BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026863
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   220   3e-55
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   214   2e-53
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   212   8e-53
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               208   9e-52
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                208   1e-51

>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  220 bits (560), Expect = 3e-55
 Identities = 114/256 (44%), Positives = 162/256 (63%), Gaps = 9/256 (3%)
 Frame = -1

Query: 747 LVTSHKGMADIAVNYFKDLLGK---------KREVSDLPPDLCLPQITQNQAQRLCDTVS 595
           +VTS + +   AVNYF+D L             E+ +L P  C    +++  + L   V+
Sbjct: 120 VVTSQQDIQTEAVNYFQDFLQTIPADYEGMCVEELENLLPFRC----SEDDHRLLTRVVT 175

Query: 594 DIEIFNTFKHMAKNKSPGPDGFTPEFFVATWHILGKDVILAVRSFFENLILPKTITATAV 415
             EI      M K+KSPGPDG+T EF+ A+W I+G +VI+A++SFF    LPK + +T +
Sbjct: 176 GEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTIL 235

Query: 414 ALIPKCDSPSEMKQFWPISCCNTLYKAVSKIIASRLKPIMPDIISSSQSAFVPGRLIGDN 235
           ALIPK     E+K + PISCCN LYKA+SKI+A+RLK I+P  I  +QSAFV  RL+ +N
Sbjct: 236 ALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIEN 295

Query: 234 IMLAQSLCKGYHIQTGQPRCMIKLDIQKAFDMLNWDFLLASMAAMGFPDSFLNWIRICVT 55
           ++LA  L K YH  +   RC +K+DI KAFD L W FL   +AAM FP  F++WI +C++
Sbjct: 296 VLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMS 355

Query: 54  SCHYSIKLNGALEGFF 7
           +  +SI++NG L G+F
Sbjct: 356 TASFSIQVNGELAGYF 371


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  214 bits (545), Expect = 2e-53
 Identities = 100/198 (50%), Positives = 138/198 (69%)
 Frame = -1

Query: 600  VSDIEIFNTFKHMAKNKSPGPDGFTPEFFVATWHILGKDVILAVRSFFENLILPKTITAT 421
            V+  EI      M  NKSPGPDG+T EFF ATW + G D I A++SFF    LPK + AT
Sbjct: 750  VTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNAT 809

Query: 420  AVALIPKCDSPSEMKQFWPISCCNTLYKAVSKIIASRLKPIMPDIISSSQSAFVPGRLIG 241
             +ALIPK D   EMK + PISCCN LYK +SKI+A+RLK ++P  I  +QSAFV  RL+ 
Sbjct: 810  ILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLM 869

Query: 240  DNIMLAQSLCKGYHIQTGQPRCMIKLDIQKAFDMLNWDFLLASMAAMGFPDSFLNWIRIC 61
            +N++LA  L K YH ++  PRC +K+DI KAFD + W FLL ++ A+ FP++F +WI++C
Sbjct: 870  ENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLC 929

Query: 60   VTSCHYSIKLNGALEGFF 7
            +++  +S+++NG L GFF
Sbjct: 930  ISTATFSVQVNGELAGFF 947


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  212 bits (539), Expect = 8e-53
 Identities = 107/223 (47%), Positives = 141/223 (63%)
 Frame = -1

Query: 675  EVSDLPPDLCLPQITQNQAQRLCDTVSDIEIFNTFKHMAKNKSPGPDGFTPEFFVATWHI 496
            E+  L P  C    +    Q L   V+  EI      M  +KSPGPDG+T EFF ATW I
Sbjct: 432  ELQQLLPVRC----SDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEI 487

Query: 495  LGKDVILAVRSFFENLILPKTITATAVALIPKCDSPSEMKQFWPISCCNTLYKAVSKIIA 316
            +G +  LAV+SFF    LPK I +T +ALIPK     EMK + PISCCN LYK +SKIIA
Sbjct: 488  IGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIA 547

Query: 315  SRLKPIMPDIISSSQSAFVPGRLIGDNIMLAQSLCKGYHIQTGQPRCMIKLDIQKAFDML 136
            +RLK ++P  I+ +QSAFV  RL+ +N++LA  L K YH  T   RC IK+DI KAFD +
Sbjct: 548  NRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSV 607

Query: 135  NWDFLLASMAAMGFPDSFLNWIRICVTSCHYSIKLNGALEGFF 7
             W FL+     +GFP  F++WI IC+T+  +S+++NG L G+F
Sbjct: 608  QWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYF 650


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  208 bits (530), Expect = 9e-52
 Identities = 106/232 (45%), Positives = 151/232 (65%), Gaps = 1/232 (0%)
 Frame = -1

Query: 699 KDLLGKK-REVSDLPPDLCLPQITQNQAQRLCDTVSDIEIFNTFKHMAKNKSPGPDGFTP 523
           +D +G + RE+ DL    C    T +  + L   VS  EI      M K+KSPGPDG+T 
Sbjct: 70  EDFVGVEVRELQDLLQFRC----TNSDNEMLTREVSSEEIKTVLFSMPKDKSPGPDGYTS 125

Query: 522 EFFVATWHILGKDVILAVRSFFENLILPKTITATAVALIPKCDSPSEMKQFWPISCCNTL 343
           EF+ ATW I+G++  L V+SFF+   LPK I +  +ALIPK  +  EM+ + PISCCN L
Sbjct: 126 EFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVL 185

Query: 342 YKAVSKIIASRLKPIMPDIISSSQSAFVPGRLIGDNIMLAQSLCKGYHIQTGQPRCMIKL 163
           YK +SKIIA+RLK ++P  I+ +QSAFV  RL+ +N++LA  L K YH  +   RC IK+
Sbjct: 186 YKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKI 245

Query: 162 DIQKAFDMLNWDFLLASMAAMGFPDSFLNWIRICVTSCHYSIKLNGALEGFF 7
           DI KAFD + W FL  ++ AM F  +F++WI +C+T+  +S+++NG L G+F
Sbjct: 246 DISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYF 297


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  208 bits (529), Expect = 1e-51
 Identities = 95/186 (51%), Positives = 133/186 (71%)
 Frame = -1

Query: 564 MAKNKSPGPDGFTPEFFVATWHILGKDVILAVRSFFENLILPKTITATAVALIPKCDSPS 385
           M  NK PGPDG+T EFF ATW I G+D I A++SFF    LPK + AT +ALIPK D  +
Sbjct: 38  MPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEAT 97

Query: 384 EMKQFWPISCCNTLYKAVSKIIASRLKPIMPDIISSSQSAFVPGRLIGDNIMLAQSLCKG 205
            M+ + PISCCN +YK +SKIIA+RLK ++P  I  +QSAFV  RL+ +N++LA  L K 
Sbjct: 98  LMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKD 157

Query: 204 YHIQTGQPRCMIKLDIQKAFDMLNWDFLLASMAAMGFPDSFLNWIRICVTSCHYSIKLNG 25
           YH  +  PRC +K+DI KAFD + W FLL ++ A+ FP++F +WI++C+++  +S+++NG
Sbjct: 158 YHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNG 217

Query: 24  ALEGFF 7
            L GFF
Sbjct: 218 ELAGFF 223