BLASTX nr result

ID: Bupleurum21_contig00026891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026891
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21002.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264...    69   3e-10
ref|XP_004139421.1| PREDICTED: uncharacterized protein LOC101208...    67   1e-09
gb|AFK44933.1| unknown [Medicago truncatula]                           66   3e-09
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...    66   3e-09

>emb|CBI21002.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/49 (67%), Positives = 39/49 (79%)
 Frame = -3

Query: 336 AYRRTLVELYASGPLSWEKEGMLTNLRITLHVSNDEHLMEGQSFGGFGI 190
           AYRRTL  L+ASGPLSWE+  MLTNLR +LH+SNDEHLME ++    GI
Sbjct: 334 AYRRTLAALHASGPLSWEQSTMLTNLRCSLHISNDEHLMELKNLISAGI 382


>ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264564 [Vitis vinifera]
          Length = 440

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/49 (67%), Positives = 39/49 (79%)
 Frame = -3

Query: 336 AYRRTLVELYASGPLSWEKEGMLTNLRITLHVSNDEHLMEGQSFGGFGI 190
           AYRRTL  L+ASGPLSWE+  MLTNLR +LH+SNDEHLME ++    GI
Sbjct: 388 AYRRTLAALHASGPLSWEQSTMLTNLRCSLHISNDEHLMELKNLISAGI 436


>ref|XP_004139421.1| PREDICTED: uncharacterized protein LOC101208549 [Cucumis sativus]
           gi|449524611|ref|XP_004169315.1| PREDICTED:
           uncharacterized protein LOC101223903 [Cucumis sativus]
          Length = 493

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/54 (61%), Positives = 43/54 (79%), Gaps = 5/54 (9%)
 Frame = -3

Query: 336 AYRRTLVELYASGPLSWEKEGMLTNLRITLHVSNDEHLMEGQS-----FGGFGI 190
           AYR T+  LYASGPLSWEKE +LT+LR++LH+SNDEHLME ++     + G+GI
Sbjct: 339 AYRCTMEALYASGPLSWEKELLLTDLRLSLHISNDEHLMEIKNLVSTIYMGYGI 392


>gb|AFK44933.1| unknown [Medicago truncatula]
          Length = 417

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 336 AYRRTLVELYASGPLSWEKEGMLTNLRITLHVSNDEHLM 220
           AY RTL  +YASGPLSWEKE +LTNLRI+L++SNDEHLM
Sbjct: 367 AYHRTLGAMYASGPLSWEKEELLTNLRISLNISNDEHLM 405


>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = -3

Query: 336 AYRRTLVELYASGPLSWEKEGMLTNLRITLHVSNDEHLME 217
           AYR T+  LYASGP SWE+E M+TNLR++LH+SNDEHLME
Sbjct: 330 AYRCTMEALYASGPFSWEQEEMVTNLRLSLHISNDEHLME 369


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