BLASTX nr result
ID: Bupleurum21_contig00026969
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00026969
(256 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat... 81 1e-13
emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera] 81 1e-13
ref|XP_002319048.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13
ref|XP_002328356.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13
ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat... 79 3e-13
>ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 80.9 bits (198), Expect = 1e-13
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +2
Query: 5 FSLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIID 184
FS+L I+K G PN+ T+NTL++GL + K E HLF K+I + QPN VTY T+I+
Sbjct: 114 FSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG-EGFQPNVVTYGTLIN 172
Query: 185 GLCKTGHISKAVKLFRFMEKKGCK 256
GLCK G S A++L R ME+ C+
Sbjct: 173 GLCKVGSTSAAIRLLRSMEQGNCQ 196
Score = 62.0 bits (149), Expect = 5e-08
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +2
Query: 23 IIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDGLCKTG 202
++ +GF P+V++Y+TL+ G + +A +LF ++ R KE+ PN VTY+T++ GLC G
Sbjct: 330 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR-KELIPNTVTYSTLMHGLCHVG 388
Query: 203 HISKAVKLFRFMEKKG 250
+ A+ LF M +G
Sbjct: 389 RLQDAIALFHEMVTRG 404
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/81 (32%), Positives = 49/81 (60%)
Frame = +2
Query: 8 SLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDG 187
+LL ++ +PNV+ ++T++ L + K +EA+ + +I+ + ++PN VTY ++DG
Sbjct: 255 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK-RGVEPNVVTYNALMDG 313
Query: 188 LCKTGHISKAVKLFRFMEKKG 250
C + +AVK+F M KG
Sbjct: 314 HCLRSEMDEAVKVFDTMVCKG 334
>emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 80.9 bits (198), Expect = 1e-13
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +2
Query: 5 FSLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIID 184
FS+L I+K G PN+ T+NTL++GL + K E HLF K+I + QPN VTY T+I+
Sbjct: 123 FSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG-EGFQPNVVTYGTLIN 181
Query: 185 GLCKTGHISKAVKLFRFMEKKGCK 256
GLCK G S A++L R ME+ C+
Sbjct: 182 GLCKVGSTSAAIRLLRSMEQGNCQ 205
Score = 62.0 bits (149), Expect = 5e-08
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +2
Query: 23 IIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDGLCKTG 202
++ +GF P+V++Y+TL+ G + +A +LF ++ R KE+ PN VTY+T++ GLC G
Sbjct: 339 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR-KELIPNTVTYSTLMHGLCHVG 397
Query: 203 HISKAVKLFRFMEKKG 250
+ A+ LF M +G
Sbjct: 398 RLQDAIALFHEMVTRG 413
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/81 (32%), Positives = 49/81 (60%)
Frame = +2
Query: 8 SLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDG 187
+LL ++ +PNV+ ++T++ L + K +EA+ + +I+ + ++PN VTY ++DG
Sbjct: 264 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK-RGVEPNVVTYNALMDG 322
Query: 188 LCKTGHISKAVKLFRFMEKKG 250
C + +AVK+F M KG
Sbjct: 323 HCLRSEMDEAVKVFDTMVCKG 343
>ref|XP_002319048.1| predicted protein [Populus trichocarpa] gi|222857424|gb|EEE94971.1|
predicted protein [Populus trichocarpa]
Length = 497
Score = 80.1 bits (196), Expect = 2e-13
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = +2
Query: 5 FSLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIID 184
FS+LG + K G PN +T++TL+ GL S+ K ++A LF ++++ +P+ +TY+TII+
Sbjct: 32 FSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMG-YEPDVITYSTIIN 90
Query: 185 GLCKTGHISKAVKLFRFMEKKGCK 256
GLCK G + A++L + ME+KGCK
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEKGCK 114
Score = 62.4 bits (150), Expect = 4e-08
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +2
Query: 8 SLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDG 187
SL +++R +P+ +T+N L+ GL + +EA +F +I K ++PN TY ++DG
Sbjct: 173 SLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIE-KGVEPNVNTYNALMDG 231
Query: 188 LCKTGHISKAVKLFRFMEKKGC 253
C + +A KLF M +KGC
Sbjct: 232 YCSQSQMDEAQKLFNIMVRKGC 253
Score = 55.8 bits (133), Expect = 4e-06
Identities = 26/78 (33%), Positives = 48/78 (61%)
Frame = +2
Query: 11 LLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDGL 190
LL + + P+ +TY+TLMKG + +A L ++ +R + P+ +TY+ ++DGL
Sbjct: 279 LLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKL-LEEMRSYGLLPDLMTYSIVLDGL 337
Query: 191 CKTGHISKAVKLFRFMEK 244
CK GH+ +A +L + M++
Sbjct: 338 CKQGHLDEAFELLKAMQE 355
Score = 55.8 bits (133), Expect = 4e-06
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = +2
Query: 5 FSLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIID 184
F LL + + PN+ Y L++G+ + K A LF L K IQP+ VTYT +I
Sbjct: 347 FELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLF-VKGIQPDVVTYTVMIS 405
Query: 185 GLCKTGHISKAVKLFRFMEKKGC 253
GL K G ++A +LFR M GC
Sbjct: 406 GLLKGGLSNEACELFRDMAVHGC 428
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 11 LLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDGL 190
L ++K G+ P+VITY+T++ GL A L +K + K +PN V Y+TIID L
Sbjct: 69 LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQL-LKKMEEKGCKPNVVVYSTIIDSL 127
Query: 191 CKTGHISKAVKLFRFMEKKG 250
CK I++A++ M +G
Sbjct: 128 CKDKLITEAMEFLSEMVNRG 147
>ref|XP_002328356.1| predicted protein [Populus trichocarpa] gi|222838071|gb|EEE76436.1|
predicted protein [Populus trichocarpa]
Length = 613
Score = 80.1 bits (196), Expect = 2e-13
Identities = 38/83 (45%), Positives = 59/83 (71%)
Frame = +2
Query: 8 SLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDG 187
S+LG + K G P+ IT+N L+ GL ++ K EA LF ++++ + +PN ++YTT+I+G
Sbjct: 149 SVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVK-RGHEPNVISYTTVING 207
Query: 188 LCKTGHISKAVKLFRFMEKKGCK 256
LCKTG+ S AV +F+ ME+ GCK
Sbjct: 208 LCKTGNTSMAVDVFKKMEQNGCK 230
Score = 67.4 bits (163), Expect = 1e-09
Identities = 31/79 (39%), Positives = 52/79 (65%)
Frame = +2
Query: 14 LGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDGLC 193
L +++RG PNV TYN+++ G + + EA LF +++ +++ PN VT+T ++DGLC
Sbjct: 256 LSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG-RDVMPNTVTFTILVDGLC 314
Query: 194 KTGHISKAVKLFRFMEKKG 250
K G +S+A +F M +KG
Sbjct: 315 KEGMVSEARLVFETMTEKG 333
Score = 62.8 bits (151), Expect = 3e-08
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = +2
Query: 8 SLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDG 187
SLL + + P+ +TY+TLM+GL + EA +LF ++ + PN VTY ++DG
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGP-HPNLVTYVILLDG 452
Query: 188 LCKTGHISKAVKLFRFMEKK 247
CK GH+ +A+KL + M++K
Sbjct: 453 FCKHGHLDEALKLLKSMKEK 472
>ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 79.3 bits (194), Expect = 3e-13
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = +2
Query: 5 FSLLGGIIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIID 184
FS+L I+K G P+ ++ TL+KGL + + EA HLF K+I ++ QP+ V Y T+I+
Sbjct: 129 FSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMI-WEGFQPDVVIYATLIN 187
Query: 185 GLCKTGHISKAVKLFRFMEKKGCK 256
GLCKTGH S A++L R MEK C+
Sbjct: 188 GLCKTGHTSAAIRLLRSMEKGNCQ 211
Score = 61.2 bits (147), Expect = 8e-08
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 23 IIKRGFLPNVITYNTLMKGLISQDKCVEANHLFIKLIRFKEIQPNAVTYTTIIDGLCKTG 202
++ +G PNV +YNTL+ G ++ +A +LF ++ R K I PN VTY T+I GLC G
Sbjct: 345 MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI-PNTVTYNTLIHGLCHVG 403
Query: 203 HISKAVKLFRFM 238
+ A+ LFR M
Sbjct: 404 RLQDAIALFREM 415