BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026977
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   422   e-115
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...   382   e-104
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,...   379   e-102
ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi...   349   8e-94
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...   335   1e-89

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  422 bits (1084), Expect = e-115
 Identities = 213/381 (55%), Positives = 276/381 (72%), Gaps = 6/381 (1%)
 Frame = +3

Query: 3    LSIPWFSCMSRGSTSLYRKQLSRERKQKWVFKGTQTSRFHRLVDMCAKKMGSDNTLQVFG 182
            L +PWF  +S  + SL RK++SRERKQKWVFK TQ  R  RLV  CA+K+G++ T+QVFG
Sbjct: 103  LDVPWFPTLSHNNISLRRKEVSRERKQKWVFKNTQGGRLDRLVKTCAQKLGTEATIQVFG 162

Query: 183  KLGRETGVKEYNALMRLCIDKARKTEDDEIILRQIYKAYKVLEIMKEQGFPVKEVTYGPL 362
            KLGRETGVKEY AL+ +CI+KAR ++D+E  L QIYKA+++ E MKEQGF ++E TYGP 
Sbjct: 163  KLGRETGVKEYKALLGICIEKARTSDDEEASLEQIYKAFQLFEEMKEQGFHIEEETYGPF 222

Query: 363  LIYLIDKGLVEEFHFFCHLIRDENSDALSRLSYYEMLLWIRVDDEDKIKELLNNIATKDG 542
             +YLID G++EEFHFF  +I DENS +LSRL YYEMLLW+RV++E+KI+EL N IA  DG
Sbjct: 223  FMYLIDMGMIEEFHFFHGVITDENSRSLSRLGYYEMLLWVRVNNEEKIQELCNGIAADDG 282

Query: 543  EDMSSL------QENYLLALSECDRKDEVLLLLNSIDIAKVSSVNHMTNIFRILGRHTLA 704
             D  +L       ENY+LAL E  RK+E+L +L  IDI KVSSV+++ +IF+ LGR +LA
Sbjct: 283  ADKPNLTDTVYIAENYVLALCESGRKEELLKVLEIIDITKVSSVDYVASIFKSLGRLSLA 342

Query: 705  STAKKFLQALKIHDVGAEQXXXXXXXXXXXXPNLAVGDIVLNINNLHGELEVAPSSAPYE 884
            S  +KF+ A K  D GAE+            PNLAV D++L   +LH +L V PSS  Y 
Sbjct: 343  SFMEKFVSAFKACDYGAEEISDFIFYYASNMPNLAVEDVILKFKDLHAQLVVTPSSTSYN 402

Query: 885  KLIKQCCVSHKVHIALDIVDHILKAGLPLSIEIYLSILNACDDSCEYNLVRRIYGLMCHH 1064
            KL+  CC S KVH ALDIVD + +AGL LSIE++ SIL A ++S E+NLV RIY ++CH 
Sbjct: 403  KLVTYCCDSFKVHAALDIVDQMCEAGLTLSIEMFHSILRASEESFEFNLVHRIYSVICHQ 462

Query: 1065 NVKPNNEIFRCMISLSVKMKD 1127
            +++PN E FR MI+L VKMKD
Sbjct: 463  SLEPNCETFRIMINLHVKMKD 483


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
            predicted protein [Populus trichocarpa]
          Length = 784

 Score =  382 bits (982), Expect = e-104
 Identities = 195/375 (52%), Positives = 262/375 (69%)
 Frame = +3

Query: 3    LSIPWFSCMSRGSTSLYRKQLSRERKQKWVFKGTQTSRFHRLVDMCAKKMGSDNTLQVFG 182
            L IPW S +   +  + RK +SRERKQKWVF  +Q +  +R+VD CA K+G+DN ++VFG
Sbjct: 44   LEIPWLSRLKNNNIGMLRKDVSRERKQKWVFTYSQVNHINRIVDTCADKLGTDNAMEVFG 103

Query: 183  KLGRETGVKEYNALMRLCIDKARKTEDDEIILRQIYKAYKVLEIMKEQGFPVKEVTYGPL 362
            KLGRETG+KE+NALM+  I++ R+T+D+ + ++ I    ++ + MKEQGF ++E TYGP 
Sbjct: 104  KLGRETGLKEFNALMKKYIEQCRETDDESVAMKHISAVLQLFKSMKEQGFSIEEETYGPF 163

Query: 363  LIYLIDKGLVEEFHFFCHLIRDENSDALSRLSYYEMLLWIRVDDEDKIKELLNNIATKDG 542
            LI LIDKG+VEEFHFF  +I+D N    +RL YY+MLL+I V+DE+KI+EL N I   DG
Sbjct: 164  LILLIDKGMVEEFHFFSDIIKDTNPSKNARLGYYDMLLYIGVNDEEKIQELCNYICIDDG 223

Query: 543  EDMSSLQENYLLALSECDRKDEVLLLLNSIDIAKVSSVNHMTNIFRILGRHTLASTAKKF 722
            ++  SL+ENYLLAL E D+K+ +L LL ++DI K SS++H+ +IF+ LGR +L S AKKF
Sbjct: 224  DNNISLRENYLLALCESDQKNYLLQLLETMDITKFSSLDHLASIFKSLGRLSLESFAKKF 283

Query: 723  LQALKIHDVGAEQXXXXXXXXXXXXPNLAVGDIVLNINNLHGELEVAPSSAPYEKLIKQC 902
            L  LK  D GAE             PNL V D+V     LH  ++++PSS  YEKL+   
Sbjct: 284  LLVLKSCDYGAEDISTLIFSYATSIPNLVVEDVVSKFKTLHMIMKMSPSSTSYEKLVVYN 343

Query: 903  CVSHKVHIALDIVDHILKAGLPLSIEIYLSILNACDDSCEYNLVRRIYGLMCHHNVKPNN 1082
            C   KVH+ALDIVD + K GL +SI    SILNA ++S ++NLVRRIY L+ H ++ PNN
Sbjct: 344  CNLLKVHLALDIVDQMCKEGLTISINTIHSILNASEESFDFNLVRRIYSLIYHLDLTPNN 403

Query: 1083 EIFRCMISLSVKMKD 1127
            E FR MISLSVKMKD
Sbjct: 404  ETFRSMISLSVKMKD 418


>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 867

 Score =  379 bits (972), Expect = e-102
 Identities = 196/373 (52%), Positives = 255/373 (68%)
 Frame = +3

Query: 9    IPWFSCMSRGSTSLYRKQLSRERKQKWVFKGTQTSRFHRLVDMCAKKMGSDNTLQVFGKL 188
            IPWF  +S G+ +  RK++SR RKQKW+F   Q +RF +L+ M  +K+GS+  L++F KL
Sbjct: 140  IPWFQNLSHGNVNQQRKEVSRTRKQKWIFSSGQKTRFDQLIRMIDQKLGSEAILELFSKL 199

Query: 189  GRETGVKEYNALMRLCIDKARKTEDDEIILRQIYKAYKVLEIMKEQGFPVKEVTYGPLLI 368
            GRETGVKEYNAL+++ I+KAR ++D ++ L+ I  A++ L++MKE+GF + E TY P L+
Sbjct: 200  GRETGVKEYNALIKILIEKARASDDKDVALKHIIVAFEFLKLMKEEGFRIDEETYSPFLM 259

Query: 369  YLIDKGLVEEFHFFCHLIRDENSDALSRLSYYEMLLWIRVDDEDKIKELLNNIATKDGED 548
            YLID G+V EF  FC  I + +S +L+RL YYEMLL IRV++E+KI+EL + IA  +  +
Sbjct: 260  YLIDMGMVTEFGSFCEAIEENDSSSLARLGYYEMLLCIRVNNEEKIRELCSYIANNNLNE 319

Query: 549  MSSLQENYLLALSECDRKDEVLLLLNSIDIAKVSSVNHMTNIFRILGRHTLASTAKKFLQ 728
               L ENYLLAL E DRK+E+L LL  +DI KVSS+ HM +IF  LGR  L S AKKFL 
Sbjct: 320  TFDLLENYLLALCERDRKNELLQLLEIVDITKVSSLEHMVSIFNSLGRLLLESLAKKFLS 379

Query: 729  ALKIHDVGAEQXXXXXXXXXXXXPNLAVGDIVLNINNLHGELEVAPSSAPYEKLIKQCCV 908
              K  D   E             PNLAV D +L   NLH  LE+ PSS  YEKLI   C 
Sbjct: 380  TFKECDYDTENISTLIFSYATSVPNLAVEDAILKFKNLHVMLEMPPSSKSYEKLIIYSCD 439

Query: 909  SHKVHIALDIVDHILKAGLPLSIEIYLSILNACDDSCEYNLVRRIYGLMCHHNVKPNNEI 1088
              KVH ALDIVD + KA L LSI++  SIL AC++S E+NLV++IY L+CHHN+ PNNE 
Sbjct: 440  LLKVHAALDIVDQMCKADLTLSIDVLNSILRACEESFEFNLVQQIYSLICHHNLTPNNET 499

Query: 1089 FRCMISLSVKMKD 1127
            FR MI L VKMKD
Sbjct: 500  FRSMIKLRVKMKD 512


>ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial [Glycine max]
          Length = 755

 Score =  349 bits (895), Expect = 8e-94
 Identities = 175/374 (46%), Positives = 252/374 (67%)
 Frame = +3

Query: 6    SIPWFSCMSRGSTSLYRKQLSRERKQKWVFKGTQTSRFHRLVDMCAKKMGSDNTLQVFGK 185
            ++ W S +S+ +  L  K+ SR++KQK VF  TQ SRF +LV++CA+ +G + T+++FGK
Sbjct: 96   NLSWLSSVSQSNVLLQWKEQSRKKKQKCVFDFTQESRFQKLVEVCARILGPEATIELFGK 155

Query: 186  LGRETGVKEYNALMRLCIDKARKTEDDEIILRQIYKAYKVLEIMKEQGFPVKEVTYGPLL 365
            +GRE  VK YN L+ +CIDKAR T+D +I ++++ K + + + M+EQG  ++E TY PLL
Sbjct: 156  VGREPDVKGYNTLVEMCIDKARGTDDKDIAIQELGKVFNLFKSMREQGLELQEQTYRPLL 215

Query: 366  IYLIDKGLVEEFHFFCHLIRDENSDALSRLSYYEMLLWIRVDDEDKIKELLNNIATKDGE 545
            +YLID  +VEEF FFC +I DEN  +++RL YYEML+W++ ++E+KI+ + +NIA   GE
Sbjct: 216  LYLIDMCMVEEFQFFCVVIEDENPSSVARLGYYEMLMWLKDNNEEKIQGICDNIAENKGE 275

Query: 546  DMSSLQENYLLALSECDRKDEVLLLLNSIDIAKVSSVNHMTNIFRILGRHTLASTAKKFL 725
            D S +QENYLLAL E +R +E+L LL  IDI  +SS   +  +F+ LGR  L   A+KFL
Sbjct: 276  DTSDIQENYLLALCESERMEEILKLLEIIDIKNLSSAESVAKVFQALGRLLLEPVAEKFL 335

Query: 726  QALKIHDVGAEQXXXXXXXXXXXXPNLAVGDIVLNINNLHGELEVAPSSAPYEKLIKQCC 905
               K  D  A+             P+L+V D++    +LH  LEV+PSS+ YEKLI   C
Sbjct: 336  LDFKTSDHEADNITDFIASYAVSIPDLSVKDVIKKFKDLHQRLEVSPSSSSYEKLILHSC 395

Query: 906  VSHKVHIALDIVDHILKAGLPLSIEIYLSILNACDDSCEYNLVRRIYGLMCHHNVKPNNE 1085
               KVH+ALDIVD + +AGL LS ++  SIL  CDD+ EYNLV RI+  +  +N++ N+E
Sbjct: 396  ALLKVHVALDIVDEMCEAGLTLSTKVLHSILQICDDTSEYNLVHRIFSTIHRYNLESNDE 455

Query: 1086 IFRCMISLSVKMKD 1127
             FR MI L +KMKD
Sbjct: 456  TFRSMIDLFLKMKD 469


>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Glycine max]
          Length = 1117

 Score =  335 bits (859), Expect = 1e-89
 Identities = 171/371 (46%), Positives = 244/371 (65%)
 Frame = +3

Query: 3    LSIPWFSCMSRGSTSLYRKQLSRERKQKWVFKGTQTSRFHRLVDMCAKKMGSDNTLQVFG 182
            + IPW   +S G  S  RK ++RERKQKW+FK T   RF RL+ MCA K+G   T+ VFG
Sbjct: 98   VDIPWILDLSHGKLSEKRKDVARERKQKWIFKYTSDDRFDRLIKMCADKLGVGKTVNVFG 157

Query: 183  KLGRETGVKEYNALMRLCIDKARKTEDDEIILRQIYKAYKVLEIMKEQGFPVKEVTYGPL 362
            +LGRETGVKEYN L+++C+ KAR T+D+ I +R++ KA+ + + M++ G+P++E TYGPL
Sbjct: 158  QLGRETGVKEYNTLIKMCVKKARATDDEFIGVREMSKAFHLYKSMRDLGYPLEEKTYGPL 217

Query: 363  LIYLIDKGLVEEFHFFCHLIRDENSDALSRLSYYEMLLWIRVDDEDKIKELLNNIATKDG 542
            L YL+D GLV+EF  F  +I+ EN  + SRL YYEMLLW+RV +E+ I+++   I  +  
Sbjct: 218  LRYLVDMGLVQEFQLFTDIIKTENPSSASRLGYYEMLLWLRVGNEEMIRDICEYITVEAR 277

Query: 543  EDMSSLQENYLLALSECDRKDEVLLLLNSIDIAKVSSVNHMTNIFRILGRHTLASTAKKF 722
            E+ S+L+E+YL+AL E DRK ++L ++ +ID+ K+SS   + +IF+ LGR  L S A   
Sbjct: 278  EETSALRESYLMALCESDRKMQILDVVKNIDVTKLSSAKSIADIFQSLGRLHLESIADDL 337

Query: 723  LQALKIHDVGAEQXXXXXXXXXXXXPNLAVGDIVLNINNLHGELEVAPSSAPYEKLIKQC 902
            L  L+  D  A+             PNLAV DI+    N+H  LEV PS++ YEKLI  C
Sbjct: 338  LLDLRACDHDADNISNFIVSYAVSIPNLAVEDIIPKFKNMHELLEVLPSTSSYEKLILHC 397

Query: 903  CVSHKVHIALDIVDHILKAGLPLSIEIYLSILNACDDSCEYNLVRRIYGLMCHHNVKPNN 1082
            C   KV IALDIV+ + +AG  LS E+   IL  C++S EY LV RIY ++C ++++ N 
Sbjct: 398  CGLDKVGIALDIVEKMCEAGFTLSTEVLQCILQICEESYEYILVHRIYSIICRYHLELNG 457

Query: 1083 EIFRCMISLSV 1115
            EI R +   +V
Sbjct: 458  EICRRLCPTTV 468