BLASTX nr result

ID: Bupleurum21_contig00026951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026951
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris]                          191   4e-47
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   164   7e-39
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   163   2e-38
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   163   2e-38
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   161   5e-38

>emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris]
          Length = 374

 Score =  191 bits (486), Expect = 4e-47
 Identities = 89/123 (72%), Positives = 107/123 (86%)
 Frame = -1

Query: 369 FMGNNDQMIRDFKIVMTREFEMTDLGLMNYFLGLEIKQSESGIFVSQEKYANDILKRFRM 190
           FMGNN+ MI +FK  M REFEMTDLGLM +FLGLE++Q E+GIFVSQEKYA +ILK+++M
Sbjct: 65  FMGNNNDMIEEFKGTMRREFEMTDLGLMKFFLGLEVRQKETGIFVSQEKYAKEILKKYKM 124

Query: 189 EECSSVATPMEPGTKLSKFEGGDRVDANMYRSLVGSLRYLTCTRPDIAYSVGIVSRFMEE 10
           E C+ V+ PMEPG KLSKF+GG+RVDA+ YRSLVGSLRYLTCTRPD++ SVG +SRFMEE
Sbjct: 125 ENCNPVSIPMEPGAKLSKFDGGERVDASRYRSLVGSLRYLTCTRPDLSLSVGTISRFMEE 184

Query: 9   PRY 1
           P Y
Sbjct: 185 PVY 187


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  164 bits (415), Expect = 7e-39
 Identities = 74/121 (61%), Positives = 100/121 (82%)
 Frame = -1

Query: 369  FMGNNDQMIRDFKIVMTREFEMTDLGLMNYFLGLEIKQSESGIFVSQEKYANDILKRFRM 190
            F GNN  +  DFK  M+REF+MTD+GLM+Y+LG+E+KQ+++GIFVSQE+Y  ++LK+F M
Sbjct: 728  FTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGMEVKQTQNGIFVSQERYTKEVLKKFNM 787

Query: 189  EECSSVATPMEPGTKLSKFEGGDRVDANMYRSLVGSLRYLTCTRPDIAYSVGIVSRFMEE 10
             +C+ V TPME G KLSKF+ G++VD+ +++SLVGSLRYLT TRPDI Y+VG+V RFME 
Sbjct: 788  LDCNPVNTPMEGGLKLSKFDEGEKVDSTIFKSLVGSLRYLTNTRPDILYAVGVVCRFMEA 847

Query: 9    P 7
            P
Sbjct: 848  P 848


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/121 (61%), Positives = 98/121 (80%)
 Frame = -1

Query: 369  FMGNNDQMIRDFKIVMTREFEMTDLGLMNYFLGLEIKQSESGIFVSQEKYANDILKRFRM 190
            F GNN  M  +FK  MT+EFEMTD+GLM+Y+LG+E+KQ ++GIF++QE YA ++LK+F+M
Sbjct: 1037 FTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKM 1096

Query: 189  EECSSVATPMEPGTKLSKFEGGDRVDANMYRSLVGSLRYLTCTRPDIAYSVGIVSRFMEE 10
            ++ + V TPME G KLSK E G+ VD   ++SLVGSLRYLTCTRPDI Y+VG+VSR+ME 
Sbjct: 1097 DDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEH 1156

Query: 9    P 7
            P
Sbjct: 1157 P 1157


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/121 (61%), Positives = 98/121 (80%)
 Frame = -1

Query: 369  FMGNNDQMIRDFKIVMTREFEMTDLGLMNYFLGLEIKQSESGIFVSQEKYANDILKRFRM 190
            F GNN  M  +FK  MT+EFEMTD+GLM+Y+LG+E+KQ ++GIF++QE YA ++LK+F+M
Sbjct: 1005 FTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKM 1064

Query: 189  EECSSVATPMEPGTKLSKFEGGDRVDANMYRSLVGSLRYLTCTRPDIAYSVGIVSRFMEE 10
            ++ + V TPME G KLSK E G+ VD   ++SLVGSLRYLTCTRPDI Y+VG+VSR+ME 
Sbjct: 1065 DDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEH 1124

Query: 9    P 7
            P
Sbjct: 1125 P 1125


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  161 bits (408), Expect = 5e-38
 Identities = 73/121 (60%), Positives = 98/121 (80%)
 Frame = -1

Query: 369  FMGNNDQMIRDFKIVMTREFEMTDLGLMNYFLGLEIKQSESGIFVSQEKYANDILKRFRM 190
            F GNN  +  +FK  MT+EFEMTD+GLM+Y+LG+E+KQ ++GIF++QE YA ++LK+F+M
Sbjct: 1037 FTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKM 1096

Query: 189  EECSSVATPMEPGTKLSKFEGGDRVDANMYRSLVGSLRYLTCTRPDIAYSVGIVSRFMEE 10
            ++ + V TPME G KLSK E G+ VD   ++SLVGSLRYLTCTRPDI Y+VG+VSR+ME 
Sbjct: 1097 DDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEH 1156

Query: 9    P 7
            P
Sbjct: 1157 P 1157


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