BLASTX nr result

ID: Bupleurum21_contig00026885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026885
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526048.1| PREDICTED: uncharacterized protein At5g12080...   113   5e-23
ref|XP_003603197.1| Fgenesh protein [Medicago truncatula] gi|355...   111   2e-22
ref|XP_003523652.1| PREDICTED: uncharacterized protein At5g12080...   107   2e-21
ref|XP_003603202.1| Fgenesh protein [Medicago truncatula] gi|355...   107   3e-21
ref|XP_002309474.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19

>ref|XP_003526048.1| PREDICTED: uncharacterized protein At5g12080-like [Glycine max]
          Length = 767

 Score =  113 bits (282), Expect = 5e-23
 Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
 Frame = -2

Query: 671 DIMDTNAKYKRSGEISMTDSRKSKEVVVVISGQERDMK-GSPSRVSNDSPIENVEFTQSY 495
           D+++      + GE++M +  K +EV+V I  +++  +  SP R+ ND+ +   + +   
Sbjct: 2   DVINKQQGGLKCGEVTMAE--KKREVMVAIPNEQQHSRVNSPHRILNDNEVAGAK-SPPL 58

Query: 494 TNSGGDAIFSPSPNRPPKLPT-NETLTRRKSLARSVFSKPKSRFGEQPISLNSDMLEESS 318
             +  +  F PSPN+PPK+ T N  LTRRKSL RSV+SKPKSRFGEQP  ++  +LE+++
Sbjct: 59  NCASPEIRFMPSPNKPPKVFTSNANLTRRKSLTRSVYSKPKSRFGEQPYPIDGTLLEDNA 118

Query: 317 SLVPEHMSSSGNSPNKNLLGASPNNKGASTNNSLKEMMRSVSITTPRTPLMDSTRKVNED 138
           +   +   + G SP K    ASPNN   +   ++      +S+ TP+TPLM S     ED
Sbjct: 119 NSTLQENLTVG-SPYK----ASPNNNNKA--GTVNRTFSILSVITPKTPLMASPGPAGED 171

Query: 137 EDEEIYQKV 111
            DE IY+KV
Sbjct: 172 FDEIIYKKV 180


>ref|XP_003603197.1| Fgenesh protein [Medicago truncatula] gi|355492245|gb|AES73448.1|
           Fgenesh protein [Medicago truncatula]
          Length = 772

 Score =  111 bits (277), Expect = 2e-22
 Identities = 80/198 (40%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
 Frame = -2

Query: 665 MDTNAKYKRSGEISMTDSRKSKEVVVVISGQERDMKGSPSRVSNDSPIENVEFTQSYTN- 489
           MD+N K+   GE+SM ++R+  EVVV IS   RD         +D  ++  E +  Y+  
Sbjct: 1   MDSN-KHHGGGEVSMMENRR--EVVVPISNVSRDHGQDHD---HDHELKVFESSPRYSTK 54

Query: 488 ------SGGDAIFSPSPNRPPKLPT-NETLTRRKSLARSVFSKPKSRFGEQPISLNSDML 330
                 +  +  F PSPN+PPK P     LT RKS  RSV+SKPKSRFGEQP  ++  +L
Sbjct: 55  SPPLNCASPEIRFIPSPNKPPKSPAATAKLTTRKSFKRSVYSKPKSRFGEQPYPIDETLL 114

Query: 329 EE--SSSLVPEHMSSSGNSPNK-NLLGASPNNKGASTNNSLKEMMRSVSITTPRTPLMDS 159
           EE  + S + EH++ S    N  N    SPNNK  + N S+       S+ TPRTPLM S
Sbjct: 115 EENVTYSNLQEHLAVSSPYRNTFNKASHSPNNKSGTVNRSVS----ITSVVTPRTPLMAS 170

Query: 158 TRKVNEDEDEEIYQKVST 105
                ED DE I++KV +
Sbjct: 171 PGPAGEDLDEIIFRKVES 188


>ref|XP_003523652.1| PREDICTED: uncharacterized protein At5g12080-like [Glycine max]
          Length = 845

 Score =  107 bits (268), Expect = 2e-21
 Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 10/187 (5%)
 Frame = -2

Query: 641 RSGEISMTDSRKSKEVVVVISGQ---------ERDMKGSPSRVSNDSPIENVEFTQSYTN 489
           + GE+SM  S K +EV+V I  +         ++    SP R  ND+ +     +     
Sbjct: 83  KGGEVSM--SEKKREVMVAIPHEGGAESLMPKQQSRVNSPHRALNDNEV--AAKSPPLNC 138

Query: 488 SGGDAIFSPSPNRPPKLPT-NETLTRRKSLARSVFSKPKSRFGEQPISLNSDMLEESSSL 312
           +  +  F PSPN+PPK+PT N  LTRRKSL RSV+SKPKSRFGEQ   ++  +LEE+++ 
Sbjct: 139 ASPEIRFMPSPNKPPKVPTSNAILTRRKSLTRSVYSKPKSRFGEQSYPIDGTLLEENATS 198

Query: 311 VPEHMSSSGNSPNKNLLGASPNNKGASTNNSLKEMMRSVSITTPRTPLMDSTRKVNEDED 132
             +   + G SP K    ASPNN   +   ++      +S+ TP+TPLM S     ED D
Sbjct: 199 TLQENLTVG-SPYK----ASPNNN--NKPGTVNRTFSILSVVTPKTPLMASPGLAGEDFD 251

Query: 131 EEIYQKV 111
           E IY+KV
Sbjct: 252 EIIYKKV 258


>ref|XP_003603202.1| Fgenesh protein [Medicago truncatula] gi|355492250|gb|AES73453.1|
           Fgenesh protein [Medicago truncatula]
          Length = 754

 Score =  107 bits (267), Expect = 3e-21
 Identities = 78/180 (43%), Positives = 98/180 (54%), Gaps = 14/180 (7%)
 Frame = -2

Query: 608 KSKEVVVVIS---------GQERD--MKG--SPSRVSNDSPIENVEFTQSYTNSGGDAIF 468
           K  EVVV IS         GQ+ D  +KG  S  R S  SP  N         +  +  F
Sbjct: 3   KKTEVVVAISNVGGDTHHHGQDHDHELKGVESSPRYSTKSPPLNC--------ASPEIRF 54

Query: 467 SPSPNRPPKLP-TNETLTRRKSLARSVFSKPKSRFGEQPISLNSDMLEESSSLVPEHMSS 291
            PSPN+PPK+P TNE+LT RK+L RSVFSKPKSRFGEQP  ++  +LEE+ +        
Sbjct: 55  IPSPNKPPKVPATNESLTPRKTLVRSVFSKPKSRFGEQPYPIDGTLLEENVTSSNLQDQI 114

Query: 290 SGNSPNKNLLGASPNNKGASTNNSLKEMMRSVSITTPRTPLMDSTRKVNEDEDEEIYQKV 111
           +  SP K     SPNNK    + ++   +   S+ TPRTPLM S     ED DE IY+KV
Sbjct: 115 AVTSPYK--ASRSPNNK----HGTVYRTVSITSVVTPRTPLMTSPGPAGEDPDEIIYKKV 168


>ref|XP_002309474.1| predicted protein [Populus trichocarpa] gi|222855450|gb|EEE92997.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score =  100 bits (249), Expect = 3e-19
 Identities = 58/124 (46%), Positives = 85/124 (68%), Gaps = 3/124 (2%)
 Frame = -2

Query: 467 SPSPNRPPKLPT-NETLTRRKSLARSVFSKPKSRFGEQPISLNSDMLEESSSLVPEHMSS 291
           S +  +PPK+PT NE LTRR+SL RSV+SKPKSRFGEQP  ++S +LEE+ S + E +++
Sbjct: 16  SQTQRKPPKIPTPNENLTRRRSLVRSVYSKPKSRFGEQPYGIDSTLLEENVSTLQEQIAT 75

Query: 290 SGNSPNKNLL-GASPNNKGASTNNSLKEMMRSVSITTPRTPLMDST-RKVNEDEDEEIYQ 117
           +  SP++NLL   SPNNK AS            S+ TP+TPLM S     +E+++EE+++
Sbjct: 76  A--SPHRNLLTRGSPNNKSAS------------SVITPKTPLMASPGGPADEEDEEEVWK 121

Query: 116 KVST 105
           +V +
Sbjct: 122 RVES 125


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