BLASTX nr result

ID: Bupleurum21_contig00026954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026954
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|2...    89   7e-16
ref|XP_002529250.1| conserved hypothetical protein [Ricinus comm...    85   1e-14
ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|222849390|gb|EEE86937.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 49/135 (36%), Positives = 66/135 (48%)
 Frame = -3

Query: 520 MDWVYPKRRGPEWKQSWTTQTLSNISSXXXXXXXXXXXXXXXXXXSQYTTLKSQLNNSKI 341
           M+W YPKRRGPEWKQ WT QT+ ++SS                  S YT  K+QL++S I
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTMGSVSSPPLPLLAIFGIVISLLWLSHYTGYKAQLHHSAI 60

Query: 340 SFQXXXXXXXXXXXXLMRSNLIPSGRRFNFWGGIQQPWHDSSGQRSGASPWGVAXXXXXX 161
           + Q             M S        +  +  ++   HDS  + SG+ PWG+A      
Sbjct: 61  NLQIFLVLLPILLILFMAS----YSTNWLLYYRLRSSQHDSDPRSSGSFPWGIAIFVVVL 116

Query: 160 XXXLSYQSSFHSKWF 116
              LSY+S+FHSKWF
Sbjct: 117 LMLLSYRSTFHSKWF 131


>ref|XP_002529250.1| conserved hypothetical protein [Ricinus communis]
           gi|223531286|gb|EEF33128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 55/141 (39%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
 Frame = -3

Query: 520 MDWVYPKRRGPEWKQSWTTQTLSNISSXXXXXXXXXXXXXXXXXXSQYTTLKSQLNNSKI 341
           M+W YP+RRGPEWKQ WT QTL +IS                   SQYT  K+QL++S I
Sbjct: 1   MEWFYPRRRGPEWKQGWTGQTLGSISIPPPPLLVIFGIVILLLWLSQYTDYKAQLHHSAI 60

Query: 340 SFQXXXXXXXXXXXXLMRS---NLIPSGRRFNFWGGIQQPWHDSSGQRS---GASPWGVA 179
           +FQ            L+ S   N +P  R       ++QP       RS    + PWG+A
Sbjct: 61  NFQLFLFLLPVLLILLIASYSTNWMPYFR-------LRQPRSGRESVRSAEGSSQPWGIA 113

Query: 178 XXXXXXXXXLSYQSSFHSKWF 116
                    LSYQSSFHSKWF
Sbjct: 114 AFVAVLLVLLSYQSSFHSKWF 134


>ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|222849131|gb|EEE86678.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 45/135 (33%), Positives = 65/135 (48%)
 Frame = -3

Query: 520 MDWVYPKRRGPEWKQSWTTQTLSNISSXXXXXXXXXXXXXXXXXXSQYTTLKSQLNNSKI 341
           M+W YPKRRGPEWKQ WT QT++++S+                  S YT  ++QL +S +
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTVASMSTPPFPLLAIFGIVISLLWLSHYTGYEAQLRHSAV 60

Query: 340 SFQXXXXXXXXXXXXLMRSNLIPSGRRFNFWGGIQQPWHDSSGQRSGASPWGVAXXXXXX 161
           + Q             M S        +  +  ++    DS+ + + + PWG+A      
Sbjct: 61  NLQIFLFLLPILLILFMAS----YSTNWLLYYRLRDSPPDSAPRSTSSFPWGIAVFVVLL 116

Query: 160 XXXLSYQSSFHSKWF 116
              LSYQSSFHSKWF
Sbjct: 117 LMLLSYQSSFHSKWF 131


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