BLASTX nr result

ID: Bupleurum21_contig00026927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026927
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531750.1| conserved hypothetical protein [Ricinus comm...    78   8e-13
ref|XP_002331665.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [...    74   9e-12
ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266...    72   4e-11
ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263...    72   5e-11

>ref|XP_002531750.1| conserved hypothetical protein [Ricinus communis]
           gi|223528620|gb|EEF30639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = +3

Query: 6   MTAVANAPLMMPVQKSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGYLDSGEDT 185
           +TA   A  ++P Q SPWHSPVPY                    CSYWKLSGYL++G + 
Sbjct: 3   VTAARTANPVVP-QHSPWHSPVPYLFGGLAAMLGLIAFALVILACSYWKLSGYLENGNEG 61

Query: 186 AERDLESGGEDAAGD---KKPAPVFEEKFLVIM 275
            ERDLE+GG +   +   ++   VFEEKFLVIM
Sbjct: 62  GERDLEAGGGEGGDNNEKQRQGVVFEEKFLVIM 94


>ref|XP_002331665.1| predicted protein [Populus trichocarpa] gi|222874084|gb|EEF11215.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/79 (53%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = +3

Query: 51  SPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGYLDSGEDTAERDLESG-GEDAAG 227
           SPWHSPVPY                    CSYWKLSGYL+SG +  ERDLE+G GE+ +G
Sbjct: 14  SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLESGNEGGERDLEAGEGENKSG 73

Query: 228 D---KKPAPVFEEKFLVIM 275
           D   KKP   FEEK LVIM
Sbjct: 74  DGSEKKPI-AFEEKILVIM 91


>ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis sativus]
          Length = 179

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/89 (48%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = +3

Query: 15  VANAPLMMPVQKSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGYLDSGEDTAER 194
           VA+   +   Q SPWHSPVPY                    CSYWKLSGYLD G D A R
Sbjct: 18  VAHHQQLQQQQHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLD-GSDAANR 76

Query: 195 --DLESGGEDAAGDKKPAPVFEEKFLVIM 275
             DLE+G +D    K+ +PVFEEK LVIM
Sbjct: 77  EPDLEAGADDT--QKQASPVFEEKILVIM 103


>ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266820 [Vitis vinifera]
          Length = 156

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/91 (43%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = +3

Query: 6   MTAVANAPLMMPVQKSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGYLDSGEDT 185
           + A A  P       SPWHSPVPY                    CSYWKLSGYL+  +D+
Sbjct: 8   LNATAATPAASVQPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGDDDS 67

Query: 186 AERDLESGGEDAAGDK-KPAPVFEEKFLVIM 275
             RD E+ G+ A GD  KP   FEEK LVIM
Sbjct: 68  VARDAEA-GDGAGGDAVKPPMAFEEKILVIM 97


>ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263835 [Vitis vinifera]
          Length = 171

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
 Frame = +3

Query: 12  AVANAPLMMP--VQKSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLS-GYLDSGED 182
           A  NA    P  VQ+SPWHSPVPY                    CSYW+ S G+LD+GE 
Sbjct: 5   ATFNATAASPATVQRSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRFSNGHLDNGES 64

Query: 183 TAERDLESGGEDAAGD-KKPAP-VFEEKFLVIM 275
             ERDLESG +   GD +K  P V+EEK +VIM
Sbjct: 65  GGERDLESGDDGKGGDARKVGPVVYEEKIVVIM 97


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