BLASTX nr result

ID: Bupleurum21_contig00026937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026937
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533404.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|XP_002328327.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003602561.1| Protein IDA-like protein [Medicago truncatul...    70   3e-10
ref|XP_003630198.1| Protein IDA-like protein [Medicago truncatul...    69   3e-10
gb|AFK45340.1| unknown [Medicago truncatula]                           67   2e-09

>ref|XP_002533404.1| conserved hypothetical protein [Ricinus communis]
           gi|223526749|gb|EEF28977.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 87

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 7/73 (9%)
 Frame = +2

Query: 287 LLFLLHVWMIMVTSVE------GSRTNINVFNPKPK-PNSGHFLNNMPRRMPIPFSGPSR 445
           L+FLL  W++++  +       GSRT  NVF+ KPK  + GHFLN +PR  PIP SGPSR
Sbjct: 16  LVFLLF-WILLLLFISFFGYCHGSRTTANVFDVKPKNQHRGHFLNFLPRHFPIPTSGPSR 74

Query: 446 KHNDIGLQSWNSP 484
           +HNDIGLQSW SP
Sbjct: 75  RHNDIGLQSWRSP 87


>ref|XP_002328327.1| predicted protein [Populus trichocarpa] gi|222838042|gb|EEE76407.1|
           predicted protein [Populus trichocarpa]
          Length = 78

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = +2

Query: 281 SLLLFLLHVWMIMVTSVEGSRTNINVFNPKPKPN-SGHFLNNMPRRMPIPFSGPSRKHND 457
           +LLL L  ++ I          + NVFN KPK    GHFLN +PR +PIP SGPSR+HN 
Sbjct: 10  TLLLCLFFLFFIFFVGYSHGSRSTNVFNFKPKTQYKGHFLNFLPRHLPIPTSGPSRRHNG 69

Query: 458 IGLQSWNSP 484
           IGLQ+W SP
Sbjct: 70  IGLQNWRSP 78


>ref|XP_003602561.1| Protein IDA-like protein [Medicago truncatula]
           gi|355491609|gb|AES72812.1| Protein IDA-like protein
           [Medicago truncatula]
          Length = 76

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +2

Query: 278 SSLLLFLLHVWMIMVTSVEGSRTNINVFNPKPK-PNSGHFLNNMPRRMPIPFSGPSRKHN 454
           +SLLL LL  ++ +    +GSR   NVF  KPK  + GHF   +PRR+PIP+S PSRKHN
Sbjct: 10  TSLLLLLL--FLCIFGHCDGSRAT-NVFKVKPKYEHKGHFFGFLPRRIPIPYSSPSRKHN 66

Query: 455 DIGLQSWNSP 484
           DIGLQS  SP
Sbjct: 67  DIGLQSLRSP 76


>ref|XP_003630198.1| Protein IDA-like protein [Medicago truncatula]
           gi|357519903|ref|XP_003630240.1| Protein IDA-like
           protein [Medicago truncatula]
           gi|355524220|gb|AET04674.1| Protein IDA-like protein
           [Medicago truncatula] gi|355524262|gb|AET04716.1|
           Protein IDA-like protein [Medicago truncatula]
          Length = 76

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
 Frame = +2

Query: 290 LFLLHVWMIMVTSV----EGSRTNINVFNPKPKP-NSGHFLNNMPRRMPIPFSGPSRKHN 454
           L LL +W++++  +     GSRT  N F  KPK  + GHF   +P+RM IP+S PSRKHN
Sbjct: 8   LQLLVIWLLLILFILGQCHGSRTT-NDFKVKPKSEHQGHFFGFLPKRMHIPYSTPSRKHN 66

Query: 455 DIGLQSWNSP 484
           DIGL+SW SP
Sbjct: 67  DIGLRSWRSP 76


>gb|AFK45340.1| unknown [Medicago truncatula]
          Length = 76

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = +2

Query: 278 SSLLLFLLHVWMIMVTSVEGSRTNINVFNPKPK-PNSGHFLNNMPRRMPIPFSGPSRKHN 454
           +SLLL LL  ++ +    +GSR   NVF  KPK  + GHF   +P R+PIP+S PSRKHN
Sbjct: 10  TSLLLLLL--FLCIFGHCDGSRAT-NVFKVKPKYEHKGHFFGFLPGRIPIPYSSPSRKHN 66

Query: 455 DIGLQSWNSP 484
           DIGLQS  SP
Sbjct: 67  DIGLQSLRSP 76


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