BLASTX nr result

ID: Bupleurum21_contig00027005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027005
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   149   4e-34
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   149   5e-34
ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|2...   145   5e-33
emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]   145   7e-33
ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like...   144   2e-32

>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score =  149 bits (377), Expect = 4e-34
 Identities = 82/170 (48%), Positives = 108/170 (63%), Gaps = 18/170 (10%)
 Frame = +1

Query: 1   IKSIAVCKYRKSDGLVDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHSNCP 180
           IKSI VCKY++ DGLV+G DC+VCLSEFQE+ESLRLLPKCSHAFHL CIDTWL+SHSNCP
Sbjct: 124 IKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCP 183

Query: 181 LCRANVITF---TPLPSQGNSSYTNYNVSSLQMTMQNDLVLVIDDRNVVHRNE------- 330
           LCRAN+I+    +P+    +++Y   N +  + +  ND   V  D      NE       
Sbjct: 184 LCRANIISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGKNSVR 243

Query: 331 AFDVLGNSSNQENV--------QEITRSVSRESLSCQNNPTISDILDITE 456
           AF  LGN   ++ +        Q+I RS+S +  S QN+  I+D+L + E
Sbjct: 244 AFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCS-QNHIIIADVLRLNE 292


>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  149 bits (376), Expect = 5e-34
 Identities = 85/181 (46%), Positives = 111/181 (61%), Gaps = 26/181 (14%)
 Frame = +1

Query: 1   IKSIAVCKYRKSDGLVDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHSNCP 180
           IKSI +CKY+K DGLV+G DC+VCLSEF+E ESLRLLPKCSHAFH+ CIDTWL+SHSNCP
Sbjct: 122 IKSITLCKYKKGDGLVEGTDCSVCLSEFEEEESLRLLPKCSHAFHVQCIDTWLKSHSNCP 181

Query: 181 LCRANVITFTPLPSQ-----GNSSYTNYNVSSLQMTMQN-----DLVLVIDDRNVVHRNE 330
           LCRAN++  T  P+Q       S   N      Q+  +N     DL  V ++  ++ RNE
Sbjct: 182 LCRANIVPTTVSPTQLPPPVMESPLNNEPSQQSQLEHENVAVGEDLERVAEEEEIM-RNE 240

Query: 331 --------AFDVLGNSSNQENV--------QEITRSVSRESLSCQNNPTISDILDITECE 462
                    F  LGNS  ++ +        Q+I RS+S +  SCQ   +++DIL + E E
Sbjct: 241 VIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLD-YSCQTRLSVADILLMNEDE 299

Query: 463 D 465
           D
Sbjct: 300 D 300


>ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|222857605|gb|EEE95152.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  145 bits (367), Expect = 5e-33
 Identities = 89/188 (47%), Positives = 112/188 (59%), Gaps = 30/188 (15%)
 Frame = +1

Query: 1   IKSIAVCKYRKSDGLVDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHSNCP 180
           +KSI VCKY+K DG V+G +C+VCLSEFQENESLRLLPKCSHAFHLPCIDTWL+SH++CP
Sbjct: 119 VKSITVCKYKKGDGFVEGTECSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHASCP 178

Query: 181 LCRANVITFTPLPSQG-------NSSYTNYNVSSLQMTM-QNDLVLVIDD-RNVVHRNEA 333
           LCRAN+     LPS+          +    NVS+LQ     ND VLVI D      R E 
Sbjct: 179 LCRANIAPANILPSEAPAVPEPVQENLPRTNVSTLQYQHGTNDAVLVIQDLEGSTFRQEG 238

Query: 334 FD--VLGNSS-----NQ--------------ENVQEITRSVSRESLSCQNNPTISDILDI 450
               V+G+ +     NQ              + +Q + RSVS  S   QN+ +I+DIL  
Sbjct: 239 VVSLVIGDDTPKTPVNQDLESSQTGTELQISDPIQPLRRSVS--SSFSQNHTSIADILRT 296

Query: 451 TECEDNSS 474
           +E +D  S
Sbjct: 297 SEDDDEGS 304


>emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
          Length = 1377

 Score =  145 bits (366), Expect = 7e-33
 Identities = 81/181 (44%), Positives = 109/181 (60%), Gaps = 26/181 (14%)
 Frame = +1

Query: 1    IKSIAVCKYRKSDGLVDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHSNCP 180
            IKSI +CKY+K DGLV+G DC+VCLSEF+E+ESLRLLPKCSHAFH+ CIDTWL+SHSNCP
Sbjct: 1124 IKSITLCKYKKGDGLVEGTDCSVCLSEFEEDESLRLLPKCSHAFHVQCIDTWLKSHSNCP 1183

Query: 181  LCRANVITFTPLPSQ----------GNSSYTNYNVSSLQMTMQNDLVLVIDDRNVVHRNE 330
            LCRAN++  T  P+Q           N       +    + +  DL  V ++  ++ RNE
Sbjct: 1184 LCRANIVPTTVSPTQLPPPVMEXPLNNEPSQQSQLEHENVAVGEDLERVAEEEEIM-RNE 1242

Query: 331  --------AFDVLGNSSNQENV--------QEITRSVSRESLSCQNNPTISDILDITECE 462
                     F  LGNS  ++ +        Q+I RS+S +  S Q   +++DIL + E E
Sbjct: 1243 VIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLD-YSXQTRLSVADILLMNEDE 1301

Query: 463  D 465
            D
Sbjct: 1302 D 1302


>ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
           gi|449487632|ref|XP_004157723.1| PREDICTED: RING-H2
           finger protein ATL51-like [Cucumis sativus]
          Length = 382

 Score =  144 bits (362), Expect = 2e-32
 Identities = 87/210 (41%), Positives = 114/210 (54%), Gaps = 43/210 (20%)
 Frame = +1

Query: 1   IKSIAVCKYRKSDGLVDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHSNCP 180
           IKSI VCKY++ DGLV+G DC+VCLSEFQENESLRLLPKCSHAFHLPCIDTWL+SHS CP
Sbjct: 124 IKSITVCKYKRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHSTCP 183

Query: 181 LCRANV--ITFTPLPSQGNSSYTNYNVSSLQMTMQ---NDLVLVI-----DDRNVVHRNE 330
           LCR+N+        P+Q   +  ++  S+ Q   Q   ND ++V+     DD  VV +  
Sbjct: 184 LCRSNISPTNLFSTPTQEIQTTQHFVSSAFQYQHQHRTNDTIVVVVVQDLDDLTVVRQET 243

Query: 331 AFDVLGN----SSNQEN-----------------------------VQEITRSVSRESLS 411
               L N    S NQ                               V+   RSVS  SLS
Sbjct: 244 VDSRLENDDASSKNQREGCAAESQISGARERMNQVRQEYDVVVDGVVEPFRRSVSLNSLS 303

Query: 412 CQNNPTISDILDITECEDNSSLENMESQVG 501
            Q   +++DIL +++  +  + E+   Q+G
Sbjct: 304 WQGQVSVADILRVSQDSEEEAEEDELQQMG 333


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