BLASTX nr result

ID: Bupleurum21_contig00027069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027069
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]      85   7e-15
ref|XP_002323197.1| predicted protein [Populus trichocarpa] gi|1...    70   2e-10
gb|AFK40687.1| unknown [Medicago truncatula]                           69   3e-10
ref|XP_003624799.1| Ubiquitin carrier protein [Medicago truncatu...    69   3e-10
ref|NP_001239955.1| uncharacterized protein LOC100811067 [Glycin...    67   2e-09

>gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]
          Length = 270

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 10/125 (8%)
 Frame = +3

Query: 3   EYARHARIFTATHAVNPKRAIFKTGAMPESNTDVNV---------VNQKNSVTGASVHLQ 155
           EYARHAR++T  HA+  K   FK+GA+ ES T +NV         V++K + +GA++ L 
Sbjct: 142 EYARHARLYTGIHALKQKPK-FKSGAISESTTALNVDQSNTSVLNVDEKKASSGAALPLP 200

Query: 156 PSAASSISNARATTGQDQLIAAPNSMVKTEGGVASATVA-PAPVMQTKEVHATSKVQADK 332
              AS+ +  +   GQDQ  +A NS   TE GV+S +VA P PV Q KEV   +KVQADK
Sbjct: 201 SPLASTTTFTKGGNGQDQPASALNST--TETGVSSDSVAAPPPVTQKKEV-TLAKVQADK 257

Query: 333 KKVDA 347
           KK+DA
Sbjct: 258 KKMDA 262


>ref|XP_002323197.1| predicted protein [Populus trichocarpa] gi|118484859|gb|ABK94296.1|
           unknown [Populus trichocarpa]
           gi|222867827|gb|EEF04958.1| predicted protein [Populus
           trichocarpa]
          Length = 264

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 51/119 (42%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
 Frame = +3

Query: 3   EYARHARIFTATHAVNPKRAIFKTGAMPES----NTDVNVVNQKNSVTGASVHLQPSAAS 170
           EYARHARI+T  HA  PK   FKTGA+ ES    N D ++ +QK+   GA V LQ   A 
Sbjct: 144 EYARHARIYTGIHA-KPKPK-FKTGAISESTTALNVDQSIGDQKSVAVGAVVPLQSPLAP 201

Query: 171 SISNARATTGQDQLIAAPNSMVKTEGGVASATVAPAPVMQTKEVHATSKVQADKKKVDA 347
             + ++    QDQ  A   +    E G++ +  AP P    K+V  T KVQA KKK+DA
Sbjct: 202 CTTASKVGNSQDQPAAVGPT---HETGMSGSVAAPTPSTLKKDVGLT-KVQAGKKKMDA 256


>gb|AFK40687.1| unknown [Medicago truncatula]
          Length = 207

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
 Frame = +3

Query: 3   EYARHARIFTATHAVNPKRAIFKTGAMPESNTDVNVVNQKNSVTGASVHLQPSAAS---- 170
           EYARHAR+ T  HA  PK   FK+GA+ ES T +NV     SV  + +   PS A+    
Sbjct: 82  EYARHARLLTGIHA-KPKPK-FKSGAITESTTALNVDQTNTSVLNSDIKTMPSGAALPPL 139

Query: 171 --SISNARATTGQDQLIAAPNSMVKTEGGVASATVAPAPVMQTKEVHATSKVQADKKKVD 344
              ++     TGQDQ +    +        A+A V+ A   Q +++  T+K QADKKK+D
Sbjct: 140 SLPLTTGARGTGQDQAVVGVLTESSANVSSAAAVVSAAHAPQKRDI-GTAKAQADKKKLD 198

Query: 345 A 347
           A
Sbjct: 199 A 199


>ref|XP_003624799.1| Ubiquitin carrier protein [Medicago truncatula]
           gi|355499814|gb|AES81017.1| Ubiquitin carrier protein
           [Medicago truncatula]
          Length = 267

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
 Frame = +3

Query: 3   EYARHARIFTATHAVNPKRAIFKTGAMPESNTDVNVVNQKNSVTGASVHLQPSAAS---- 170
           EYARHAR+ T  HA  PK   FK+GA+ ES T +NV     SV  + +   PS A+    
Sbjct: 142 EYARHARLLTGIHA-KPKPK-FKSGAITESTTALNVDQTNTSVLNSDIKTMPSGAALPPL 199

Query: 171 --SISNARATTGQDQLIAAPNSMVKTEGGVASATVAPAPVMQTKEVHATSKVQADKKKVD 344
              ++     TGQDQ +    +        A+A V+ A   Q +++  T+K QADKKK+D
Sbjct: 200 SLPLTTGARGTGQDQAVVGVLTESSANVSSAAAVVSAAHAPQKRDI-GTAKAQADKKKLD 258

Query: 345 A 347
           A
Sbjct: 259 A 259


>ref|NP_001239955.1| uncharacterized protein LOC100811067 [Glycine max]
           gi|255644866|gb|ACU22933.1| unknown [Glycine max]
          Length = 258

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 51/117 (43%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   EYARHARIFTATHAVNPKRAIFKTGAMPESNTDVNVVNQKNSVTGASVHLQPSAASSISN 182
           EYARHAR++T  HA  PK   FK+GA+ ES T +NV     SV  A +   P A++++  
Sbjct: 142 EYARHARLYTGIHA-KPKPK-FKSGAISESTTALNVDQTNTSVISADIKTTP-ASAALPA 198

Query: 183 ARATTGQDQLIAAPNSMVKTEGGVASATV--APAPVMQTKEVHATSKVQADKKKVDA 347
           A AT G +Q  AA        G  A+ATV  A A   Q KE    +K Q DKKK+DA
Sbjct: 199 ATATRGNNQEQAA----AAVNGSNAAATVISAAASAPQKKE-GGQAKAQVDKKKIDA 250


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