BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026888
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   201   4e-50
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_003611888.1| Pentatricopeptide repeat-containing protein ...   195   3e-48
ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46

>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  201 bits (512), Expect = 4e-50
 Identities = 99/157 (63%), Positives = 122/157 (77%)
 Frame = -2

Query: 473 DSDEDDHETEHVDPSISDANENGVQLKPWFDPAALASALNYWRPEELSALEDANFVWTTR 294
           D DEDD+E  +     +D +E  V+LKPW DP ALA+AL+ W PE +S LEDA FVWTTR
Sbjct: 319 DDDEDDYENVNNGDVHTDTSE--VRLKPWLDPKALANALSQWSPEVVSMLEDAKFVWTTR 376

Query: 293 LVSKMIRNFRSADTAWHFFTWVSYQPGFCHNVYTLSRMITKLARAGKVNLVDQLIYKIER 114
           LV K++RNF S +TAW+FF WV+YQPGF H+VYT+ RM+T LAR GKV LVD+LI KI  
Sbjct: 377 LVCKVLRNFSSPETAWYFFCWVAYQPGFTHDVYTVQRMMTLLARHGKVELVDKLITKIRI 436

Query: 113 EGIKLSFSTIKLIIDFYGISKNGEAALKVFQGAKTLC 3
           EG++L FSTI+LIIDFYGISKN +AALKVF+  + LC
Sbjct: 437 EGMRLPFSTIRLIIDFYGISKNADAALKVFRDDRPLC 473


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  199 bits (505), Expect = 3e-49
 Identities = 98/157 (62%), Positives = 120/157 (76%), Gaps = 1/157 (0%)
 Frame = -2

Query: 470 SDEDDHETEHVDPSISDANENGVQLKPWFDPAALASALNYWRPEELSALEDANFVWTTRL 291
           SD+DD E  H   S  DA  +GVQLKPW DP ALA+ALN W P E+ ALE+A F+WTTRL
Sbjct: 317 SDDDDDENNH---SSDDAGVDGVQLKPWLDPRALANALNNWDPNEVLALEEAKFIWTTRL 373

Query: 290 VSKMIRNFRSADTAWHFFTWVSYQP-GFCHNVYTLSRMITKLARAGKVNLVDQLIYKIER 114
           V K++RNF S +TAW FF WV+YQP GF HN+YT+ RM+T LAR G V LV++L+ KI R
Sbjct: 374 VCKILRNFNSPETAWKFFCWVAYQPGGFNHNIYTVQRMMTLLARHGHVELVEKLLLKIRR 433

Query: 113 EGIKLSFSTIKLIIDFYGISKNGEAALKVFQGAKTLC 3
           E I+L  STI+LIIDFYGIS+N +AALKVF  A++LC
Sbjct: 434 EEIRLPVSTIRLIIDFYGISRNADAALKVFHDAESLC 470


>ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|222836798|gb|EEE75191.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  196 bits (498), Expect = 2e-48
 Identities = 98/157 (62%), Positives = 118/157 (75%)
 Frame = -2

Query: 473 DSDEDDHETEHVDPSISDANENGVQLKPWFDPAALASALNYWRPEELSALEDANFVWTTR 294
           D DED+ E E+   + +D  E  V+LKPW DP ALA ALN W P+ +SALEDA FVWTTR
Sbjct: 183 DGDEDEDEDENHGCAFADIQE--VRLKPWLDPRALAKALNKWSPDVVSALEDAKFVWTTR 240

Query: 293 LVSKMIRNFRSADTAWHFFTWVSYQPGFCHNVYTLSRMITKLARAGKVNLVDQLIYKIER 114
           LV K++RN  S +TAW FF WV+YQPGF H VYT+ RM+T LA+ GKV LVDQLI KI  
Sbjct: 241 LVWKVLRNINSPETAWDFFCWVAYQPGFTHCVYTVQRMMTLLAKHGKVELVDQLINKIRS 300

Query: 113 EGIKLSFSTIKLIIDFYGISKNGEAALKVFQGAKTLC 3
           EG++L FSTI+LIIDF GISKN +AALKVF+  + LC
Sbjct: 301 EGMRLPFSTIRLIIDFCGISKNADAALKVFREDRALC 337


>ref|XP_003611888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513223|gb|AES94846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 659

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/157 (58%), Positives = 122/157 (77%)
 Frame = -2

Query: 473 DSDEDDHETEHVDPSISDANENGVQLKPWFDPAALASALNYWRPEELSALEDANFVWTTR 294
           D DE++++ E+ +      + +G++LKPW DP +LASAL  W P+E+SALE ANFVWTTR
Sbjct: 324 DEDENEYKGENENEVSQCDHVDGIRLKPWLDPRSLASALQNWSPDEVSALEGANFVWTTR 383

Query: 293 LVSKMIRNFRSADTAWHFFTWVSYQPGFCHNVYTLSRMITKLARAGKVNLVDQLIYKIER 114
           LV K++R+FRS DTAW+FF WV+ +PGF HN+YT+ R++T LAR G+  LVD+LI KI  
Sbjct: 384 LVCKILRSFRSPDTAWNFFCWVADRPGFTHNIYTVQRIMTLLARHGRTELVDRLILKIRI 443

Query: 113 EGIKLSFSTIKLIIDFYGISKNGEAALKVFQGAKTLC 3
           EG++L FSTI+LIIDFYGISKN +AALKVF   + LC
Sbjct: 444 EGMRLPFSTIRLIIDFYGISKNADAALKVFNDDQILC 480


>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Glycine max]
          Length = 658

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/159 (56%), Positives = 117/159 (73%), Gaps = 4/159 (2%)
 Frame = -2

Query: 467 DEDDHETEHVDPSISDANE----NGVQLKPWFDPAALASALNYWRPEELSALEDANFVWT 300
           DED++E E  D +ISDA +    +G+ LKPW DP AL SAL  W P+E++ALE ANFVWT
Sbjct: 325 DEDENENEDQDENISDAGQCNHVDGIHLKPWMDPRALVSALRNWSPDEVAALESANFVWT 384

Query: 299 TRLVSKMIRNFRSADTAWHFFTWVSYQPGFCHNVYTLSRMITKLARAGKVNLVDQLIYKI 120
           TRLV KM+RNF++ + AW FF W + Q GF H++YT+ R+ T LAR G+ +LVD+LI KI
Sbjct: 385 TRLVCKMLRNFKTPEAAWSFFCWAANQRGFTHDIYTVQRITTLLARHGRTDLVDRLISKI 444

Query: 119 EREGIKLSFSTIKLIIDFYGISKNGEAALKVFQGAKTLC 3
             E ++L FSTI++IIDFYGISK  +AALKVF   + LC
Sbjct: 445 RMERMRLPFSTIRMIIDFYGISKKADAALKVFNDDRILC 483