BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027048
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF14584.1|AF191494_1 nucleotide excision repair protein XP-F...   154   9e-36
ref|NP_001031991.1| DNA repair endonuclease UVH1 [Arabidopsis th...   154   9e-36
ref|NP_198931.1| DNA repair endonuclease UVH1 [Arabidopsis thali...   154   9e-36
gb|ABQ52659.1| ultraviolet hypersensitive 1 [Arabidopsis thaliana]    154   9e-36
gb|AAF81910.1|AF277377_1 5' repair endonuclease [Arabidopsis tha...   152   3e-35

>gb|AAF14584.1|AF191494_1 nucleotide excision repair protein XP-F homolog [Arabidopsis
            thaliana]
          Length = 688

 Score =  154 bits (388), Expect = 9e-36
 Identities = 91/214 (42%), Positives = 120/214 (56%), Gaps = 60/214 (28%)
 Frame = -1

Query: 463  LHSLPKHNKKKKQDSKGIGVLDGMIRKTSGNTTDVSSISKQENDVLLAAASE-------- 308
            L S+    KKK++  KG G+LDG++  T+   ++ SS+ +QE++ L+AAAS         
Sbjct: 458  LRSMQTPQKKKQKTPKGFGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTT 517

Query: 307  -----------------------------LRKQVKKDNEK------------DNSETIDA 251
                                         LR+ ++  N+K            +N E  + 
Sbjct: 518  DMASGNNNPEPHVDKASCTKGKAKKDPTSLRRSLRSCNKKTTNSKPEILPGPENEEKANE 577

Query: 250  EGTSS-----------SNLLPPVHFYAMENDTHILDILKPSVIIVYHPDMAFVREIEIYK 104
              TS+           +  LPPVHFYA+E+D  ILDILKPSVIIVYHPDM FVRE+E+YK
Sbjct: 578  ASTSAPQEANAVRPSGAKKLPPVHFYALESDQPILDILKPSVIIVYHPDMGFVRELEVYK 637

Query: 103  SENPSNKLKVYFLFYDDSTEVQKFEASIRRENGA 2
            +ENP  KLKVYF+FYD+STEVQKFEASIRREN A
Sbjct: 638  AENPLRKLKVYFIFYDESTEVQKFEASIRRENEA 671


>ref|NP_001031991.1| DNA repair endonuclease UVH1 [Arabidopsis thaliana]
            gi|332007265|gb|AED94648.1| DNA repair endonuclease UVH1
            [Arabidopsis thaliana]
          Length = 689

 Score =  154 bits (388), Expect = 9e-36
 Identities = 91/214 (42%), Positives = 120/214 (56%), Gaps = 60/214 (28%)
 Frame = -1

Query: 463  LHSLPKHNKKKKQDSKGIGVLDGMIRKTSGNTTDVSSISKQENDVLLAAASE-------- 308
            L S+    KKK++  KG G+LDG++  T+   ++ SS+ +QE++ L+AAAS         
Sbjct: 458  LRSMQTPQKKKQKTPKGFGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTT 517

Query: 307  -----------------------------LRKQVKKDNEK------------DNSETIDA 251
                                         LR+ ++  N+K            +N E  + 
Sbjct: 518  DMASGNNNPEPHVDKASCTKGKAKKDPTSLRRSLRSCNKKTTNSKPEILPGPENEEKANE 577

Query: 250  EGTSS-----------SNLLPPVHFYAMENDTHILDILKPSVIIVYHPDMAFVREIEIYK 104
              TS+           +  LPPVHFYA+E+D  ILDILKPSVIIVYHPDM FVRE+E+YK
Sbjct: 578  ASTSAPQEANAVRPSGAKKLPPVHFYALESDQPILDILKPSVIIVYHPDMGFVRELEVYK 637

Query: 103  SENPSNKLKVYFLFYDDSTEVQKFEASIRRENGA 2
            +ENP  KLKVYF+FYD+STEVQKFEASIRREN A
Sbjct: 638  AENPLRKLKVYFIFYDESTEVQKFEASIRRENEA 671


>ref|NP_198931.1| DNA repair endonuclease UVH1 [Arabidopsis thaliana]
            gi|55976770|sp|Q9LKI5.2|XPF_ARATH RecName: Full=DNA
            repair endonuclease UVH1; AltName: Full=DNA excision
            repair protein XP-F homolog; AltName: Full=Ultraviolet
            hypersensitive 1; Short=AtRAD1
            gi|6013183|gb|AAF01274.1|AF160500_1 repair endonuclease
            [Arabidopsis thaliana]
            gi|11995299|gb|AAG42948.1|AF089003_1 single stranded DNA
            endonuclease RAD1 [Arabidopsis thaliana]
            gi|9759161|dbj|BAB09717.1| repair endonuclease
            [Arabidopsis thaliana] gi|22655254|gb|AAM98217.1| repair
            endonuclease [Arabidopsis thaliana]
            gi|87128657|gb|ABD23028.1| ultraviolet hypersensitive 1
            [Arabidopsis thaliana] gi|332007264|gb|AED94647.1| DNA
            repair endonuclease UVH1 [Arabidopsis thaliana]
          Length = 956

 Score =  154 bits (388), Expect = 9e-36
 Identities = 91/214 (42%), Positives = 120/214 (56%), Gaps = 60/214 (28%)
 Frame = -1

Query: 463  LHSLPKHNKKKKQDSKGIGVLDGMIRKTSGNTTDVSSISKQENDVLLAAASE-------- 308
            L S+    KKK++  KG G+LDG++  T+   ++ SS+ +QE++ L+AAAS         
Sbjct: 458  LRSMQTPQKKKQKTPKGFGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTT 517

Query: 307  -----------------------------LRKQVKKDNEK------------DNSETIDA 251
                                         LR+ ++  N+K            +N E  + 
Sbjct: 518  DMASGNNNPEPHVDKASCTKGKAKKDPTSLRRSLRSCNKKTTNSKPEILPGPENEEKANE 577

Query: 250  EGTSS-----------SNLLPPVHFYAMENDTHILDILKPSVIIVYHPDMAFVREIEIYK 104
              TS+           +  LPPVHFYA+E+D  ILDILKPSVIIVYHPDM FVRE+E+YK
Sbjct: 578  ASTSAPQEANAVRPSGAKKLPPVHFYALESDQPILDILKPSVIIVYHPDMGFVRELEVYK 637

Query: 103  SENPSNKLKVYFLFYDDSTEVQKFEASIRRENGA 2
            +ENP  KLKVYF+FYD+STEVQKFEASIRREN A
Sbjct: 638  AENPLRKLKVYFIFYDESTEVQKFEASIRRENEA 671


>gb|ABQ52659.1| ultraviolet hypersensitive 1 [Arabidopsis thaliana]
          Length = 935

 Score =  154 bits (388), Expect = 9e-36
 Identities = 91/214 (42%), Positives = 120/214 (56%), Gaps = 60/214 (28%)
 Frame = -1

Query: 463  LHSLPKHNKKKKQDSKGIGVLDGMIRKTSGNTTDVSSISKQENDVLLAAASE-------- 308
            L S+    KKK++  KG G+LDG++  T+   ++ SS+ +QE++ L+AAAS         
Sbjct: 474  LRSMQTPQKKKQKTPKGFGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTT 533

Query: 307  -----------------------------LRKQVKKDNEK------------DNSETIDA 251
                                         LR+ ++  N+K            +N E  + 
Sbjct: 534  DMASGNNNPEPHVDKASCTKGKAKKDPTSLRRSLRSCNKKTTNSKPEILPGPENEEKANE 593

Query: 250  EGTSS-----------SNLLPPVHFYAMENDTHILDILKPSVIIVYHPDMAFVREIEIYK 104
              TS+           +  LPPVHFYA+E+D  ILDILKPSVIIVYHPDM FVRE+E+YK
Sbjct: 594  ASTSAPQEANAVRPSGAKKLPPVHFYALESDQPILDILKPSVIIVYHPDMGFVRELEVYK 653

Query: 103  SENPSNKLKVYFLFYDDSTEVQKFEASIRRENGA 2
            +ENP  KLKVYF+FYD+STEVQKFEASIRREN A
Sbjct: 654  AENPLRKLKVYFIFYDESTEVQKFEASIRRENEA 687


>gb|AAF81910.1|AF277377_1 5' repair endonuclease [Arabidopsis thaliana]
          Length = 956

 Score =  152 bits (384), Expect = 3e-35
 Identities = 90/214 (42%), Positives = 120/214 (56%), Gaps = 60/214 (28%)
 Frame = -1

Query: 463  LHSLPKHNKKKKQDSKGIGVLDGMIRKTSGNTTDVSSISKQENDVLLAAASE-------- 308
            L S+    KKK++  KG G+LDG++  T+   ++ SS+ +QE++ L+AAAS         
Sbjct: 458  LRSMQTPQKKKQKTPKGFGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSIRKLGKTT 517

Query: 307  -----------------------------LRKQVKKDNEK------------DNSETIDA 251
                                         L++ ++  N+K            +N E  + 
Sbjct: 518  DMASGNNNPEPHVDKASCTKGKAKKDLTSLQRSLRSCNKKTANSKPEILPGPENEEKANE 577

Query: 250  EGTSS-----------SNLLPPVHFYAMENDTHILDILKPSVIIVYHPDMAFVREIEIYK 104
              TS+           +  LPPVHFYA+E+D  ILDILKPSVIIVYHPDM FVRE+E+YK
Sbjct: 578  ASTSAPQEANAVRPSGAKKLPPVHFYALESDQPILDILKPSVIIVYHPDMGFVRELEVYK 637

Query: 103  SENPSNKLKVYFLFYDDSTEVQKFEASIRRENGA 2
            +ENP  KLKVYF+FYD+STEVQKFEASIRREN A
Sbjct: 638  AENPLRKLKVYFIFYDESTEVQKFEASIRRENEA 671