BLASTX nr result

ID: Bupleurum21_contig00026897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026897
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               309   3e-82
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]   149   5e-34
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]   145   7e-33
ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854...   142   5e-32
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]   142   5e-32

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  309 bits (792), Expect = 3e-82
 Identities = 159/214 (74%), Positives = 178/214 (83%)
 Frame = -2

Query: 656 MAFGKDDSLQSINVQLDGTNYSYWSYVMKNFLRGKSLWSYVRATDTKVKPTDSKADDYAN 477
           MA  +DDSLQS++V+LDG NYSYWSYVM+NFL+GK +W YV  + T V P +++  D  +
Sbjct: 1   MATERDDSLQSVSVRLDGKNYSYWSYVMRNFLKGKKMWGYV--SGTYVVPKNTEEGDTVS 58

Query: 476 LLDTWEADNSKIITWINNSVTRSIGVQLAKYETAKEVWDHLSRLYTQSNFAKQYQLETDI 297
           + DTWEA+N+KIITWINN V  SIG QLAKYETAKEVWDHL RL+TQSNFAKQYQLE DI
Sbjct: 59  I-DTWEANNAKIITWINNYVEHSIGTQLAKYETAKEVWDHLQRLFTQSNFAKQYQLENDI 117

Query: 296 RALQQNNMSIQEFYSAMSVLWDQLALTEPAELSAFSAYINRREQQRLVQFLMALRSDFEP 117
           RAL Q NMSIQEFYSAM+ LWDQLALTE  EL A  AYI RREQQRLVQFL ALRSDFE 
Sbjct: 118 RALHQKNMSIQEFYSAMTDLWDQLALTESVELKACGAYIERREQQRLVQFLTALRSDFEG 177

Query: 116 LRGSILHRTPLPSVDSVVNELLAEEIRLQSQGIK 15
           LRGSILHR+PLPSVDSVV+ELLAEEIRLQS   K
Sbjct: 178 LRGSILHRSPLPSVDSVVSELLAEEIRLQSYSEK 211


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score =  149 bits (376), Expect = 5e-34
 Identities = 80/162 (49%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
 Frame = -2

Query: 644 KDDSLQSINVQLDGTNYSYWSYVMKNFLRGKSLWSYVRATDTKVKPTDSKADDYANLLDT 465
           +DDS QSI+V+LDG NYSYWSYVM+NFL+GK +  YV    +K  P + + + Y ++L++
Sbjct: 5   RDDSXQSISVRLDGNNYSYWSYVMRNFLKGKXMXGYVSGVLSK--PINDRDEKYIDMLES 62

Query: 464 WEADNSKIITWINNSVTRSIGVQLAKYETAKEVWDHLS--RLYTQSNFAKQYQLETDIRA 291
            EA+NSKI+  INN    SIG+QLAKYE AK+VWDHL+   ++ Q N             
Sbjct: 63  XEANNSKIJIXINNFXEHSIGIQLAKYEIAKQVWDHLALXLIFEQCN------------- 109

Query: 290 LQQNNMSIQEFYSAMSVLWDQLALTEPAELSAFSAYINRREQ 165
                MS QEFYS MS LWDQL LTE A L +   Y+ RRE+
Sbjct: 110 ---KRMSTQEFYSTMSDLWDQLELTEXASLQSNVEYLTRRER 148


>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
          Length = 2471

 Score =  145 bits (366), Expect = 7e-33
 Identities = 82/220 (37%), Positives = 131/220 (59%), Gaps = 9/220 (4%)
 Frame = -2

Query: 665 GSIMAFG---KDDSL-QSINVQLDGT-NYSYWSYVMKNFLRGKSLWSYVRATDT-KVKPT 504
           G+++A G   KD  L + IN  L+G  NY  WS  M++FL+G+ LW Y  +  T  VK  
Sbjct: 315 GNLVAIGAHKKDIFLSRPINTILEGNKNYLSWSQAMRSFLKGRMLWHYCTSVMTIPVKGA 374

Query: 503 DSKADDYANLLDTWEADNSKIITWINNSVTRSIGVQLAKYETAKEVWDHLSRLYTQSNFA 324
                 + N +  W++ N  I+TWI N+   SI   +  ++ AK  WD L++ Y+ ++ +
Sbjct: 375 SEGNAVFLNRMIEWDSHNHMILTWIRNTSIPSISNLMGSFDDAKSAWDMLAKRYSTTHGS 434

Query: 323 KQYQLETDIRALQQN-NMSIQEFYSAMSVLWDQLALTEPAELSAFSA--YINRREQQRLV 153
            +YQL  ++  L+Q    SI ++Y  +  +WDQ+ L+ P    + +A  Y + R++ RL 
Sbjct: 435 LKYQLVVELHQLRQEPGQSINDYYDQLRFIWDQIDLSYPTWTCSKNAQQYASIRDEFRLY 494

Query: 152 QFLMALRSDFEPLRGSILHRTPLPSVDSVVNELLAEEIRL 33
           +FLM+L  DFEP+RG +L+R+P PS+D+ VNEL+ EE RL
Sbjct: 495 EFLMSLHKDFEPIRGQLLNRSPAPSLDTAVNELVREEARL 534


>ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854333 [Vitis vinifera]
          Length = 1689

 Score =  142 bits (359), Expect = 5e-32
 Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 2/206 (0%)
 Frame = -2

Query: 617 VQLDGTNYSYWSYVMKNFLRGKSLWSYVRATDTKVKPTDSKADDYANLLDTWEADNSKII 438
           V+  GTNYS W++  + FL+GK LW ++  TD +   T  K+ D      +W   +++I+
Sbjct: 8   VKFTGTNYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFEKSQD-VGFSPSWAVLDARIM 66

Query: 437 TWINNSVTRSIGVQLAKYETAKEVWDHLSRLYTQSNFAKQYQLETDIRALQQNNMSIQEF 258
           +W+  SV   I   L  + +A+ +W +L ++Y Q N A+++QLE  I   Q  ++SIQ++
Sbjct: 67  SWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQDY 126

Query: 257 YSAMSVLWDQLA--LTEPAELSAFSAYINRREQQRLVQFLMALRSDFEPLRGSILHRTPL 84
           YSA   LW + A  +T    ++A S         R  QFLM LR ++E +R S+L+R+P+
Sbjct: 127 YSAFLTLWHEYADLVTADVPIAALSTIQTIHATTRRDQFLMKLRLEYESVRSSLLNRSPV 186

Query: 83  PSVDSVVNELLAEEIRLQSQGIKENS 6
           PS+D    ELL EE RL +Q I E S
Sbjct: 187 PSLDICFGELLREEQRLSTQAILEQS 212


>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
          Length = 845

 Score =  142 bits (359), Expect = 5e-32
 Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 2/206 (0%)
 Frame = -2

Query: 617 VQLDGTNYSYWSYVMKNFLRGKSLWSYVRATDTKVKPTDSKADDYANLLDTWEADNSKII 438
           V+  GTNYS W++  + FL+GK LW ++  TD +   T  K+ D      +W   +++I+
Sbjct: 8   VKFTGTNYSTWAFQFELFLKGKDLWGHIDGTDVEKPSTFEKSQD-VGFSPSWAVLDARIM 66

Query: 437 TWINNSVTRSIGVQLAKYETAKEVWDHLSRLYTQSNFAKQYQLETDIRALQQNNMSIQEF 258
           +W+  SV   I   L  + +A+ +W +L ++Y Q N A+++QLE  I   Q  ++SIQ++
Sbjct: 67  SWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMFQHGSLSIQDY 126

Query: 257 YSAMSVLWDQLA--LTEPAELSAFSAYINRREQQRLVQFLMALRSDFEPLRGSILHRTPL 84
           YSA   LW + A  +T    ++A S         R  QFLM LR ++E +R S+L+R+P+
Sbjct: 127 YSAFLTLWHEYADLVTADVPIAALSTIQXIHATTRRDQFLMKLRPEYESVRSSLLNRSPV 186

Query: 83  PSVDSVVNELLAEEIRLQSQGIKENS 6
           PS+D    ELL EE RL +Q I E S
Sbjct: 187 PSLDICFGELLREEQRLSTQAILEQS 212


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