BLASTX nr result

ID: Bupleurum21_contig00026968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026968
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308266.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_002514067.1| monooxygenase, putative [Ricinus communis] g...   116   5e-24
ref|XP_004170730.1| PREDICTED: RING-H2 finger protein ATL1-like ...   105   1e-20
gb|ADM35971.1| RING zinc finger protein [Amaranthus hypochondria...   104   2e-20
ref|XP_004144121.1| PREDICTED: RING-H2 finger protein ATL1-like ...   102   7e-20

>ref|XP_002308266.1| predicted protein [Populus trichocarpa] gi|222854242|gb|EEE91789.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  125 bits (314), Expect = 1e-26
 Identities = 70/137 (51%), Positives = 84/137 (61%), Gaps = 8/137 (5%)
 Frame = +3

Query: 261 NLIIVKWCADQRPQLHDASLSIQVASVSTRRSVDCSSNVKEVGVSFKYKKGE-DSIQVGY 437
           NLII+KWCA QR        ++     +++     +SN+     SFKYKKG+ D  Q   
Sbjct: 48  NLIIIKWCA-QRGGRSGQGPNVFTEVTASQSFEHSNSNLPS---SFKYKKGKIDGDQDQG 103

Query: 438 GNQDCPVCLSVFEEEEEVRQLPMCKHSFHAPCIDMWLYSHLDCPLCRTPVEPP------- 596
              +C VCLS FEE EEVRQLP CKHSFHAPCIDMWLYSH DCPLCR+ V+PP       
Sbjct: 104 SGYECAVCLSAFEEGEEVRQLPRCKHSFHAPCIDMWLYSHSDCPLCRSSVDPPLAVCNRR 163

Query: 597 DISQRPSTSENSREVLM 647
             +    TSENSRE L+
Sbjct: 164 TAAAAADTSENSREGLL 180


>ref|XP_002514067.1| monooxygenase, putative [Ricinus communis]
           gi|223546523|gb|EEF48021.1| monooxygenase, putative
           [Ricinus communis]
          Length = 468

 Score =  116 bits (291), Expect = 5e-24
 Identities = 66/137 (48%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
 Frame = +3

Query: 261 NLIIVKWCADQRPQLHDASLSIQVASVSTRRSVDCSSNVKEVGVSFKYKKGEDSIQVGYG 440
           NLII++WC  Q  Q H +        V    +   SSN+     SFKYKK ++ I   +G
Sbjct: 328 NLIIIRWCTHQHRQDHSSGQGPN-RFVEVTTASQSSSNLL---TSFKYKK-DNLIAKDHG 382

Query: 441 NQ--DCPVCLSVFEEEEEVRQLPMCKHSFHAPCIDMWLYSHLDCPLCRTPVE--PPDISQ 608
           +   +C VCLSVFE+ EEV++LP C HSFHA CIDMWLYSH DCPLCR  V+  PP   +
Sbjct: 383 SSHYECAVCLSVFEDGEEVKKLPGCNHSFHASCIDMWLYSHYDCPLCRARVDPLPPSFYR 442

Query: 609 R---PSTSENSREVLMG 650
           R   P+ S+NS+E L+G
Sbjct: 443 RHSVPTASDNSQENLLG 459


>ref|XP_004170730.1| PREDICTED: RING-H2 finger protein ATL1-like [Cucumis sativus]
          Length = 162

 Score =  105 bits (262), Expect = 1e-20
 Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 4/133 (3%)
 Frame = +3

Query: 261 NLIIVKWCADQRPQLHDASLSIQVASVSTRRSVDCSSNVKEVGVSFKYKKGEDS-IQVGY 437
           N I++KWC+D R +   A         S    ++ S + +    SFK+KK   +  + G 
Sbjct: 39  NFIVIKWCSDNRHRRRMAG--------SYEEMMNSSRSFQSSLSSFKFKKVAGAGAEEGN 90

Query: 438 GNQDCPVCLSVFEEEEEVRQLPMCKHSFHAPCIDMWLYSHLDCPLCRTPVEPPDISQRPS 617
           GN+ C VCLS FE+ EEV++LP C H+FHA CIDMWLYSH DCPLCR PV    +S+  +
Sbjct: 91  GNE-CAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPV--AGLSRHEA 147

Query: 618 TS---ENSREVLM 647
           T+   ENS  VL+
Sbjct: 148 TAEQEENSGHVLL 160


>gb|ADM35971.1| RING zinc finger protein [Amaranthus hypochondriacus]
          Length = 173

 Score =  104 bits (260), Expect = 2e-20
 Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
 Frame = +3

Query: 267 IIVKWCADQRPQ-LHDASLSIQVASVSTRRSVDCSSNVKEVGVSFKYKKGEDSIQVGYGN 443
           + + WC+D  P  L  A           R+ ++ +S      + +KYKKGE    +G  N
Sbjct: 50  LALNWCSDYPPVWLRTAQTGPTEQQCQARKVIEFNS------IRYKYKKGE----MGTNN 99

Query: 444 QDCPVCLSVFEEEEEVRQLPMCKHSFHAPCIDMWLYSHLDCPLCRTPV 587
           ++C VCLS FEEEE++R+L  CKHSFHA CIDMWL+SH DCPLCR PV
Sbjct: 100 EECVVCLSGFEEEEDIRKLVKCKHSFHALCIDMWLFSHFDCPLCRAPV 147


>ref|XP_004144121.1| PREDICTED: RING-H2 finger protein ATL1-like [Cucumis sativus]
          Length = 166

 Score =  102 bits (255), Expect = 7e-20
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
 Frame = +3

Query: 261 NLIIVKWCADQRPQLHDASLSIQVASVSTRRSVDCSSNVKEVGVSFKYKKGEDS-IQVGY 437
           N I++KWC+D R +   A         S    ++ S + +    SFK+KK   +  + G 
Sbjct: 39  NFIVIKWCSDNRHRRRMAG--------SYEEMMNSSRSFQSSLSSFKFKKVAGAGAEEGN 90

Query: 438 GNQDCPVCLSVFEEEEEVRQLPMCKHSFHAPCIDMWLYSHLDCPLCRTPV 587
           GN+ C VCLS FE+ EEV++LP C H+FHA CIDMWLYSH DCPLCR PV
Sbjct: 91  GNE-CAVCLSAFEDGEEVKKLPRCTHTFHASCIDMWLYSHSDCPLCRAPV 139


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