BLASTX nr result

ID: Bupleurum21_contig00026858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026858
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523570.1| conserved hypothetical protein [Ricinus comm...   174   7e-42
ref|XP_004141920.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...   171   6e-41
ref|XP_004141918.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...   171   6e-41
ref|XP_004141917.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...   171   6e-41
ref|XP_002277554.1| PREDICTED: eukaryotic initiation factor 4A [...   169   3e-40

>ref|XP_002523570.1| conserved hypothetical protein [Ricinus communis]
           gi|223537132|gb|EEF38765.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 207

 Score =  174 bits (441), Expect = 7e-42
 Identities = 90/125 (72%), Positives = 102/125 (81%)
 Frame = +3

Query: 15  LYSDLAEADRALVLDKFRQATIKWNRNAIIHSXXXXXXXXXXXXSHVVVATDACLPLLSS 194
           LYSDLAEA+R  VL+KFRQ T++WN+N    S            SH++V TD CLPLL+S
Sbjct: 79  LYSDLAEAERTSVLEKFRQVTMRWNQNITAQSGNKDEIEKEDK-SHMIVVTDTCLPLLAS 137

Query: 195 GEAPISARVLINYELPTKKETYMRRMATCLEADGIVINMVVGGEVVTLKSIEESSSLVIA 374
           GE+PISARVLINYELPTKKETY RRM++CL ADGIVINMVVGGEVVTLK+IEESSSLVIA
Sbjct: 138 GESPISARVLINYELPTKKETYARRMSSCLAADGIVINMVVGGEVVTLKNIEESSSLVIA 197

Query: 375 EMPIN 389
           EMPIN
Sbjct: 198 EMPIN 202


>ref|XP_004141920.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 4 [Cucumis
           sativus] gi|449530831|ref|XP_004172395.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 3 [Cucumis
           sativus]
          Length = 208

 Score =  171 bits (433), Expect = 6e-41
 Identities = 86/125 (68%), Positives = 100/125 (80%)
 Frame = +3

Query: 15  LYSDLAEADRALVLDKFRQATIKWNRNAIIHSXXXXXXXXXXXXSHVVVATDACLPLLSS 194
           LYSDLAEADR+L+L+KFRQ T +W++     S            SH++V TDACLPLL+S
Sbjct: 82  LYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLAS 141

Query: 195 GEAPISARVLINYELPTKKETYMRRMATCLEADGIVINMVVGGEVVTLKSIEESSSLVIA 374
           GE+P+SA VLINYE+PTKKETYMRRM TC  +DGI+INMVVGGEVVTLKSIEESS LVIA
Sbjct: 142 GESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIA 201

Query: 375 EMPIN 389
           EMPIN
Sbjct: 202 EMPIN 206


>ref|XP_004141918.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 2 [Cucumis
           sativus] gi|449448330|ref|XP_004141919.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 3 [Cucumis
           sativus] gi|449530829|ref|XP_004172394.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 2 [Cucumis
           sativus]
          Length = 211

 Score =  171 bits (433), Expect = 6e-41
 Identities = 86/125 (68%), Positives = 100/125 (80%)
 Frame = +3

Query: 15  LYSDLAEADRALVLDKFRQATIKWNRNAIIHSXXXXXXXXXXXXSHVVVATDACLPLLSS 194
           LYSDLAEADR+L+L+KFRQ T +W++     S            SH++V TDACLPLL+S
Sbjct: 82  LYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLAS 141

Query: 195 GEAPISARVLINYELPTKKETYMRRMATCLEADGIVINMVVGGEVVTLKSIEESSSLVIA 374
           GE+P+SA VLINYE+PTKKETYMRRM TC  +DGI+INMVVGGEVVTLKSIEESS LVIA
Sbjct: 142 GESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIA 201

Query: 375 EMPIN 389
           EMPIN
Sbjct: 202 EMPIN 206


>ref|XP_004141917.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 1 [Cucumis
           sativus] gi|449530827|ref|XP_004172393.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 1 [Cucumis
           sativus]
          Length = 233

 Score =  171 bits (433), Expect = 6e-41
 Identities = 86/125 (68%), Positives = 100/125 (80%)
 Frame = +3

Query: 15  LYSDLAEADRALVLDKFRQATIKWNRNAIIHSXXXXXXXXXXXXSHVVVATDACLPLLSS 194
           LYSDLAEADR+L+L+KFRQ T +W++     S            SH++V TDACLPLL+S
Sbjct: 82  LYSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLAS 141

Query: 195 GEAPISARVLINYELPTKKETYMRRMATCLEADGIVINMVVGGEVVTLKSIEESSSLVIA 374
           GE+P+SA VLINYE+PTKKETYMRRM TC  +DGI+INMVVGGEVVTLKSIEESS LVIA
Sbjct: 142 GESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIA 201

Query: 375 EMPIN 389
           EMPIN
Sbjct: 202 EMPIN 206


>ref|XP_002277554.1| PREDICTED: eukaryotic initiation factor 4A [Vitis vinifera]
           gi|296082429|emb|CBI21434.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  169 bits (427), Expect = 3e-40
 Identities = 88/125 (70%), Positives = 102/125 (81%)
 Frame = +3

Query: 15  LYSDLAEADRALVLDKFRQATIKWNRNAIIHSXXXXXXXXXXXXSHVVVATDACLPLLSS 194
           LYSDLAEA+RAL+L+ FRQAT+++ +N I  S            SH+VV TDACLP L+S
Sbjct: 82  LYSDLAEAERALILENFRQATMRY-QNVIAQSGEDKEIKKGEDKSHMVVVTDACLPFLAS 140

Query: 195 GEAPISARVLINYELPTKKETYMRRMATCLEADGIVINMVVGGEVVTLKSIEESSSLVIA 374
           GE+ ISARVLINYELPTKKETYMRRMATCL ADGIVINMVVGGEVVTLKS+EESS L +A
Sbjct: 141 GESSISARVLINYELPTKKETYMRRMATCLGADGIVINMVVGGEVVTLKSMEESSGLTVA 200

Query: 375 EMPIN 389
           EMP++
Sbjct: 201 EMPMH 205