BLASTX nr result

ID: Bupleurum21_contig00026916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026916
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278376.1| PREDICTED: uncharacterized protein LOC100261...   119   3e-25
ref|XP_002524448.1| conserved hypothetical protein [Ricinus comm...   117   8e-25
ref|XP_002889010.1| hypothetical protein ARALYDRAFT_339695 [Arab...   115   4e-24
ref|XP_002303635.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
gb|AFK48714.1| unknown [Lotus japonicus]                              112   4e-23

>ref|XP_002278376.1| PREDICTED: uncharacterized protein LOC100261115 [Vitis vinifera]
           gi|296081638|emb|CBI20643.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score =  119 bits (297), Expect = 3e-25
 Identities = 47/56 (83%), Positives = 53/56 (94%)
 Frame = +2

Query: 224 CGVCKGKGFYKCKLCKGNSTIQWSPLYDPLVINPCLCPTCDGNKVQKCLNCLGNCY 391
           CGVC+GKG+Y CKLCKGNSTI+WSPLYDP+VINPC+CPTCDGN+VQKCLNCLG  Y
Sbjct: 52  CGVCRGKGYYICKLCKGNSTIEWSPLYDPVVINPCVCPTCDGNRVQKCLNCLGKGY 107


>ref|XP_002524448.1| conserved hypothetical protein [Ricinus communis]
           gi|223536236|gb|EEF37888.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 143

 Score =  117 bits (294), Expect = 8e-25
 Identities = 48/69 (69%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
 Frame = +2

Query: 188 NSQKLKI-KNGKLCGVCKGKGFYKCKLCKGNSTIQWSPLYDPLVINPCLCPTCDGNKVQK 364
           ++ +LK+ KN   CGVC+GKGFY CKLCKGN+TI+WSPLYDP+  NPCLCPTCDG++VQ+
Sbjct: 74  HASELKLRKNASPCGVCRGKGFYICKLCKGNATIKWSPLYDPIAFNPCLCPTCDGHRVQR 133

Query: 365 CLNCLGNCY 391
           CLNCLG  Y
Sbjct: 134 CLNCLGKGY 142


>ref|XP_002889010.1| hypothetical protein ARALYDRAFT_339695 [Arabidopsis lyrata subsp.
           lyrata] gi|297334851|gb|EFH65269.1| hypothetical protein
           ARALYDRAFT_339695 [Arabidopsis lyrata subsp. lyrata]
          Length = 105

 Score =  115 bits (288), Expect = 4e-24
 Identities = 47/72 (65%), Positives = 58/72 (80%)
 Frame = +2

Query: 176 AINVNSQKLKIKNGKLCGVCKGKGFYKCKLCKGNSTIQWSPLYDPLVINPCLCPTCDGNK 355
           A+    ++ + K+G  C  C+GKGFY CKLCKGN+TI+WSPLYDP+ INPCLCPTCDG++
Sbjct: 33  ALRYTIEEKRKKSGLACRACRGKGFYICKLCKGNATIKWSPLYDPVCINPCLCPTCDGHR 92

Query: 356 VQKCLNCLGNCY 391
           VQKCLNCLG  Y
Sbjct: 93  VQKCLNCLGKEY 104


>ref|XP_002303635.1| predicted protein [Populus trichocarpa] gi|222841067|gb|EEE78614.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  114 bits (284), Expect = 1e-23
 Identities = 47/65 (72%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
 Frame = +2

Query: 200 LKIKNGKL-CGVCKGKGFYKCKLCKGNSTIQWSPLYDPLVINPCLCPTCDGNKVQKCLNC 376
           LK++   L CG C+GKGFY CKLCKGN++I WSPLYDP+ INPCLCPTCDGN+VQ+CLNC
Sbjct: 40  LKLRRVALPCGACRGKGFYICKLCKGNASIHWSPLYDPVAINPCLCPTCDGNRVQRCLNC 99

Query: 377 LGNCY 391
           LG  Y
Sbjct: 100 LGKGY 104


>gb|AFK48714.1| unknown [Lotus japonicus]
          Length = 104

 Score =  112 bits (279), Expect = 4e-23
 Identities = 46/72 (63%), Positives = 57/72 (79%)
 Frame = +2

Query: 176 AINVNSQKLKIKNGKLCGVCKGKGFYKCKLCKGNSTIQWSPLYDPLVINPCLCPTCDGNK 355
           A++  S+K + K    C VC+GKGFY CKLC GN+TI WSP+YDP+ INPCLCPTC+GN+
Sbjct: 32  ALHFASEKKRKKVALPCLVCRGKGFYICKLCNGNATIAWSPMYDPIAINPCLCPTCEGNR 91

Query: 356 VQKCLNCLGNCY 391
           VQ+CLNCLG  Y
Sbjct: 92  VQRCLNCLGKGY 103


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