BLASTX nr result

ID: Bupleurum21_contig00027114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027114
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276253.2| PREDICTED: uncharacterized protein LOC100254...   202   2e-50
emb|CBI24671.3| unnamed protein product [Vitis vinifera]              202   2e-50
ref|XP_002530590.1| membrane associated ring finger 1,8, putativ...   183   1e-44
ref|XP_002330704.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
ref|XP_002325598.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33

>ref|XP_002276253.2| PREDICTED: uncharacterized protein LOC100254146 [Vitis vinifera]
          Length = 304

 Score =  202 bits (514), Expect = 2e-50
 Identities = 96/139 (69%), Positives = 107/139 (76%)
 Frame = +1

Query: 1   WCNKKGDITCEICNQVFSPSYEIPPAKNNPDGMAIDIRQAWGGHIDLRDSQFLAFAAAER 180
           WCNKKGD TCEICNQVFSP+Y +PP ++NPD MAIDIRQAWG HIDLRD  FLA AAAER
Sbjct: 102 WCNKKGDTTCEICNQVFSPNYSLPPGRSNPDVMAIDIRQAWGPHIDLRDPHFLALAAAER 161

Query: 181 QFLQAEYEEYAVANSGSMTFFRSVVXXXXXXXXXXXXXXXTRDSGLMQESSSFFNIQISL 360
           Q LQ+EYE+YAVAN+GS+   RSV                TRDSG++QESS FFN QISL
Sbjct: 162 QLLQSEYEDYAVANTGSIACLRSVALILLIVLLIRQALMVTRDSGMVQESSIFFNFQISL 221

Query: 361 LQLAGFLLPCYAMARSWYM 417
           LQ AGFLLPCY MARSWY+
Sbjct: 222 LQFAGFLLPCYVMARSWYI 240


>emb|CBI24671.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  202 bits (514), Expect = 2e-50
 Identities = 96/139 (69%), Positives = 107/139 (76%)
 Frame = +1

Query: 1   WCNKKGDITCEICNQVFSPSYEIPPAKNNPDGMAIDIRQAWGGHIDLRDSQFLAFAAAER 180
           WCNKKGD TCEICNQVFSP+Y +PP ++NPD MAIDIRQAWG HIDLRD  FLA AAAER
Sbjct: 44  WCNKKGDTTCEICNQVFSPNYSLPPGRSNPDVMAIDIRQAWGPHIDLRDPHFLALAAAER 103

Query: 181 QFLQAEYEEYAVANSGSMTFFRSVVXXXXXXXXXXXXXXXTRDSGLMQESSSFFNIQISL 360
           Q LQ+EYE+YAVAN+GS+   RSV                TRDSG++QESS FFN QISL
Sbjct: 104 QLLQSEYEDYAVANTGSIACLRSVALILLIVLLIRQALMVTRDSGMVQESSIFFNFQISL 163

Query: 361 LQLAGFLLPCYAMARSWYM 417
           LQ AGFLLPCY MARSWY+
Sbjct: 164 LQFAGFLLPCYVMARSWYI 182


>ref|XP_002530590.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223529889|gb|EEF31820.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 370

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/139 (64%), Positives = 106/139 (76%)
 Frame = +1

Query: 1   WCNKKGDITCEICNQVFSPSYEIPPAKNNPDGMAIDIRQAWGGHIDLRDSQFLAFAAAER 180
           WCNKKGDITCEICNQVFSP+Y +PPA+++PD MAI+IRQAWG HIDLRDS  LA AAAER
Sbjct: 104 WCNKKGDITCEICNQVFSPNYSVPPARSSPDVMAIEIRQAWGQHIDLRDSHLLALAAAER 163

Query: 181 QFLQAEYEEYAVANSGSMTFFRSVVXXXXXXXXXXXXXXXTRDSGLMQESSSFFNIQISL 360
           Q LQAEYEEYAVAN+ ++   RSV                TRD+G++QE SS +N+Q+S 
Sbjct: 164 QLLQAEYEEYAVANTSTIACLRSVALILLVLLLLSQALLATRDAGMVQE-SSLYNLQVS- 221

Query: 361 LQLAGFLLPCYAMARSWYM 417
           L+ AG LLPCY MARSWY+
Sbjct: 222 LRFAGLLLPCYVMARSWYI 240


>ref|XP_002330704.1| predicted protein [Populus trichocarpa] gi|222872308|gb|EEF09439.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  181 bits (458), Expect = 7e-44
 Identities = 90/139 (64%), Positives = 102/139 (73%)
 Frame = +1

Query: 1   WCNKKGDITCEICNQVFSPSYEIPPAKNNPDGMAIDIRQAWGGHIDLRDSQFLAFAAAER 180
           WCNKKGDITCEICNQVFSP+Y +PPA+ NPD MAIDIRQAWG HIDL DS  LA    E 
Sbjct: 39  WCNKKGDITCEICNQVFSPNYSLPPARINPDVMAIDIRQAWGHHIDLHDSHLLAL---EH 95

Query: 181 QFLQAEYEEYAVANSGSMTFFRSVVXXXXXXXXXXXXXXXTRDSGLMQESSSFFNIQISL 360
           Q LQ+EYE+YAVANS S+   RSV                TRDSG++QESS+FF+  +SL
Sbjct: 96  QLLQSEYEDYAVANSSSIACLRSVALILLIILLLRQALMVTRDSGMVQESSTFFS--VSL 153

Query: 361 LQLAGFLLPCYAMARSWYM 417
           LQ AGFLLPCY MARSWY+
Sbjct: 154 LQFAGFLLPCYVMARSWYI 172


>ref|XP_002325598.1| predicted protein [Populus trichocarpa] gi|222862473|gb|EEE99979.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  144 bits (364), Expect = 6e-33
 Identities = 75/132 (56%), Positives = 90/132 (68%)
 Frame = +1

Query: 25  TCEICNQVFSPSYEIPPAKNNPDGMAIDIRQAWGGHIDLRDSQFLAFAAAERQFLQAEYE 204
           +C    +VFSP+Y +PPA++NPD +AIDIRQAWG HIDL DS  LA    E Q LQ+EYE
Sbjct: 21  SCNGTLKVFSPNYSLPPARSNPDVIAIDIRQAWGHHIDLHDSHLLAL---EHQLLQSEYE 77

Query: 205 EYAVANSGSMTFFRSVVXXXXXXXXXXXXXXXTRDSGLMQESSSFFNIQISLLQLAGFLL 384
           +YAV N+ S+   RSV                TRDSG++QE+SSFF   ISLLQ AGFLL
Sbjct: 78  DYAVTNTSSLACLRSVALILLIILLLRQALMVTRDSGMVQETSSFFG--ISLLQFAGFLL 135

Query: 385 PCYAMARSWYMA 420
           PCY MARSWY+A
Sbjct: 136 PCYVMARSWYIA 147


Top