BLASTX nr result

ID: Bupleurum21_contig00026850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026850
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19970.3| unnamed protein product [Vitis vinifera]              159   4e-37
ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267...   159   4e-37
emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]   157   1e-36
ref|XP_004169343.1| PREDICTED: zinc finger CCCH domain-containin...   140   2e-31
ref|XP_004148674.1| PREDICTED: zinc finger CCCH domain-containin...   140   2e-31

>emb|CBI19970.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score =  159 bits (402), Expect = 4e-37
 Identities = 80/101 (79%), Positives = 88/101 (87%)
 Frame = -2

Query: 568  NANPEGGVREGNCGKDEKEMRLFKVALVEFVKEILKPTWKEGQMSREVHKSIVKKVVDKV 389
            N + +GGV EGN  KDEK MR+FK ALVEFVKEILKPTWKEGQMSREVHK+IVKKVVDKV
Sbjct: 894  NLDADGGVDEGNRIKDEKGMRIFKNALVEFVKEILKPTWKEGQMSREVHKTIVKKVVDKV 953

Query: 388  TSTIQGAHVPKTQEKVDQYLACSKPKLTKLVQAYKERLSKT 266
            T TIQG HVPKTQEK+DQYL+ SKPKLTKLVQAY E+  K+
Sbjct: 954  TGTIQGEHVPKTQEKIDQYLSYSKPKLTKLVQAYVEKFLKS 994


>ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267803 [Vitis vinifera]
          Length = 913

 Score =  159 bits (402), Expect = 4e-37
 Identities = 80/101 (79%), Positives = 88/101 (87%)
 Frame = -2

Query: 568  NANPEGGVREGNCGKDEKEMRLFKVALVEFVKEILKPTWKEGQMSREVHKSIVKKVVDKV 389
            N + +GGV EGN  KDEK MR+FK ALVEFVKEILKPTWKEGQMSREVHK+IVKKVVDKV
Sbjct: 813  NLDADGGVDEGNRIKDEKGMRIFKNALVEFVKEILKPTWKEGQMSREVHKTIVKKVVDKV 872

Query: 388  TSTIQGAHVPKTQEKVDQYLACSKPKLTKLVQAYKERLSKT 266
            T TIQG HVPKTQEK+DQYL+ SKPKLTKLVQAY E+  K+
Sbjct: 873  TGTIQGEHVPKTQEKIDQYLSYSKPKLTKLVQAYVEKFLKS 913


>emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]
          Length = 913

 Score =  157 bits (397), Expect = 1e-36
 Identities = 79/101 (78%), Positives = 87/101 (86%)
 Frame = -2

Query: 568  NANPEGGVREGNCGKDEKEMRLFKVALVEFVKEILKPTWKEGQMSREVHKSIVKKVVDKV 389
            N + +GGV EGN  KDEK MR+FK ALVEFVKEILKPTWKEGQMSREVHK+IVKKVVDKV
Sbjct: 813  NLDADGGVDEGNRIKDEKGMRIFKNALVEFVKEILKPTWKEGQMSREVHKTIVKKVVDKV 872

Query: 388  TSTIQGAHVPKTQEKVDQYLACSKPKLTKLVQAYKERLSKT 266
            T TIQG HVPKTQEK+D YL+ SKPKLTKLVQAY E+  K+
Sbjct: 873  TGTIQGEHVPKTQEKIDHYLSYSKPKLTKLVQAYVEKFLKS 913


>ref|XP_004169343.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
           [Cucumis sativus]
          Length = 432

 Score =  140 bits (353), Expect = 2e-31
 Identities = 69/118 (58%), Positives = 87/118 (73%)
 Frame = -2

Query: 619 NLTMKDKKRPEEEIPSSNANPEGGVREGNCGKDEKEMRLFKVALVEFVKEILKPTWKEGQ 440
           N    D +  +E   + NAN   GV +    KD K +R FK ALVEFVKE+LKPTWKEG 
Sbjct: 314 NENKTDPEDSQENDTTENANGNDGVHDKKKSKDAKGIRAFKFALVEFVKELLKPTWKEGH 373

Query: 439 MSREVHKSIVKKVVDKVTSTIQGAHVPKTQEKVDQYLACSKPKLTKLVQAYKERLSKT 266
           +S++V+K+IVKKVVDKVT T+QG H+P+TQEK+D YL+ SK KLTKLVQAY +R+ KT
Sbjct: 374 ISKDVYKTIVKKVVDKVTGTLQGGHIPQTQEKIDHYLSFSKSKLTKLVQAYVDRVQKT 431


>ref|XP_004148674.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
            [Cucumis sativus]
          Length = 873

 Score =  140 bits (353), Expect = 2e-31
 Identities = 69/118 (58%), Positives = 87/118 (73%)
 Frame = -2

Query: 619  NLTMKDKKRPEEEIPSSNANPEGGVREGNCGKDEKEMRLFKVALVEFVKEILKPTWKEGQ 440
            N    D +  +E   + NAN   GV +    KD K +R FK ALVEFVKE+LKPTWKEG 
Sbjct: 755  NENKTDPEDSQENDTTENANGNDGVHDKKKSKDAKGIRAFKFALVEFVKELLKPTWKEGH 814

Query: 439  MSREVHKSIVKKVVDKVTSTIQGAHVPKTQEKVDQYLACSKPKLTKLVQAYKERLSKT 266
            +S++V+K+IVKKVVDKVT T+QG H+P+TQEK+D YL+ SK KLTKLVQAY +R+ KT
Sbjct: 815  ISKDVYKTIVKKVVDKVTGTLQGGHIPQTQEKIDHYLSFSKSKLTKLVQAYVDRVQKT 872


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