BLASTX nr result

ID: Bupleurum21_contig00026855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026855
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subs...   122   8e-26
ref|XP_004144422.1| PREDICTED: uncharacterized protein LOC101222...   121   1e-25
ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana] gi|4...   119   6e-25
ref|XP_002527246.1| conserved hypothetical protein [Ricinus comm...   118   1e-24
ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>ref|XP_002867475.1| YGGT family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313311|gb|EFH43734.1| YGGT family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 210

 Score =  122 bits (305), Expect = 8e-26
 Identities = 65/132 (49%), Positives = 85/132 (64%), Gaps = 3/132 (2%)
 Frame = +3

Query: 9   MQGVCKSSNLDQLLTICSGILQDNVVGITTHKTLFFAAIRRQA---LQSPHTVVASGVSK 179
           + GV   S + +L      I       I T   LFFA++R +    L +P TVVA+G+SK
Sbjct: 76  LAGVVTKSLIQKLSVAIVNISPQIQASIRTASPLFFASLRDRPAGYLNTPLTVVAAGLSK 135

Query: 180 CLEVYMALLAIRCALSWFPNIEWNRQPYSTIRELCDPFLLVFRDIIPPLFGTLDVSTTLA 359
            L++Y  +L +R  LSWFPNI W+RQP S IR+LCDP+L +FR+IIPP+F TLDVS  LA
Sbjct: 136 WLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLA 195

Query: 360 FMVLGFLVEVLN 395
           F VLG L  +LN
Sbjct: 196 FAVLGTLGSILN 207


>ref|XP_004144422.1| PREDICTED: uncharacterized protein LOC101222332 [Cucumis sativus]
           gi|449534163|ref|XP_004174036.1| PREDICTED:
           uncharacterized LOC101222332 [Cucumis sativus]
          Length = 228

 Score =  121 bits (303), Expect = 1e-25
 Identities = 58/104 (55%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
 Frame = +3

Query: 105 TLFFAAIR-RQALQSPHTVVASGVSKCLEVYMALLAIRCALSWFPNIEWNRQPYSTIREL 281
           +LFFAA+R R AL +P TVVA G++K L++Y  +L +R  LSWFPN+ W RQP S IR+L
Sbjct: 125 SLFFAAVRNRTALNTPLTVVAVGLAKWLDIYSGVLMVRVLLSWFPNVPWERQPLSAIRDL 184

Query: 282 CDPFLLVFRDIIPPLFGTLDVSTTLAFMVLGFLVEVLNATSRPF 413
           CDP+L +FR+IIPP+F TLDVS  LAF VLG L  ++ +++R +
Sbjct: 185 CDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGALGAIMGSSTRVY 228


>ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana]
           gi|4455358|emb|CAB36768.1| putative protein [Arabidopsis
           thaliana] gi|7269653|emb|CAB79601.1| putative protein
           [Arabidopsis thaliana] gi|110741138|dbj|BAE98662.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332660017|gb|AEE85417.1| YGGT family protein
           [Arabidopsis thaliana]
          Length = 218

 Score =  119 bits (297), Expect = 6e-25
 Identities = 63/132 (47%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
 Frame = +3

Query: 9   MQGVCKSSNLDQLLTICSGILQDNVVGITTHKTLFFAAIRRQA---LQSPHTVVASGVSK 179
           + GV   S + +L      +         T   LFFA++R +    L +P TVVA+G+SK
Sbjct: 83  LAGVVIKSLIQKLSVAIVNLSPQIQASFRTASPLFFASLRDRPAGYLNTPLTVVAAGLSK 142

Query: 180 CLEVYMALLAIRCALSWFPNIEWNRQPYSTIRELCDPFLLVFRDIIPPLFGTLDVSTTLA 359
            L++Y  +L +R  LSWFPNI W+RQP S IR+LCDP+L +FR+IIPP+F TLDVS  LA
Sbjct: 143 WLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLA 202

Query: 360 FMVLGFLVEVLN 395
           F VLG L  +LN
Sbjct: 203 FAVLGTLGSILN 214


>ref|XP_002527246.1| conserved hypothetical protein [Ricinus communis]
           gi|223533339|gb|EEF35090.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  118 bits (295), Expect = 1e-24
 Identities = 58/101 (57%), Positives = 77/101 (76%), Gaps = 3/101 (2%)
 Frame = +3

Query: 108 LFFAAIRRQA---LQSPHTVVASGVSKCLEVYMALLAIRCALSWFPNIEWNRQPYSTIRE 278
           LFFAAIR +    L +P TVVA+G++K L++Y  +L +R  LSWFPNI W+RQP S IR+
Sbjct: 122 LFFAAIRDRPSGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRD 181

Query: 279 LCDPFLLVFRDIIPPLFGTLDVSTTLAFMVLGFLVEVLNAT 401
           LCDP+L +FR+IIPP+F TLDVS  LAF VLG L  +L+++
Sbjct: 182 LCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGMLGSILSSS 222


>ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|222843547|gb|EEE81094.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  117 bits (294), Expect = 1e-24
 Identities = 64/124 (51%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
 Frame = +3

Query: 39  DQLLTICSGILQDNVVGITTHKTLFFAAIRRQA---LQSPHTVVASGVSKCLEVYMALLA 209
           DQL+ I +  LQ N+V        FFAA++ +    L +P TVVA+G++K L++Y  +L 
Sbjct: 126 DQLVAIRA--LQSNLVHSVG--PFFFAALKDRPTGYLNTPLTVVAAGLAKWLDIYSGVLM 181

Query: 210 IRCALSWFPNIEWNRQPYSTIRELCDPFLLVFRDIIPPLFGTLDVSTTLAFMVLGFLVEV 389
           +R  LSWFPNI W+RQP S IR+LCDP+L +FR+IIPP+F TLDVS  LAF VLG L  +
Sbjct: 182 VRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSI 241

Query: 390 LNAT 401
           LN++
Sbjct: 242 LNSS 245


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