BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027073
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   312   5e-83
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]   312   5e-83
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   276   3e-72
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi...   270   3e-70
ref|NP_197146.1| pentatricopeptide repeat-containing protein [Ar...   246   3e-63

>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
           gi|296089757|emb|CBI39576.3| unnamed protein product
           [Vitis vinifera]
          Length = 586

 Score =  312 bits (799), Expect = 5e-83
 Identities = 149/224 (66%), Positives = 178/224 (79%), Gaps = 4/224 (1%)
 Frame = +2

Query: 50  FHLSAVTRALSTAA----DPFLAHPSHTHLSTIKTKDQLLKSYTITPPIKPWPQNLYPKR 217
           FH  +  R+ STA     DPF  HPSH HL+ + +K  LLKSYT+TPPIKPWPQ L PKR
Sbjct: 44  FHSISAVRSASTAVGAAVDPFTDHPSHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSPKR 103

Query: 218 LVSMITSQQNLDLALQIFDHAGKYHPNFQHNYETYHAIINKLARARAFEPMEKLLSELQK 397
           +VSMI+ QQNLDLALQIFDHAGK+H NF HNYETY A+I KL++ARAFEPME L+S+L K
Sbjct: 104 VVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHK 163

Query: 398 LGIRCGENLFIVVIRNYGIASRPTQAFEMFLRIKDFGVETSVRSFNTLLNALIQNKRYKL 577
             I+CGENLFI VIRNYG A RP  A   FLRI  FG++ SVRSFNTLLN L+QNKR+ L
Sbjct: 164 SQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDL 223

Query: 578 VYMLFKNCKKKFNIVPNVFTCNILLKGFCKNDDIEGALKVLDEM 709
           V+++FKNC+KKF IVPNVFTCNIL+K  CK +DI+ A++VL+EM
Sbjct: 224 VHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEM 267


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  312 bits (799), Expect = 5e-83
 Identities = 149/224 (66%), Positives = 178/224 (79%), Gaps = 4/224 (1%)
 Frame = +2

Query: 50  FHLSAVTRALSTAA----DPFLAHPSHTHLSTIKTKDQLLKSYTITPPIKPWPQNLYPKR 217
           FH  +  R+ STA     DPF  HPSH HL+ + +K  LLKSYT+TPPIKPWPQ L PKR
Sbjct: 44  FHSISAVRSASTAVGAAVDPFTDHPSHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSPKR 103

Query: 218 LVSMITSQQNLDLALQIFDHAGKYHPNFQHNYETYHAIINKLARARAFEPMEKLLSELQK 397
           +VSMI+ QQNLDLALQIFDHAGK+H NF HNYETY A+I KL++ARAFEPME L+S+L K
Sbjct: 104 VVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHK 163

Query: 398 LGIRCGENLFIVVIRNYGIASRPTQAFEMFLRIKDFGVETSVRSFNTLLNALIQNKRYKL 577
             I+CGENLFI VIRNYG A RP  A   FLRI  FG++ SVRSFNTLLN L+QNKR+ L
Sbjct: 164 SQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDL 223

Query: 578 VYMLFKNCKKKFNIVPNVFTCNILLKGFCKNDDIEGALKVLDEM 709
           V+++FKNC+KKF IVPNVFTCNIL+K  CK +DI+ A++VL+EM
Sbjct: 224 VHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEM 267


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  276 bits (706), Expect = 3e-72
 Identities = 129/194 (66%), Positives = 158/194 (81%)
 Frame = +2

Query: 128 STIKTKDQLLKSYTITPPIKPWPQNLYPKRLVSMITSQQNLDLALQIFDHAGKYHPNFQH 307
           ST    + L +SYT+TPPIKPWPQ LYPKRLVSMIT QQNLDLALQIF++AGKY PNF H
Sbjct: 34  STGSPNNPLPESYTVTPPIKPWPQRLYPKRLVSMITRQQNLDLALQIFEYAGKYQPNFSH 93

Query: 308 NYETYHAIINKLARARAFEPMEKLLSELQKLGIRCGENLFIVVIRNYGIASRPTQAFEMF 487
           NY+TY +II+KL+RAR F P+E LLS+L K  I+CGEN+FI VIRNYG+A +P  A   F
Sbjct: 94  NYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTF 153

Query: 488 LRIKDFGVETSVRSFNTLLNALIQNKRYKLVYMLFKNCKKKFNIVPNVFTCNILLKGFCK 667
           +RI+DF V+ SVRS NTLLNA +QNKRY LV+ +FKNC+ K+ ++PNVFTCNIL+K  CK
Sbjct: 154 IRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCK 213

Query: 668 NDDIEGALKVLDEM 709
            +D+E A+KVLDEM
Sbjct: 214 KNDVESAVKVLDEM 227


>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
           gi|449492939|ref|XP_004159147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  270 bits (689), Expect = 3e-70
 Identities = 131/203 (64%), Positives = 157/203 (77%), Gaps = 5/203 (2%)
 Frame = +2

Query: 116 HTHLSTIKTK-----DQLLKSYTITPPIKPWPQNLYPKRLVSMITSQQNLDLALQIFDHA 280
           HT +S +  +     +  L+SYT+TPPIKPWPQ L+P RLV+MI  QQNLDLALQIF +A
Sbjct: 16  HTPISIVPLRFIFAVETPLQSYTVTPPIKPWPQRLFPNRLVAMIRRQQNLDLALQIFHYA 75

Query: 281 GKYHPNFQHNYETYHAIINKLARARAFEPMEKLLSELQKLGIRCGENLFIVVIRNYGIAS 460
           GKYHP F HNY+TYHAII +L+RARAFEP+E LL ELQ  GI C E+LFI VIR+YG+AS
Sbjct: 76  GKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLAS 135

Query: 461 RPTQAFEMFLRIKDFGVETSVRSFNTLLNALIQNKRYKLVYMLFKNCKKKFNIVPNVFTC 640
           RP  A + FLRI+ FGV  SVRS NTLLNAL+QN R+  V++LFK  K KF +VPNVFTC
Sbjct: 136 RPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTC 195

Query: 641 NILLKGFCKNDDIEGALKVLDEM 709
           NIL+K  CK +D+EGA KV DEM
Sbjct: 196 NILIKALCKKNDVEGARKVFDEM 218


>ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
           gi|9759124|dbj|BAB09609.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332004907|gb|AED92290.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 535

 Score =  246 bits (629), Expect = 3e-63
 Identities = 124/217 (57%), Positives = 159/217 (73%), Gaps = 2/217 (0%)
 Frame = +2

Query: 65  VTRALSTAADPFLAHPSHTHLSTIKTKDQLLKSYTITPPIKPWPQNLYPKRLVSMITSQQ 244
           ++R   T   PF+A  S    S   +   L +  T  PPIKPWPQ L+PKRLVSMIT QQ
Sbjct: 3   LSRVNPTRFPPFVA--SRRLFSASASAASLQQYCTEKPPIKPWPQRLFPKRLVSMITQQQ 60

Query: 245 NLDLALQIFDHAGKYHPNFQHNYETYHAIINKLARARAFEPMEKLLSELQKL--GIRCGE 418
           N+DLALQIF +AGK HP F HNY+TYH+I+ KL+RARAF+P+E L+++L+     I+CGE
Sbjct: 61  NIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGE 120

Query: 419 NLFIVVIRNYGIASRPTQAFEMFLRIKDFGVETSVRSFNTLLNALIQNKRYKLVYMLFKN 598
           NLFI ++RNYG+A R   +  +FLRI DFGV+ SVRS NTLLN LIQN+R+ LV+ +FKN
Sbjct: 121 NLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN 180

Query: 599 CKKKFNIVPNVFTCNILLKGFCKNDDIEGALKVLDEM 709
            K+ F I PN+FTCN+L+K  CK +DIE A KVLDE+
Sbjct: 181 SKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI 217