3e-07
ref|XP_002268613.1| PREDICTED: uncharacterized protein LOC100258...    55   5e-06
emb|CAN67693.1| hypothetical protein VITISV_035607 [Vitis vinifera]    55   5e-06

>ref|XP_002284010.1| PREDICTED: uncharacterized protein LOC100262828 [Vitis vinifera]
          Length = 181

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 10/82 (12%)
 Frame = -1

Query: 334 ASSAPKRIGGNVHNNKGRVLPES----------VEGLPENEIEGSRLNLDEVEGYSTAEI 185
           A+SA KRI G     K R+LPES               ENE   SRLNLDEVEG+  +E 
Sbjct: 101 ANSAAKRISGG----KVRILPESGGDGSEEVAVATAAVENEAGCSRLNLDEVEGFPVSEY 156

Query: 184 RFRLAVCRSKKPSLDTITEEPM 119
           ++RLA+ RSKKP L+TI EEP+
Sbjct: 157 KYRLAMFRSKKPLLETIREEPV 178


>ref|XP_002311488.1| predicted protein [Populus trichocarpa] gi|222851308|gb|EEE88855.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
 Frame = -1

Query: 334 ASSAPKRIGGNVHNNKGRVLPESV------EGLPENEIEGSRLNLDEVEGYSTAEIRFRL 173
           A+SA +RI G   NN  RVLPES       E    +E   +RL+L+EVEG+   E ++RL
Sbjct: 101 ANSAARRISGG--NNITRVLPESGGDQNARESPKGSENGAARLSLEEVEGFPLPEYKYRL 158

Query: 172 AVCRSKKPSLDTITEEPM 119
           + CRS+KP L+TI EEP+
Sbjct: 159 SSCRSRKPMLETINEEPV 176


>ref|XP_002315899.1| predicted protein [Populus trichocarpa] gi|118487599|gb|ABK95625.1|
           unknown [Populus trichocarpa]
           gi|222864939|gb|EEF02070.1| predicted protein [Populus
           trichocarpa]
          Length = 178

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
 Frame = -1

Query: 334 ASSAPKRIGGNVHNNKGRVLPES------VEGLPENEIEGSRLNLDEVEGYSTAEIRFRL 173
           A+SA KRI G    N  RVLPES       E L   +   +RL+L+ VE +   E ++RL
Sbjct: 101 ANSAAKRISGG---NSNRVLPESGGDQNVQESLEGRDNGAARLSLEGVEDFPAPEYKYRL 157

Query: 172 AVCRSKKPSLDTITEEPM 119
           + CRS+KP L+TI EEP+
Sbjct: 158 SCCRSRKPMLETIKEEPV 175


>ref|XP_002268613.1| PREDICTED: uncharacterized protein LOC100258732 [Vitis vinifera]
          Length = 177

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
 Frame = -1

Query: 283 RVLPESVEG---LPENEIEGS---RLNLDEVEGYSTAEIRFRLAVCRSKKPSLDTITEEP 122
           R+L ES  G   +P    E +   RLNL+++E YST E + RL++CRSKKP L+TI EEP
Sbjct: 114 RLLAESGRGSQIMPSPAAENAGETRLNLEDIEEYSTPEFKHRLSMCRSKKPLLETIAEEP 173

Query: 121 M 119
           +
Sbjct: 174 L 174


>emb|CAN67693.1| hypothetical protein VITISV_035607 [Vitis vinifera]
          Length = 164

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 6/61 (9%)
 Frame = -1

Query: 283 RVLPESVEG---LPENEIEGS---RLNLDEVEGYSTAEIRFRLAVCRSKKPSLDTITEEP 122
           R+L ES  G   +P    E +   RLNL+++E YST E + RL++CRSKKP L+TI EEP
Sbjct: 101 RLLAESGRGSQIMPSPAAENAGETRLNLEDIEEYSTXEFKHRLSMCRSKKPLLETIAEEP 160

Query: 121 M 119
           +
Sbjct: 161 L 161


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