BLASTX nr result

ID: Bupleurum21_contig00026919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026919
         (1617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   707   0.0  
gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   651   0.0  
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   651   0.0  
dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]                      651   0.0  
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   643   0.0  

>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
            gi|296089917|emb|CBI39736.3| unnamed protein product
            [Vitis vinifera]
          Length = 522

 Score =  707 bits (1824), Expect = 0.0
 Identities = 334/463 (72%), Positives = 384/463 (82%), Gaps = 1/463 (0%)
 Frame = -2

Query: 1544 VFSMDVREKSKSTLSKCSKHKRVPVYVMMPADSFGINTFGVPKIRKIKALTISLKALKLA 1365
            +FSMD REKS+ST  +   HKRVP++VMMP DSFGI+T G P+IR+IKALTISLKALKLA
Sbjct: 60   IFSMDAREKSRSTTLETPGHKRVPIFVMMPVDSFGIDTSGAPRIRRIKALTISLKALKLA 119

Query: 1364 GVHGVAVEVWWGIVEATSPLTYNWSLYEELFNLIADVGLKLQVALSFHSNMQLSEHGRG- 1188
            GVHG+AVEVWWGIVE  SP  YNWSLYEELF LI++ GLKL VALSFHSNM  S   +G 
Sbjct: 120  GVHGIAVEVWWGIVERFSPFVYNWSLYEELFKLISESGLKLHVALSFHSNMHSSSRVKGG 179

Query: 1187 VGLPQWIMEIGSFNKDIYYRDRNGNINGDCLTLGVDHYPLFCGRTALQCYEDFMLSFVDK 1008
            V LP WI+EIG  NKDIYYRD+NG  N D LTLGVD  PLFCGRTALQCYEDFM SF++K
Sbjct: 180  VSLPLWIVEIGDLNKDIYYRDQNGFSNDDYLTLGVDELPLFCGRTALQCYEDFMFSFINK 239

Query: 1007 FGTMMGTAIKEISVGLGPCGELRYPAHPSGDGRWQFPGIGEFQCYDKYMMEDLQKAASRV 828
            F + +G+ I+EISVGLGP GELRYPAHP GDGRW+FPGIGEFQCYDKYMM DL+ AA + 
Sbjct: 240  FESFIGSVIEEISVGLGPSGELRYPAHPFGDGRWRFPGIGEFQCYDKYMMRDLKIAACQE 299

Query: 827  GKPHWGKRGPQNAGGYNSIPLGIPFYEEGQEGFLSDYGQFFLEWYSDKLIGHADAILAKA 648
            GKP WG +GPQNAG YNS+P G+PF+EEGQE FLSDYG+FFLEWYS +LI HADAIL KA
Sbjct: 300  GKPQWGDKGPQNAGYYNSLPSGVPFFEEGQESFLSDYGRFFLEWYSGRLIRHADAILTKA 359

Query: 647  ANLFEIYEASEQQSTLLVVKLGTIYWWFQTMSHPAELTAGYYNTALRDGYDPLALMLSRH 468
            AN+ + Y+ S++ S LLV K+G IYWW+ T+SHPAELTAGYYNTALRDGYDP+A MLSRH
Sbjct: 360  ANMLKKYQESKKSSVLLVAKIGGIYWWYHTLSHPAELTAGYYNTALRDGYDPVASMLSRH 419

Query: 467  GATLQIDCFEILDREHPSTYFCSAEGLLQQIRGVSEKRVIHLTGRNSRERFDKAGLSQIY 288
            GA L I C E++D E P TY CS E LLQQI  VS+KR++HLTGRN+ ERFDKAGL QI+
Sbjct: 420  GAALHISCLEMMDNETPPTYLCSPERLLQQIWTVSKKRIVHLTGRNTNERFDKAGLWQIH 479

Query: 287  TNCYQLSEEAVKSFTYFRMNDKIFRVENWSNFVPFVKKMSTEM 159
             NCY    EAV+SFTYFRMN+KIFR ENW+NFVPFV+KMST+M
Sbjct: 480  ANCYHPQAEAVRSFTYFRMNEKIFRAENWNNFVPFVRKMSTDM 522


>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
            gi|25054836|gb|AAN71908.1| putative beta-amylase
            [Arabidopsis thaliana]
          Length = 484

 Score =  651 bits (1679), Expect = 0.0
 Identities = 307/463 (66%), Positives = 365/463 (78%)
 Frame = -2

Query: 1547 RVFSMDVREKSKSTLSKCSKHKRVPVYVMMPADSFGINTFGVPKIRKIKALTISLKALKL 1368
            R+FSMD REKS+S +   S+HKRVPV+VMMP D+FGI+  G PKI+++KALT+SLKALKL
Sbjct: 22   RIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKL 81

Query: 1367 AGVHGVAVEVWWGIVEATSPLTYNWSLYEELFNLIADVGLKLQVALSFHSNMQLSEHGRG 1188
            AGVHG+AVEVWWGIVE  SPL + WSLYEELF LI++ GLKL VAL FHSNM L     G
Sbjct: 82   AGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGG 141

Query: 1187 VGLPQWIMEIGSFNKDIYYRDRNGNINGDCLTLGVDHYPLFCGRTALQCYEDFMLSFVDK 1008
            + LP WI EIG  NKDIYYRD++G  N D LTLGVD  PLF GRTA+QCYEDFMLSF  K
Sbjct: 142  ISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTK 201

Query: 1007 FGTMMGTAIKEISVGLGPCGELRYPAHPSGDGRWQFPGIGEFQCYDKYMMEDLQKAASRV 828
            F   +G  I+EIS+GLGP GELRYPAHPSGDGRW+FPGIGEFQC+DKYMMEDL   AS+ 
Sbjct: 202  FEPYLGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPGIGEFQCHDKYMMEDLMAVASQE 261

Query: 827  GKPHWGKRGPQNAGGYNSIPLGIPFYEEGQEGFLSDYGQFFLEWYSDKLIGHADAILAKA 648
            GKP WG R P N G YNS P G+PF+EEG + FLSDYG+FFLEWYS KLI HADAILAKA
Sbjct: 262  GKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKA 321

Query: 647  ANLFEIYEASEQQSTLLVVKLGTIYWWFQTMSHPAELTAGYYNTALRDGYDPLALMLSRH 468
            A++    +  E+ S +LV K+G IYWW++T SHPAELTAGYYNT+LRDGYDP+A +LSRH
Sbjct: 322  ADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSHPAELTAGYYNTSLRDGYDPVASVLSRH 381

Query: 467  GATLQIDCFEILDREHPSTYFCSAEGLLQQIRGVSEKRVIHLTGRNSRERFDKAGLSQIY 288
            GA L I C ++ D E P  Y CS EGL +QI  VS+K  IH+TGRN+ ERFD+ GL QI 
Sbjct: 382  GAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIR 441

Query: 287  TNCYQLSEEAVKSFTYFRMNDKIFRVENWSNFVPFVKKMSTEM 159
             NC Q + + ++SFT+ RMN+KIFRVENW+NFVPF+++MS +M
Sbjct: 442  ENCVQPNGDTLRSFTFCRMNEKIFRVENWNNFVPFIRQMSADM 484


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
            gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName: Full=Inactive
            beta-amylase 4, chloroplastic; AltName: Full=Inactive
            beta-amylase 6; Flags: Precursor
            gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
            thaliana] gi|332009286|gb|AED96669.1| inactive
            beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  651 bits (1679), Expect = 0.0
 Identities = 307/463 (66%), Positives = 365/463 (78%)
 Frame = -2

Query: 1547 RVFSMDVREKSKSTLSKCSKHKRVPVYVMMPADSFGINTFGVPKIRKIKALTISLKALKL 1368
            R+FSMD REKS+S +   S+HKRVPV+VMMP D+FGI+  G PKI+++KALT+SLKALKL
Sbjct: 69   RIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKL 128

Query: 1367 AGVHGVAVEVWWGIVEATSPLTYNWSLYEELFNLIADVGLKLQVALSFHSNMQLSEHGRG 1188
            AGVHG+AVEVWWGIVE  SPL + WSLYEELF LI++ GLKL VAL FHSNM L     G
Sbjct: 129  AGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGG 188

Query: 1187 VGLPQWIMEIGSFNKDIYYRDRNGNINGDCLTLGVDHYPLFCGRTALQCYEDFMLSFVDK 1008
            + LP WI EIG  NKDIYYRD++G  N D LTLGVD  PLF GRTA+QCYEDFMLSF  K
Sbjct: 189  ISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTK 248

Query: 1007 FGTMMGTAIKEISVGLGPCGELRYPAHPSGDGRWQFPGIGEFQCYDKYMMEDLQKAASRV 828
            F   +G  I+EIS+GLGP GELRYPAHPSGDGRW+FPGIGEFQC+DKYMMEDL   AS+ 
Sbjct: 249  FEPYLGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPGIGEFQCHDKYMMEDLMAVASQE 308

Query: 827  GKPHWGKRGPQNAGGYNSIPLGIPFYEEGQEGFLSDYGQFFLEWYSDKLIGHADAILAKA 648
            GKP WG R P N G YNS P G+PF+EEG + FLSDYG+FFLEWYS KLI HADAILAKA
Sbjct: 309  GKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKA 368

Query: 647  ANLFEIYEASEQQSTLLVVKLGTIYWWFQTMSHPAELTAGYYNTALRDGYDPLALMLSRH 468
            A++    +  E+ S +LV K+G IYWW++T SHPAELTAGYYNT+LRDGYDP+A +LSRH
Sbjct: 369  ADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSHPAELTAGYYNTSLRDGYDPVASVLSRH 428

Query: 467  GATLQIDCFEILDREHPSTYFCSAEGLLQQIRGVSEKRVIHLTGRNSRERFDKAGLSQIY 288
            GA L I C ++ D E P  Y CS EGL +QI  VS+K  IH+TGRN+ ERFD+ GL QI 
Sbjct: 429  GAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIR 488

Query: 287  TNCYQLSEEAVKSFTYFRMNDKIFRVENWSNFVPFVKKMSTEM 159
             NC Q + + ++SFT+ RMN+KIFRVENW+NFVPF+++MS +M
Sbjct: 489  ENCVQPNGDTLRSFTFCRMNEKIFRVENWNNFVPFIRQMSADM 531


>dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]
          Length = 498

 Score =  651 bits (1679), Expect = 0.0
 Identities = 307/463 (66%), Positives = 365/463 (78%)
 Frame = -2

Query: 1547 RVFSMDVREKSKSTLSKCSKHKRVPVYVMMPADSFGINTFGVPKIRKIKALTISLKALKL 1368
            R+FSMD REKS+S +   S+HKRVPV+VMMP D+FGI+  G PKI+++KALT+SLKALKL
Sbjct: 36   RIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKL 95

Query: 1367 AGVHGVAVEVWWGIVEATSPLTYNWSLYEELFNLIADVGLKLQVALSFHSNMQLSEHGRG 1188
            AGVHG+AVEVWWGIVE  SPL + WSLYEELF LI++ GLKL VAL FHSNM L     G
Sbjct: 96   AGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGG 155

Query: 1187 VGLPQWIMEIGSFNKDIYYRDRNGNINGDCLTLGVDHYPLFCGRTALQCYEDFMLSFVDK 1008
            + LP WI EIG  NKDIYYRD++G  N D LTLGVD  PLF GRTA+QCYEDFMLSF  K
Sbjct: 156  ISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTK 215

Query: 1007 FGTMMGTAIKEISVGLGPCGELRYPAHPSGDGRWQFPGIGEFQCYDKYMMEDLQKAASRV 828
            F   +G  I+EIS+GLGP GELRYPAHPSGDGRW+FPGIGEFQC+DKYMMEDL   AS+ 
Sbjct: 216  FEPYLGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPGIGEFQCHDKYMMEDLMAVASQE 275

Query: 827  GKPHWGKRGPQNAGGYNSIPLGIPFYEEGQEGFLSDYGQFFLEWYSDKLIGHADAILAKA 648
            GKP WG R P N G YNS P G+PF+EEG + FLSDYG+FFLEWYS KLI HADAILAKA
Sbjct: 276  GKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKA 335

Query: 647  ANLFEIYEASEQQSTLLVVKLGTIYWWFQTMSHPAELTAGYYNTALRDGYDPLALMLSRH 468
            A++    +  E+ S +LV K+G IYWW++T SHPAELTAGYYNT+LRDGYDP+A +LSRH
Sbjct: 336  ADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSHPAELTAGYYNTSLRDGYDPVASVLSRH 395

Query: 467  GATLQIDCFEILDREHPSTYFCSAEGLLQQIRGVSEKRVIHLTGRNSRERFDKAGLSQIY 288
            GA L I C ++ D E P  Y CS EGL +QI  VS+K  IH+TGRN+ ERFD+ GL QI 
Sbjct: 396  GAALNIPCLDMADSEIPEKYLCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIR 455

Query: 287  TNCYQLSEEAVKSFTYFRMNDKIFRVENWSNFVPFVKKMSTEM 159
             NC Q + + ++SFT+ RMN+KIFRVENW+NFVPF+++MS +M
Sbjct: 456  ENCVQPNGDTLRSFTFCRMNEKIFRVENWNNFVPFIRQMSADM 498


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
            gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 531

 Score =  643 bits (1659), Expect = 0.0
 Identities = 305/463 (65%), Positives = 360/463 (77%)
 Frame = -2

Query: 1547 RVFSMDVREKSKSTLSKCSKHKRVPVYVMMPADSFGINTFGVPKIRKIKALTISLKALKL 1368
            R+FSMD REKS+S +   S+HKRVPV+VMMP D+FGI+  G PKI+++KALT+SLKALKL
Sbjct: 69   RIFSMDAREKSRSFVLVSSRHKRVPVFVMMPFDTFGIDASGCPKIKRLKALTVSLKALKL 128

Query: 1367 AGVHGVAVEVWWGIVEATSPLTYNWSLYEELFNLIADVGLKLQVALSFHSNMQLSEHGRG 1188
            AGVHG+AVEVWWGIVE   PL + WSLYEELF LI++ GLKL VAL FHSNM L     G
Sbjct: 129  AGVHGIAVEVWWGIVERFCPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGG 188

Query: 1187 VGLPQWIMEIGSFNKDIYYRDRNGNINGDCLTLGVDHYPLFCGRTALQCYEDFMLSFVDK 1008
            + LP WI EIG  NKDIYYRD+ G  N D LTLGVD  PLF GRTA+QCYEDFMLSF  K
Sbjct: 189  ISLPLWIREIGDVNKDIYYRDKRGLSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTK 248

Query: 1007 FGTMMGTAIKEISVGLGPCGELRYPAHPSGDGRWQFPGIGEFQCYDKYMMEDLQKAASRV 828
            F    G  I+EIS+GLGP GELRYPAHPSGDGRW+FPGIGEFQC+DKYMMEDL   AS+ 
Sbjct: 249  FEPYFGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPGIGEFQCHDKYMMEDLMAVASQE 308

Query: 827  GKPHWGKRGPQNAGGYNSIPLGIPFYEEGQEGFLSDYGQFFLEWYSDKLIGHADAILAKA 648
            GKP WG R P N G YNS P G+PF+EEG + FLSDYG+FFLEWYS KLI HADAILAKA
Sbjct: 309  GKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKA 368

Query: 647  ANLFEIYEASEQQSTLLVVKLGTIYWWFQTMSHPAELTAGYYNTALRDGYDPLALMLSRH 468
            A++    +  E+ S +LV K+G IYWW++T SHPAELTAGYYNTALRDGYDP+A +LSRH
Sbjct: 369  ADVLRRRQEDEKSSVMLVAKIGGIYWWYKTSSHPAELTAGYYNTALRDGYDPVASVLSRH 428

Query: 467  GATLQIDCFEILDREHPSTYFCSAEGLLQQIRGVSEKRVIHLTGRNSRERFDKAGLSQIY 288
            GA L I C ++ D E P  Y CS EGL +QI  VS+K  I +TGRN+ ERFD+ GL QI 
Sbjct: 429  GAALHIPCLDMADSETPEKYLCSPEGLRKQIHDVSKKWTIQVTGRNTSERFDEMGLRQIR 488

Query: 287  TNCYQLSEEAVKSFTYFRMNDKIFRVENWSNFVPFVKKMSTEM 159
             NC Q + + ++SFT+ RMN+KIFR ENW+NFVPF+++MS +M
Sbjct: 489  ENCVQPNGDTLRSFTFCRMNEKIFRGENWNNFVPFIRQMSADM 531


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