BLASTX nr result

ID: Bupleurum21_contig00026922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026922
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638304.1| hypothetical protein MTR_126s0013 [Medicago ...    72   5e-11
ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine ...    70   2e-10
ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]     68   7e-10
emb|CBI27227.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_002528150.1| DNA polymerase eta, putative [Ricinus commun...    67   1e-09

>ref|XP_003638304.1| hypothetical protein MTR_126s0013 [Medicago truncatula]
           gi|355504239|gb|AES85442.1| hypothetical protein
           MTR_126s0013 [Medicago truncatula]
          Length = 201

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
 Frame = -1

Query: 361 KEKGTSSILRFLQTQNHVSSNQETKEEISNAVLGNNHSSLSGEASCNT-----MTPEGAG 197
           K +G  SI +F        +N ++  E  N    N   S S  AS  T     +  EG G
Sbjct: 82  KPQGNCSITKFF-------NNSQSSFEQKNVT--NTQGSQSASASYLTSNQVEIPAEGVG 132

Query: 196 SKTIHNSIGQNRKKTDAYSYNIDEIDPNVVNELPLELQAEVRAWLRPQKRANNSVKRCFG 17
           +     S+    + + A+SYNIDEIDP++++ELP E+Q E R WLRP+KR  N VKR   
Sbjct: 133 TNNSGCSVDNMPQGSQAWSYNIDEIDPSIIDELPPEIQDEFRTWLRPRKRP-NVVKRGSS 191

Query: 16  IAHYF 2
           I  YF
Sbjct: 192 ITQYF 196


>ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine max]
          Length = 703

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
 Frame = -1

Query: 361 KEKGTSSILRFLQTQNHVSSNQETKEEISNAVLGNNHSSLSGEASCNTMTP-----EGAG 197
           K +G  SI+ F    ++  S+ E K    ++ LG++ +  S         P     E   
Sbjct: 574 KLQGNCSIVHFFNNYHNSQSSLEQKNVKISSSLGSHSADNSHSTCIQVEMPAEHPHEEFD 633

Query: 196 SKTIHNSIGQNRKKTDAYSYNIDEIDPNVVNELPLELQAEVRAWLRPQKRANNSVKRCFG 17
           +     S+G   +    +SYNI+EIDP+++NELP E+Q E + WLRP KR  N  KR   
Sbjct: 634 TNKSRCSVGNMPQGRQDWSYNINEIDPSIINELPPEIQQEFQIWLRPHKRP-NVAKRGSS 692

Query: 16  IAHYF 2
           I HYF
Sbjct: 693 ITHYF 697


>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -1

Query: 178 SIGQNRKKTDAYSYNIDEIDPNVVNELPLELQAEVRAWLRPQKRANNSVKRCFGIAHYF 2
           S+G   ++ + +SY IDEIDP+V++ELP E++AEV+AWLRPQK A    KR   IAHYF
Sbjct: 716 SLGGGAERRETWSYKIDEIDPSVMDELPPEIRAEVQAWLRPQKPAKTG-KRGSSIAHYF 773


>emb|CBI27227.3| unnamed protein product [Vitis vinifera]
          Length = 773

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -1

Query: 178 SIGQNRKKTDAYSYNIDEIDPNVVNELPLELQAEVRAWLRPQKRANNSVKRCFGIAHYF 2
           S+G   ++ + +SY IDEIDP+V++ELP E++AEV+AWLRPQK A    KR   IAHYF
Sbjct: 710 SLGGGAERRETWSYKIDEIDPSVMDELPPEIRAEVQAWLRPQKPAKTG-KRGSSIAHYF 767


>ref|XP_002528150.1| DNA polymerase eta, putative [Ricinus communis]
           gi|223532448|gb|EEF34241.1| DNA polymerase eta, putative
           [Ricinus communis]
          Length = 560

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 25/142 (17%)
 Frame = -1

Query: 352 GTSSILRFLQTQN--HVSSNQETKEEISNA------------------VLGNNHSSLSGE 233
           GTSSI+++   Q+  H  S Q     I +A                  ++ N   +L  E
Sbjct: 417 GTSSIMKYFNGQSSFHCPSKQTPDSFIHDAPPSSPSGSSFWVVSFMLVLILNEELNLGSE 476

Query: 232 ASC-----NTMTPEGAGSKTIHNSIGQNRKKTDAYSYNIDEIDPNVVNELPLELQAEVRA 68
            +       ++  E   +   HN + QN ++ ++++Y IDEIDP+V+NELP E+Q EVRA
Sbjct: 477 VNLVELGKESLLAEHRANYDRHN-LTQNAER-ESWNYKIDEIDPSVINELPPEIQDEVRA 534

Query: 67  WLRPQKRANNSVKRCFGIAHYF 2
           WL+P KRA   VK+   IAHYF
Sbjct: 535 WLQPHKRA-RIVKKGATIAHYF 555