BLASTX nr result

ID: Bupleurum21_contig00026906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026906
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277002.1| PREDICTED: BTB/POZ domain-containing protein...   182   7e-44
ref|XP_002534000.1| ubiquitin-protein ligase, putative [Ricinus ...   168   1e-39
emb|CBI30274.3| unnamed protein product [Vitis vinifera]              167   2e-39
ref|XP_003625779.1| LRR and BTB/POZ domain-containing protein FB...   165   6e-39
ref|XP_002879607.1| predicted protein [Arabidopsis lyrata subsp....   161   1e-37

>ref|XP_002277002.1| PREDICTED: BTB/POZ domain-containing protein FBL11-like [Vitis
           vinifera]
          Length = 980

 Score =  182 bits (461), Expect = 7e-44
 Identities = 92/208 (44%), Positives = 132/208 (63%), Gaps = 2/208 (0%)
 Frame = +2

Query: 50  SDDDDDRYILLVCIDIHCTDTTTVNLDDDAILSTAEIDRWNLSSIQSRQFVKIKEDRRRL 229
           + +++   I LVC + +  +      +D+  +STAE   W+L +I S + VK++ +R RL
Sbjct: 2   ASNEEGDVIFLVCTNPNSIEEPIA--EDEIYISTAETSSWDLPTILSHRIVKVQSNRNRL 59

Query: 230 IESSTYFRGLLTGSFSDSSLDCITIQWNLQFISDYLKFIHGHSVEITSDNXXXXXXXXXX 409
           I+ S+YF  LL G+F  S    I+IQWNL+   + LKFI+G  +++T  N          
Sbjct: 60  IQHSSYFHSLLCGNFRKSCHGSISIQWNLEAFINILKFIYGCPLDVTPQNFIPLYEGALF 119

Query: 410 XXVDMLLLNCKMWFTEVTSVKDFPTL--QLDSLINIWKFSLEHANDSFPELCTNYLAKNF 583
             VD LLL CK+WF+E+ S K   +L  QLD LI+IW F LEHAND  PELCT YLA+NF
Sbjct: 120 FGVDTLLLKCKIWFSELISSKGPLSLQIQLDDLIHIWDFGLEHANDFIPELCTMYLARNF 179

Query: 584 VWAISYNSFSDIPYNLLHCCLKHPQLTV 667
           +WA+S NS+ ++PYN+L  C +HP+LTV
Sbjct: 180 MWAMSCNSYGNLPYNMLIACTRHPELTV 207


>ref|XP_002534000.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223526002|gb|EEF28381.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 846

 Score =  168 bits (425), Expect = 1e-39
 Identities = 78/151 (51%), Positives = 106/151 (70%), Gaps = 2/151 (1%)
 Frame = +2

Query: 224 RLIESSTYFRGLLTGSFSDSSLDCITIQWNLQFISDYLKFIHGHSVEITSDNXXXXXXXX 403
           RL+E S+YF GLL+GSFS+S+L+C++IQWN++   + LKF++G  V++TS +        
Sbjct: 6   RLVEQSSYFHGLLSGSFSESNLNCVSIQWNMEVFVNVLKFVYGCQVDVTSKSFLSLFEAA 65

Query: 404 XXXXVDMLLLNCKMWFTEVTSVKDFPTL--QLDSLINIWKFSLEHANDSFPELCTNYLAK 577
                ++LLL CK WF+EVTS K    L  QL+ LI+IW F LEHAND  PELC +YLA+
Sbjct: 66  LYFGAELLLLKCKTWFSEVTSSKRSGLLKVQLEDLIHIWNFGLEHANDFVPELCASYLAR 125

Query: 578 NFVWAISYNSFSDIPYNLLHCCLKHPQLTVH 670
           NF+WA+    F D+PYNLL  C+KHP LTV+
Sbjct: 126 NFMWAMYSKFFGDVPYNLLFHCIKHPHLTVY 156


>emb|CBI30274.3| unnamed protein product [Vitis vinifera]
          Length = 1010

 Score =  167 bits (423), Expect = 2e-39
 Identities = 93/238 (39%), Positives = 132/238 (55%), Gaps = 32/238 (13%)
 Frame = +2

Query: 50  SDDDDDRYILLVCIDIHCTDTTTVNLDDDAILSTAEIDRWNLSSIQSRQFVKIKEDRRRL 229
           + +++   I LVC + +  +      +D+  +STAE   W+L +I S + VK++ +R RL
Sbjct: 2   ASNEEGDVIFLVCTNPNSIEEPIA--EDEIYISTAETSSWDLPTILSHRIVKVQSNRNRL 59

Query: 230 IESSTYFRGLLTGSFSDSSLDCITIQWNLQFISDYLKFIHGHSVEITSDNXXXXXXXXXX 409
           I+ S+YF  LL G+F  S    I+IQWNL+   + LKFI+G  +++T  N          
Sbjct: 60  IQHSSYFHSLLCGNFRKSCHGSISIQWNLEAFINILKFIYGCPLDVTPQNFIPLYEGALF 119

Query: 410 XXVDMLLLNCKMWFTEVTSVKDFPTLQ--LDSLINIWKFSLEHANDSFPELCTNYLAKNF 583
             VD LLL CK+WF+E+ S K   +LQ  LD LI+IW F LEHAND  PELCT YLA+NF
Sbjct: 120 FGVDTLLLKCKIWFSELISSKGPLSLQIQLDDLIHIWDFGLEHANDFIPELCTMYLARNF 179

Query: 584 V------------------------------WAISYNSFSDIPYNLLHCCLKHPQLTV 667
           V                              WA+S NS+ ++PYN+L  C +HP+LTV
Sbjct: 180 VCIDFYLTFEHLLRTSKLFSNYIKRMMGSLMWAMSCNSYGNLPYNMLIACTRHPELTV 237


>ref|XP_003625779.1| LRR and BTB/POZ domain-containing protein FBL11 [Medicago
           truncatula] gi|355500794|gb|AES81997.1| LRR and BTB/POZ
           domain-containing protein FBL11 [Medicago truncatula]
          Length = 1039

 Score =  165 bits (418), Expect = 6e-39
 Identities = 92/208 (44%), Positives = 124/208 (59%), Gaps = 2/208 (0%)
 Frame = +2

Query: 50  SDDDDDRYILLVCIDIHCTDTTTVNLDDDAILSTAEIDRWNLSSIQSRQFVKIKEDRRRL 229
           SDD+DD+ ILLVC +   T     N   +  L+  +I   +LS+  +   +K+   R RL
Sbjct: 6   SDDEDDQLILLVCTNPTPTPDPYHNHPIEEFLT--DIILSDLSTFLNFHTIKLHAHRNRL 63

Query: 230 IESSTYFRGLLTGSFSDSSLDCITIQWNLQFISDYLKFIHGHSVEITSDNXXXXXXXXXX 409
           I  S YFRGLL+GSFS+S L  ITI WNL      LK I+G S++ITS N          
Sbjct: 64  IHHSLYFRGLLSGSFSESCLGSITINWNLPVFMQILKHIYGCSLDITSQNVLPLYEGALY 123

Query: 410 XXVDMLLLNCKMWFTEVTSVKDFPT--LQLDSLINIWKFSLEHANDSFPELCTNYLAKNF 583
             VD L++ C+ WF+EV S  +FP+  +Q + LI IWKF+ +HA+D    LC  YLA+NF
Sbjct: 124 FGVDTLIVKCEDWFSEVFSRNEFPSTQIQTEDLIQIWKFASDHASDFILHLCIGYLARNF 183

Query: 584 VWAISYNSFSDIPYNLLHCCLKHPQLTV 667
           +WA   N F ++PYNLL   +KHP LTV
Sbjct: 184 MWAKKNNFFREVPYNLLLSSVKHPHLTV 211


>ref|XP_002879607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325446|gb|EFH55866.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 941

 Score =  161 bits (407), Expect = 1e-37
 Identities = 83/204 (40%), Positives = 116/204 (56%), Gaps = 2/204 (0%)
 Frame = +2

Query: 65  DRYILLVCIDIHCTDTTTVNLDDDAILSTAEIDRWNLSSIQSRQFVKIKEDRRRLIESST 244
           D ++ LV  +         +   D  +S +EI  WNLS I S   VK++  R RLI+ S+
Sbjct: 8   DEFVTLVVKNPCYQQDDASSSSQDISISASEIASWNLSEILSYGRVKVRAHRTRLIQESS 67

Query: 245 YFRGLLTGSFSDSSLDCITIQWNLQFISDYLKFIHGHSVEITSDNXXXXXXXXXXXXVDM 424
           YF GLL+GSFS+S LD I+++WN +   + L F++G+ +EITS +            V+ 
Sbjct: 68  YFHGLLSGSFSESGLDHISVEWNPETFLNLLMFLYGYDIEITSTSFLPLFETALYFGVEK 127

Query: 425 LLLNCKMWFTEVTSVKD--FPTLQLDSLINIWKFSLEHANDSFPELCTNYLAKNFVWAIS 598
           LL  CK W + +    D   P L+L  LI +W F LEHA +  P+LC  YLAKNF+   S
Sbjct: 128 LLSKCKSWLSVLALSNDTALPKLELSDLIQMWSFGLEHAGEFVPDLCVAYLAKNFMLVKS 187

Query: 599 YNSFSDIPYNLLHCCLKHPQLTVH 670
              F ++PY LL CC+KH  LTVH
Sbjct: 188 DKYFGNVPYELLMCCIKHSHLTVH 211


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