BLASTX nr result

ID: Bupleurum21_contig00027076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027076
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis] gi...    98   6e-19
ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]      86   2e-15
emb|CBI35491.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002306685.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12

>ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis]
           gi|223534513|gb|EEF36212.1| Protein MKS1, putative
           [Ricinus communis]
          Length = 254

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 59/148 (39%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
 Frame = -1

Query: 484 TSSSSSNYFMQDSTGAISPAARYASIEKIKSPEGKKMLQLQQNSYVQMLDGVDLSGDIDK 305
           TS SSSN F  D +GAISPAAR+A+IEK KSP      Q+Q +  V   +G+++S  +++
Sbjct: 109 TSYSSSNPF-NDYSGAISPAARFATIEKAKSPNENMKQQVQPSGDVGFFEGIEMSQVMER 167

Query: 304 ITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHDLSPVLHSSRNFNIEGSFLPSPS 125
                                               HDLSP LH +R+F +EG+F+PSPS
Sbjct: 168 SGNLFHGILSPAPSSLPPISPNFFSPPSDPNMMSFLHDLSPALHGNRSF-LEGTFMPSPS 226

Query: 124 NNLFSPNITFSPSPSVDLFNNF---FDF 50
               SP +T SP+PS+DLFNNF   FD+
Sbjct: 227 TTFLSPRLTASPTPSLDLFNNFNNIFDY 254


>ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]
          Length = 218

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
 Frame = -1

Query: 481 SSSSSNYFMQDSTGAISPAARYASIEKIK-SPEGKKMLQLQQNSYVQMLDGVDLSGDIDK 305
           SSSSS+    DS GA+SPAAR+ASIEK K S E +K  ++Q +  V +++G+++ G +++
Sbjct: 78  SSSSSSSAPLDS-GAVSPAARFASIEKTKVSAEEEKKKKMQSSGDVDVVEGIEIGGGVER 136

Query: 304 ITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHDLSPVLHSSRNFNIEGSFLPSPS 125
            +G                                FHD SP +H ++N+ IEGSF+PSPS
Sbjct: 137 -SGWFPGILSPGPSSLPAISPNFFSPGFDPYSLNIFHDFSPAVHGNKNY-IEGSFMPSPS 194

Query: 124 NNLFSPNITFSPSPSVDLFNNFFDF 50
             L +P+   SP+ S+DLFNNF DF
Sbjct: 195 TFLSTPH-NPSPTASLDLFNNFLDF 218


>emb|CBI35491.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
 Frame = -1

Query: 481 SSSSSNYFMQDSTGAISPAARYASIEKIK-SPEGKKMLQLQQNSYVQMLDGVDLSGDIDK 305
           SSSSS+    DS GA+SPAAR+ASIEK K S E +K  ++Q +  V +++G+++ G +++
Sbjct: 90  SSSSSSSAPLDS-GAVSPAARFASIEKTKVSAEEEKKKKMQSSGDVDVVEGIEIGGGVER 148

Query: 304 ITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHDLSPVLHSSRNFNIEGSFLPSPS 125
            +G                                FHD SP +H ++N+ IEGSF+PSPS
Sbjct: 149 -SGWFPGILSPGPSSLPAISPNFFSPGFDPYSLNIFHDFSPAVHGNKNY-IEGSFMPSPS 206

Query: 124 NNLFSPNITFSPSPSVDLFNNFFDF 50
             L +P+   SP+ S+DLFNNF DF
Sbjct: 207 TFLSTPH-NPSPTASLDLFNNFLDF 230


>ref|XP_002306685.1| predicted protein [Populus trichocarpa] gi|222856134|gb|EEE93681.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 60/153 (39%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
 Frame = -1

Query: 487 TTSSSSSNYFMQDSTGAISPAARYASIEKIKSPEGKKMLQLQQNSYVQMLDGV-DLSGDI 311
           +++S+SSN F     GAISPAARYA+IEK KSP  K  L+ Q    V  ++G+ ++   +
Sbjct: 93  SSTSTSSNPFNDHDCGAISPAARYATIEKAKSP--KDQLKQQLGGDVGFVEGIMEIDQVM 150

Query: 310 DKITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHDLSPVLHSSRNFNIEGSFLPS 131
           ++                                   FHDLSP+LH +RNF IEGSF+PS
Sbjct: 151 ERTNLGPGILSPGPASLPPIPPNFFSPASADPNSVSFFHDLSPILHGNRNF-IEGSFMPS 209

Query: 130 PSNNLFSPNITFSPSPSVDLFNNF------FDF 50
           PS   FSP+     +PS+DLFNNF      FDF
Sbjct: 210 PS-TFFSPS-----TPSIDLFNNFNTYNNLFDF 236


>ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|222843914|gb|EEE81461.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
 Frame = -1

Query: 487 TTSSSSSNYFMQDSTGAISPAARYASIEKIKSPEGKKMLQLQQNSYVQMLDGVDLSGDID 308
           +++S+SSN F  D  GAISPAAR+A+IEK  SP+ ++  Q Q    +  ++G+    +ID
Sbjct: 118 SSTSTSSNPF-NDDCGAISPAARFATIEKANSPKDQQKQQ-QLGGDLGYVEGIM---EID 172

Query: 307 KITGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF-HDLSPVLHSSRNFNIEGSFLPS 131
           ++                                  F HDLSP+LH +RNF IEGSF+PS
Sbjct: 173 RVMERPSLGPGILSPGPASLPPIPPNFFSPDQNSVSFFHDLSPILHGNRNF-IEGSFMPS 231

Query: 130 PSNNLFSPNITFSPSPSVDLFNNF------FDF 50
           PS  ++ P I    +PS DLFNNF      FDF
Sbjct: 232 PSTFVW-PRINSPSTPSTDLFNNFNAYNNLFDF 263


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