BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027010
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       182   1e-64
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           170   3e-61
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   170   3e-61
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   164   3e-59
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   164   3e-59

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  182 bits (461), Expect(2) = 1e-64
 Identities = 105/279 (37%), Positives = 150/279 (53%), Gaps = 13/279 (4%)
 Frame = +1

Query: 106  EEIYM**KSRVFWAKYGDXXXXXXXXXXXXXXXSNKILCLNDEQGNTVGTHEEISDRDVS 285
            EE +   KSR+ W   GD               SN I  L D  G  V + E I D   S
Sbjct: 348  EESFFRQKSRISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCAS 407

Query: 286  YFTNLLGVKHNSKPIHDDLDISFLNENMISMLQW----PVLPCEVLQT---------LKT 426
            YF +LLG         D++D   + +N +++L      P   CE+  T         L +
Sbjct: 408  YFGSLLG---------DEVDPYLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFS 458

Query: 427  MPKSKSPGPDGLTVEFYLACWSIVGLEVTNAVMSFFDDLCLPRCINSAAITLVPKQNNPS 606
            +P++KS GPDG T EF++  WSIVG EVT+A+  FF   CL +  N+  I L+PK  NP+
Sbjct: 459  LPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPT 518

Query: 607  TLVHFRPISCCNTLYKCISKILASRLRTVVGSIVSPNQSAFIPGRTIGDNISLCQSLCQN 786
                FRPISC NTLYK I+++L  RL+ ++  ++S  QSAF+PGR++ +N+ L   L   
Sbjct: 519  CTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHG 578

Query: 787  YHSPRGHPRCTMKLDLHKAFDSISWDFLFDALSRMRFPD 903
            Y+     PR  +K+DL KAFDS+ W+F+  AL  +  P+
Sbjct: 579  YNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPE 617



 Score = 92.8 bits (229), Expect(2) = 1e-64
 Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = +3

Query: 891  AIP*QFINWLRMCITTPMYSIKINGSLEGFFRGQSGLRQGDPVSPYLFVIAMEILSCLLR 1070
            AIP +FINW+  CI+TP +++ ING   GFF+   GLRQGDP+SPYLFV+AME  S LL 
Sbjct: 614  AIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLH 673

Query: 1071 RAAQSPCFSHH*KTEKIGITNLIL-QMTSWFFVKGTLTLFHVC 1196
               +S    +H K   + I++L+       FF  G+ +L  +C
Sbjct: 674  SRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGIC 716


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  170 bits (431), Expect(2) = 3e-61
 Identities = 95/271 (35%), Positives = 149/271 (54%), Gaps = 5/271 (1%)
 Frame = +1

Query: 106  EEIYM**KSRVFWAKYGDXXXXXXXXXXXXXXXSNKILCLNDEQGNTVGTHEEISDRDVS 285
            EE +   +SRV W   GD                N I  L D  G  + + + I D  V+
Sbjct: 208  EESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVT 267

Query: 286  YFTNLLGVKHNSKPIHDDLDISFL-----NENMISMLQWPVLPCEVLQTLKTMPKSKSPG 450
            Y+  LLG   +   +  + D++ L     +++  S L+      E+    K++P++K+ G
Sbjct: 268  YYERLLGSIESPFSMEQE-DMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSG 326

Query: 451  PDGLTVEFYLACWSIVGLEVTNAVMSFFDDLCLPRCINSAAITLVPKQNNPSTLVHFRPI 630
            PDG +VEF+   WSI+G EV  A+  FFD   L +  N+  + L+PK +N  T+  FRPI
Sbjct: 327  PDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPI 386

Query: 631  SCCNTLYKCISKILASRLRTVVGSIVSPNQSAFIPGRTIGDNISLCQSLCQNYHSPRGHP 810
            SC NTLYK ISK+L SRL+ ++ +++  +QSAF+PGR++ +N+ L   +   Y+     P
Sbjct: 387  SCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISP 446

Query: 811  RCTMKLDLHKAFDSISWDFLFDALSRMRFPD 903
            R  +K+DL KAFDS+ W+F+  AL  +  P+
Sbjct: 447  RGMLKVDLKKAFDSVKWEFVTAALRALAIPE 477



 Score = 92.8 bits (229), Expect(2) = 3e-61
 Identities = 45/100 (45%), Positives = 61/100 (61%)
 Frame = +3

Query: 891  AIP*QFINWLRMCITTPMYSIKINGSLEGFFRGQSGLRQGDPVSPYLFVIAMEILSCLLR 1070
            AIP ++INW+  CITTP ++I +NG+  GFFR   GLRQGDP+SPYLFV+AME+ S LL 
Sbjct: 474  AIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLY 533

Query: 1071 RAAQSPCFSHH*KTEKIGITNLILQMTSWFFVKGTLTLFH 1190
                S    +H K   + I++L+       F  G  +  H
Sbjct: 534  SRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMH 573


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  170 bits (431), Expect(2) = 3e-61
 Identities = 95/271 (35%), Positives = 149/271 (54%), Gaps = 5/271 (1%)
 Frame = +1

Query: 106  EEIYM**KSRVFWAKYGDXXXXXXXXXXXXXXXSNKILCLNDEQGNTVGTHEEISDRDVS 285
            EE +   +SRV W   GD                N I  L D  G  + + + I D  V+
Sbjct: 208  EESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVT 267

Query: 286  YFTNLLGVKHNSKPIHDDLDISFL-----NENMISMLQWPVLPCEVLQTLKTMPKSKSPG 450
            Y+  LLG   +   +  + D++ L     +++  S L+      E+    K++P++K+ G
Sbjct: 268  YYERLLGSIESPFSMEQE-DMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSG 326

Query: 451  PDGLTVEFYLACWSIVGLEVTNAVMSFFDDLCLPRCINSAAITLVPKQNNPSTLVHFRPI 630
            PDG +VEF+   WSI+G EV  A+  FFD   L +  N+  + L+PK +N  T+  FRPI
Sbjct: 327  PDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPI 386

Query: 631  SCCNTLYKCISKILASRLRTVVGSIVSPNQSAFIPGRTIGDNISLCQSLCQNYHSPRGHP 810
            SC NTLYK ISK+L SRL+ ++ +++  +QSAF+PGR++ +N+ L   +   Y+     P
Sbjct: 387  SCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISP 446

Query: 811  RCTMKLDLHKAFDSISWDFLFDALSRMRFPD 903
            R  +K+DL KAFDS+ W+F+  AL  +  P+
Sbjct: 447  RGMLKVDLKKAFDSVKWEFVTAALRALAIPE 477



 Score = 92.8 bits (229), Expect(2) = 3e-61
 Identities = 45/100 (45%), Positives = 61/100 (61%)
 Frame = +3

Query: 891  AIP*QFINWLRMCITTPMYSIKINGSLEGFFRGQSGLRQGDPVSPYLFVIAMEILSCLLR 1070
            AIP ++INW+  CITTP ++I +NG+  GFFR   GLRQGDP+SPYLFV+AME+ S LL 
Sbjct: 474  AIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLY 533

Query: 1071 RAAQSPCFSHH*KTEKIGITNLILQMTSWFFVKGTLTLFH 1190
                S    +H K   + I++L+       F  G  +  H
Sbjct: 534  SRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMH 573


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  164 bits (414), Expect(2) = 3e-59
 Identities = 95/279 (34%), Positives = 149/279 (53%), Gaps = 8/279 (2%)
 Frame = +1

Query: 91   ISLKNEEIYM**KSRVFWAKYGDXXXXXXXXXXXXXXXSNKILCLNDEQGNTV----GTH 258
            I  K EE +   KS + W   GD                N I  L D+ G  +    G  
Sbjct: 340  ILAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIK 399

Query: 259  EEISDRDVSYFTNLL-GVKHNSKPIHDDLDI--SF-LNENMISMLQWPVLPCEVLQTLKT 426
            E I +   ++F +LL GV+  +     D+++  SF  + + I+ L+      ++ +   +
Sbjct: 400  EGIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQINDLERSFSDLDIQEAFFS 459

Query: 427  MPKSKSPGPDGLTVEFYLACWSIVGLEVTNAVMSFFDDLCLPRCINSAAITLVPKQNNPS 606
            +P++K+ GPDG + EF+   W +VG EVT AV  FF    L +  N+  + L+PK  N S
Sbjct: 460  LPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSS 519

Query: 607  TLVHFRPISCCNTLYKCISKILASRLRTVVGSIVSPNQSAFIPGRTIGDNISLCQSLCQN 786
             +  FRPISC NTLYK I+K+L SRL+ ++  ++SP+QSAF+PGR + +N+ L   +   
Sbjct: 520  KMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHG 579

Query: 787  YHSPRGHPRCTMKLDLHKAFDSISWDFLFDALSRMRFPD 903
            Y++     R  +K+DL KAFDS+ WDF+  A   +  P+
Sbjct: 580  YNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPE 618



 Score = 92.8 bits (229), Expect(2) = 3e-59
 Identities = 42/100 (42%), Positives = 62/100 (62%)
 Frame = +3

Query: 891  AIP*QFINWLRMCITTPMYSIKINGSLEGFFRGQSGLRQGDPVSPYLFVIAMEILSCLLR 1070
            A+P +F+ W+  CI+TP +S+ +NGS  GFF+   GLRQGDP+SPYLFV+AME+ S LL+
Sbjct: 615  AVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLK 674

Query: 1071 RAAQSPCFSHH*KTEKIGITNLILQMTSWFFVKGTLTLFH 1190
                +    +H KT  + I++L+       F  G  +  H
Sbjct: 675  ARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLH 714


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  164 bits (414), Expect(2) = 3e-59
 Identities = 95/279 (34%), Positives = 149/279 (53%), Gaps = 8/279 (2%)
 Frame = +1

Query: 91   ISLKNEEIYM**KSRVFWAKYGDXXXXXXXXXXXXXXXSNKILCLNDEQGNTV----GTH 258
            I  K EE +   KS + W   GD                N I  L D+ G  +    G  
Sbjct: 340  ILAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIK 399

Query: 259  EEISDRDVSYFTNLL-GVKHNSKPIHDDLDI--SF-LNENMISMLQWPVLPCEVLQTLKT 426
            E I +   ++F +LL GV+  +     D+++  SF  + + I+ L+      ++ +   +
Sbjct: 400  EGIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQINDLERSFSDLDIQEAFFS 459

Query: 427  MPKSKSPGPDGLTVEFYLACWSIVGLEVTNAVMSFFDDLCLPRCINSAAITLVPKQNNPS 606
            +P++K+ GPDG + EF+   W +VG EVT AV  FF    L +  N+  + L+PK  N S
Sbjct: 460  LPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSS 519

Query: 607  TLVHFRPISCCNTLYKCISKILASRLRTVVGSIVSPNQSAFIPGRTIGDNISLCQSLCQN 786
             +  FRPISC NTLYK I+K+L SRL+ ++  ++SP+QSAF+PGR + +N+ L   +   
Sbjct: 520  KMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHG 579

Query: 787  YHSPRGHPRCTMKLDLHKAFDSISWDFLFDALSRMRFPD 903
            Y++     R  +K+DL KAFDS+ WDF+  A   +  P+
Sbjct: 580  YNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPE 618



 Score = 92.4 bits (228), Expect(2) = 3e-59
 Identities = 42/100 (42%), Positives = 62/100 (62%)
 Frame = +3

Query: 891  AIP*QFINWLRMCITTPMYSIKINGSLEGFFRGQSGLRQGDPVSPYLFVIAMEILSCLLR 1070
            A+P +F+ W+  CI+TP +S+ +NGS  GFF+   GLRQGDP+SPYLFV+AME+ S LL+
Sbjct: 615  AVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLK 674

Query: 1071 RAAQSPCFSHH*KTEKIGITNLILQMTSWFFVKGTLTLFH 1190
                +    +H KT  + I++L+       F  G  +  H
Sbjct: 675  ARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLH 714