BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026978
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I sub...   130   2e-28
emb|CBI19898.3| unnamed protein product [Vitis vinifera]              130   2e-28
dbj|BAJ33670.1| unnamed protein product [Thellungiella halophila]     124   2e-26
ref|XP_002875292.1| transcription factor S-II domain-containing ...   124   2e-26
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ...   123   4e-26

>ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449450516|ref|XP_004143008.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449450518|ref|XP_004143009.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus] gi|449500372|ref|XP_004161079.1| PREDICTED:
           DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Cucumis sativus] gi|449500375|ref|XP_004161080.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform 2 [Cucumis sativus]
           gi|449500379|ref|XP_004161081.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
           sativus]
          Length = 116

 Score =  130 bits (327), Expect = 2e-28
 Identities = 63/119 (52%), Positives = 77/119 (64%)
 Frame = -3

Query: 614 MEYCHNRDFLFCDMCGTMLSLNSTKFAHCPLCKYQRSVKEIAGKEIGYTINAEVIQRELG 435
           M Y    DFLFC++CGTMLS  STK+  CP CK +RS KEI G+EI YT+ AE I+++LG
Sbjct: 1   MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLG 60

Query: 434 ISTFDGEGEKDKKAIDYSARCKNCPKVGLQYEARQMRSADEGQTIFYTCTDCGHTRTEN 258
           IS  D   E+  +      RC+ C      +E+RQMRSADEGQT FYTCT C H   EN
Sbjct: 61  ISLID---EEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN 116


>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score =  130 bits (327), Expect = 2e-28
 Identities = 65/126 (51%), Positives = 85/126 (67%), Gaps = 6/126 (4%)
 Frame = -3

Query: 614 MEYCHNRDFLFCDMCGTMLSLNSTKFAHCPLCKYQRSVKEIAGKEIGYTINAEVIQRELG 435
           M Y   RDF+FC++CGTML ++STK+A CPLCK +R VK+I+G+EI YT++AE I+REL 
Sbjct: 1   MAYSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELN 60

Query: 434 ISTF---DG--EGEKDKKAIDYSARCKNCPK-VGLQYEARQMRSADEGQTIFYTCTDCGH 273
           I  F   DG    E + +      RC  C +   L Y  RQ+RSADEGQTIFY CT CGH
Sbjct: 61  IEPFVKLDGIITEESEAQNAKTKGRCDRCEEDTWLYYYTRQLRSADEGQTIFYECTKCGH 120

Query: 272 TRTENS 255
             ++N+
Sbjct: 121 KWSQNT 126


>dbj|BAJ33670.1| unnamed protein product [Thellungiella halophila]
          Length = 119

 Score =  124 bits (311), Expect = 2e-26
 Identities = 60/118 (50%), Positives = 75/118 (63%)
 Frame = -3

Query: 614 MEYCHNRDFLFCDMCGTMLSLNSTKFAHCPLCKYQRSVKEIAGKEIGYTINAEVIQRELG 435
           ME      FLFC++CGTML L S   A CPLC+  R+ KEI GK+I YT++AE I+RELG
Sbjct: 1   MEKSRESGFLFCNLCGTMLILKSATSAECPLCQTTRNAKEIIGKDIAYTVSAEDIRRELG 60

Query: 434 ISTFDGEGEKDKKAIDYSARCKNCPKVGLQYEARQMRSADEGQTIFYTCTDCGHTRTE 261
           IS F  + ++D +       C+ C    L Y  RQ RSADEGQT +YTC +CGH  TE
Sbjct: 61  ISLFGEKTQEDAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCGHRFTE 118


>ref|XP_002875292.1| transcription factor S-II domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321130|gb|EFH51551.1|
           transcription factor S-II domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 119

 Score =  124 bits (311), Expect = 2e-26
 Identities = 60/118 (50%), Positives = 74/118 (62%)
 Frame = -3

Query: 614 MEYCHNRDFLFCDMCGTMLSLNSTKFAHCPLCKYQRSVKEIAGKEIGYTINAEVIQRELG 435
           ME      FLFC+ CGTML L STK+A CPLCK  R+ KEI  K+I YT+ AE I+RELG
Sbjct: 1   MEKSRESGFLFCNWCGTMLVLKSTKYAECPLCKTTRNAKEIINKDIAYTVTAEDIRRELG 60

Query: 434 ISTFDGEGEKDKKAIDYSARCKNCPKVGLQYEARQMRSADEGQTIFYTCTDCGHTRTE 261
           IS F  + +++ +       C+ C    L Y  RQ RSADEGQT +YTC +C H  TE
Sbjct: 61  ISLFGEKTQEEAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
           gi|357470681|ref|XP_003605625.1| DNA-directed RNA
           polymerase I subunit RPA12 [Medicago truncatula]
           gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
           gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
          Length = 115

 Score =  123 bits (308), Expect = 4e-26
 Identities = 61/117 (52%), Positives = 77/117 (65%)
 Frame = -3

Query: 608 YCHNRDFLFCDMCGTMLSLNSTKFAHCPLCKYQRSVKEIAGKEIGYTINAEVIQRELGIS 429
           Y   RDFLFC +CGTML++ ST +A CPLCK + ++K+I GKEI YTI+AE I+RELGI 
Sbjct: 2   YSRGRDFLFCHLCGTMLTVPSTDYALCPLCKTKCNIKDIKGKEISYTISAEDIRRELGID 61

Query: 428 TFDGEGEKDKKAIDYSARCKNCPKVGLQYEARQMRSADEGQTIFYTCTDCGHTRTEN 258
             +   E+  +    +  C+ C      +  RQMRSADEGQT FYTCT CGH   EN
Sbjct: 62  LIE---EQKVQLSKVNKTCEKCGHGEAAFYTRQMRSADEGQTTFYTCTRCGHQFQEN 115