BLASTX nr result

ID: Bupleurum21_contig00026852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026852
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62136.1| hypothetical protein VITISV_017371 [Vitis vinifera]    89   3e-16
ref|XP_002529313.1| hypothetical protein RCOM_0492410 [Ricinus c...    78   7e-13
ref|XP_003556930.1| PREDICTED: uncharacterized protein LOC100805...    62   5e-08
ref|XP_003536849.1| PREDICTED: uncharacterized protein LOC100817...    62   5e-08
ref|XP_002280801.2| PREDICTED: uncharacterized protein LOC100242...    58   9e-07

>emb|CAN62136.1| hypothetical protein VITISV_017371 [Vitis vinifera]
          Length = 583

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/103 (48%), Positives = 62/103 (60%), Gaps = 12/103 (11%)
 Frame = -3

Query: 275 CGMGPGRLLMECLSLSSSASKVDNDNVDDSMVHDDRNSQVLGCCGIASGLKRGNLNQSGC 96
           CG  PGRL MECLSLSSSASK+D+D+V D   H DR SQV  CC   +G++R   + SGC
Sbjct: 316 CGASPGRLFMECLSLSSSASKMDDDDVID---HTDRGSQVSDCCSSVNGVRREQPSNSGC 372

Query: 95  FSQSLQG------------SVTNSSTSGPKSWLTTYAPQSTVG 3
           F+++  G            S+TNSS   PKS L   AP  T+G
Sbjct: 373 FTRTQIGIPFSGDQSQSRCSLTNSSRFSPKSRLAVKAPPCTIG 415


>ref|XP_002529313.1| hypothetical protein RCOM_0492410 [Ricinus communis]
           gi|223531237|gb|EEF33082.1| hypothetical protein
           RCOM_0492410 [Ricinus communis]
          Length = 588

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
 Frame = -3

Query: 299 FRAENHL-TCGMGPGRLLMECLSLSSSASKVDNDNVDDSMVHDDRNSQVLGCCGIAS-GL 126
           FR E  +  C   PGR  M+CLSLSSSASK+DND  D ++ +++  SQ+ GCC + + G+
Sbjct: 325 FRTEEIIFPCVTSPGRFFMDCLSLSSSASKLDNDEDDVAVYNEEWGSQISGCCSVGNGGM 384

Query: 125 KRGNLNQSGCFSQSLQGSVTNSSTSGPKSWLTTYAPQSTVG 3
           +R   + SGC ++     +T+  +   KS LT +AP STVG
Sbjct: 385 RRERPSMSGCSNR-----ITSGFSFSTKSRLTVHAPPSTVG 420


>ref|XP_003556930.1| PREDICTED: uncharacterized protein LOC100805617 [Glycine max]
          Length = 603

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/106 (40%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
 Frame = -3

Query: 275 CGMGPGRLLMECLSLSSSASKVDNDNVDDSMVHDDRNSQVLGCCGIASG---LKRGNLNQ 105
           CG  PGRL MECLSLSSS SK D+ +   ++  +D +S    C  +  G   +KR +   
Sbjct: 333 CGTSPGRLFMECLSLSSSVSKFDDVDDGYAVNREDHHS---SCRSVGIGNNSMKRDHTCH 389

Query: 104 SGCFSQSLQG------------SVTNSSTSGPKSWLTTYAPQSTVG 3
           SG  S S  G             V   ST GPKS L  YAP ST+G
Sbjct: 390 SGILSHSQSGVPFTGDLRQAKSGVQCCSTLGPKSRLAIYAPPSTLG 435


>ref|XP_003536849.1| PREDICTED: uncharacterized protein LOC100817480 [Glycine max]
          Length = 602

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/106 (40%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
 Frame = -3

Query: 275 CGMGPGRLLMECLSLSSSASKVDNDNVDDSMVHDDRNSQVLGCCGIASG---LKRGNLNQ 105
           CG   GRL MECLSLSSS SK D+    D +  +D +S    CC +  G   +K  +   
Sbjct: 335 CGTSAGRLFMECLSLSSSVSKFDD---ADDVNREDHHS---SCCSVGIGNNSMKMEHACH 388

Query: 104 SGCFSQSLQG------------SVTNSSTSGPKSWLTTYAPQSTVG 3
           SG  S S  G             V + ST GPKS L  YAP ST+G
Sbjct: 389 SGILSHSRSGVPFTGDLRQAKSGVQSCSTLGPKSRLAVYAPPSTLG 434


>ref|XP_002280801.2| PREDICTED: uncharacterized protein LOC100242465 [Vitis vinifera]
          Length = 575

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/91 (43%), Positives = 48/91 (52%)
 Frame = -3

Query: 275 CGMGPGRLLMECLSLSSSASKVDNDNVDDSMVHDDRNSQVLGCCGIASGLKRGNLNQSGC 96
           CG  PGRL MECLSLSSSASK+D+D+   +     R        GI      G+ +QS C
Sbjct: 332 CGASPGRLFMECLSLSSSASKMDDDDQPSNSGCFTRTQ-----IGIPFS---GDQSQSRC 383

Query: 95  FSQSLQGSVTNSSTSGPKSWLTTYAPQSTVG 3
                  S+TNSS   PKS L   AP  T+G
Sbjct: 384 -------SLTNSSRFSPKSRLAVKAPPCTIG 407


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