BLASTX nr result

ID: Bupleurum21_contig00026921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026921
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...   130   1e-28
gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-ty...   112   2e-23
gb|AFK44938.1| unknown [Lotus japonicus]                              112   3e-23
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   111   5e-23
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   111   7e-23

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/94 (64%), Positives = 76/94 (80%)
 Frame = +1

Query: 1   AELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSG 180
           AE+AW+ RLL DL++    P+ V CD+Q+AI+IAKNPVFHERTKHI+LDCHFVREKL  G
Sbjct: 285 AEIAWIVRLLHDLSVDFSLPVSVHCDNQSAIHIAKNPVFHERTKHIELDCHFVREKLLDG 344

Query: 181 LISLSYVPTKLQLADVFTKPLPGIQHHSILCKLG 282
           LISLS+VP+  Q+AD+FTK L G  H S++ KLG
Sbjct: 345 LISLSFVPSSSQIADIFTKSLTGPLHRSLMGKLG 378


>gb|ABO72547.1| Integrase, catalytic region; Zinc finger, CCHC-type;
           Retrotransposon gag protein, putative [Medicago
           truncatula]
          Length = 120

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/81 (65%), Positives = 66/81 (81%)
 Frame = +1

Query: 1   AELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSG 180
           +EL WL  LL+DL I +  PI + CDSQAAI+IA+NPVFHERTKHI++DCHFVREK+ S 
Sbjct: 34  SELQWLKYLLSDLGIYHPQPITIYCDSQAAIHIAENPVFHERTKHIEIDCHFVREKIKSS 93

Query: 181 LISLSYVPTKLQLADVFTKPL 243
           LI+ SY+ +  QLAD+FTKPL
Sbjct: 94  LITASYIRSSDQLADIFTKPL 114


>gb|AFK44938.1| unknown [Lotus japonicus]
          Length = 107

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/93 (56%), Positives = 71/93 (76%)
 Frame = +1

Query: 4   ELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSGL 183
           EL W+ ++L+D+ I  +SP+ + CD+QAA++I+ NPVFHERTKHI++DCHF+REKL   L
Sbjct: 7   ELMWVGQILSDMGIERISPMKLWCDNQAALHISSNPVFHERTKHIEVDCHFIREKLQQNL 66

Query: 184 ISLSYVPTKLQLADVFTKPLPGIQHHSILCKLG 282
           IS SYV T  Q ADVFTK L G+++  I  KLG
Sbjct: 67  ISTSYVRTGDQHADVFTKALNGVRNDFICNKLG 99


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/93 (59%), Positives = 66/93 (70%)
 Frame = +1

Query: 4    ELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSGL 183
            EL WL  +L DL +    P P+ CD+QAA+YIA NPVFHERTKHI++DCH VREKL +G+
Sbjct: 1629 ELTWLRYILKDLKVELDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGV 1688

Query: 184  ISLSYVPTKLQLADVFTKPLPGIQHHSILCKLG 282
            I   YV TK+QLADVFTK L   Q   +  KLG
Sbjct: 1689 IRPCYVSTKMQLADVFTKALGREQFEFLCTKLG 1721


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/93 (56%), Positives = 68/93 (73%)
 Frame = +1

Query: 4    ELAWLSRLLTDLTISNLSPIPVKCDSQAAIYIAKNPVFHERTKHIDLDCHFVREKLCSGL 183
            EL WL  LL  L + +   I + CDSQ+A+++AKNPVFHERTKHI++DCHF+R+ +  GL
Sbjct: 1350 ELKWLKGLLLSLGVHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFIRDAITDGL 1409

Query: 184  ISLSYVPTKLQLADVFTKPLPGIQHHSILCKLG 282
            I+LSYVPT  QLAD+FTK L   Q   +L KLG
Sbjct: 1410 IALSYVPTVTQLADIFTKALRKKQFDYLLAKLG 1442


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