BLASTX nr result

ID: Bupleurum21_contig00026959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026959
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533331.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
emb|CAN78958.1| hypothetical protein VITISV_008152 [Vitis vinifera]    63   3e-08
emb|CBI38683.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002320216.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002302653.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002533331.1| conserved hypothetical protein [Ricinus communis]
           gi|223526836|gb|EEF29052.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
 Frame = +2

Query: 146 NDKNETMTKALSVPYVNSNVQAVNNSILFNATCTHHDPGVHIYLSR--GGPGSKVKKHMN 319
           N K + M       ++NSNVQ VNNSI++N++CTHHDPGVH+ LSR   G G  VK   N
Sbjct: 441 NHKGKGMNSLPMTAFMNSNVQGVNNSIVYNSSCTHHDPGVHLALSRKSAGGGFHVKDRSN 500


>emb|CAN78958.1| hypothetical protein VITISV_008152 [Vitis vinifera]
          Length = 277

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
 Frame = +2

Query: 149 DKNETMTKALSVP---YVNSNVQAVNNSILFNATCTHHDPGVHIYLSRGG 289
           DK E      S P   +VNSNVQA+NNSILFN + THHDPGVH++ S GG
Sbjct: 213 DKTENKMGTPSPPMSAFVNSNVQAINNSILFNTSLTHHDPGVHVFFSGGG 262


>emb|CBI38683.3| unnamed protein product [Vitis vinifera]
          Length = 666

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/34 (73%), Positives = 32/34 (94%)
 Frame = +2

Query: 188 YVNSNVQAVNNSILFNATCTHHDPGVHIYLSRGG 289
           ++NSNVQAVNNSIL NA+CT+H+PGVH++ SRGG
Sbjct: 165 FMNSNVQAVNNSILVNASCTNHEPGVHVFFSRGG 198


>ref|XP_002320216.1| predicted protein [Populus trichocarpa] gi|222860989|gb|EEE98531.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/51 (52%), Positives = 37/51 (72%)
 Frame = +2

Query: 146 NDKNETMTKALSVPYVNSNVQAVNNSILFNATCTHHDPGVHIYLSRGGPGS 298
           N K  +M  +    ++NSNVQ VNNSI++N++C+HHDPGVH+ LSR   GS
Sbjct: 383 NHKGRSMGPSPMSAFMNSNVQGVNNSIVYNSSCSHHDPGVHVALSRKPSGS 433


>ref|XP_002302653.1| predicted protein [Populus trichocarpa] gi|222844379|gb|EEE81926.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = +2

Query: 146 NDKNETMTKALSVPYVNSNVQAVNNSILFNATCTHHDPGVHIYLSR---GGPGSKVKKHM 316
           N   + M  +    ++NSNVQ VNNSI++N++C+HHDPGVH+ LSR   G     VK H 
Sbjct: 390 NPNGKAMGPSPLSSFMNSNVQGVNNSIVYNSSCSHHDPGVHVALSRKPAGAAAFHVKDHG 449

Query: 317 N 319
           N
Sbjct: 450 N 450


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