BLASTX nr result
ID: Bupleurum21_contig00026921
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00026921 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas... 130 1e-28 gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-ty... 112 2e-23 gb|AFK44938.1| unknown [Lotus japonicus] 112 3e-23 emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 111 5e-23 emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 111 7e-23 >dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia x hybrida] Length = 389 Score = 130 bits (327), Expect = 1e-28 Identities = 61/94 (64%), Positives = 76/94 (80%) Frame = +1 Query: 1 AELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSG 180 AE+AW+ RLL DL++ P+ V CD+Q+AI+IAKNPVFHERTKHI+LDCHFVREKL G Sbjct: 285 AEIAWIVRLLHDLSVDFSLPVSVHCDNQSAIHIAKNPVFHERTKHIELDCHFVREKLLDG 344 Query: 181 LISLSYVPTKLQLADVFTKPLPGIQHHSILCKLG 282 LISLS+VP+ Q+AD+FTK L G H S++ KLG Sbjct: 345 LISLSFVPSSSQIADIFTKSLTGPLHRSLMGKLG 378 >gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-type; Retrotransposon gag protein, putative [Medicago truncatula] Length = 120 Score = 112 bits (281), Expect = 2e-23 Identities = 53/81 (65%), Positives = 66/81 (81%) Frame = +1 Query: 1 AELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSG 180 +EL WL LL+DL I + PI + CDSQAAI+IA+NPVFHERTKHI++DCHFVREK+ S Sbjct: 34 SELQWLKYLLSDLGIYHPQPITIYCDSQAAIHIAENPVFHERTKHIEIDCHFVREKIKSS 93 Query: 181 LISLSYVPTKLQLADVFTKPL 243 LI+ SY+ + QLAD+FTKPL Sbjct: 94 LITASYIRSSDQLADIFTKPL 114 >gb|AFK44938.1| unknown [Lotus japonicus] Length = 107 Score = 112 bits (280), Expect = 3e-23 Identities = 53/93 (56%), Positives = 71/93 (76%) Frame = +1 Query: 4 ELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSGL 183 EL W+ ++L+D+ I +SP+ + CD+QAA++I+ NPVFHERTKHI++DCHF+REKL L Sbjct: 7 ELMWVGQILSDMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNL 66 Query: 184 ISLSYVPTKLQLADVFTKPLPGIQHHSILCKLG 282 IS SYV T Q ADVFTK L G+++ I KLG Sbjct: 67 ISTSYVRTGDQHADVFTKALNGVRNDFICNKLG 99 >emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] Length = 1813 Score = 111 bits (278), Expect = 5e-23 Identities = 55/93 (59%), Positives = 66/93 (70%) Frame = +1 Query: 4 ELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSGL 183 EL WL +L DL + P P+ CD+QAA+YIA NPVFHERTKHI++DCH VREKL +G+ Sbjct: 1629 ELTWLRYILKDLKVELDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGV 1688 Query: 184 ISLSYVPTKLQLADVFTKPLPGIQHHSILCKLG 282 I YV TK+QLADVFTK L Q + KLG Sbjct: 1689 IRPCYVSTKMQLADVFTKALGREQFEFLCTKLG 1721 >emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] Length = 1450 Score = 111 bits (277), Expect = 7e-23 Identities = 53/93 (56%), Positives = 68/93 (73%) Frame = +1 Query: 4 ELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSGL 183 EL WL LL L + + I + CDSQ+A+++AKNPVFHERTKHI++DCHF+R+ + GL Sbjct: 1350 ELKWLKGLLLSLGVHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFIRDAITDGL 1409 Query: 184 ISLSYVPTKLQLADVFTKPLPGIQHHSILCKLG 282 I+LSYVPT QLAD+FTK L Q +L KLG Sbjct: 1410 IALSYVPTVTQLADIFTKALRKKQFDYLLAKLG 1442