BLASTX nr result

ID: Bupleurum21_contig00026847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026847
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74053.1| hypothetical protein VITISV_005346 [Vitis vinifera]    67   6e-12
ref|XP_002300589.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002531762.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_002330535.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
emb|CBI39858.3| unnamed protein product [Vitis vinifera]               67   2e-09

>emb|CAN74053.1| hypothetical protein VITISV_005346 [Vitis vinifera]
          Length = 597

 Score = 67.0 bits (162), Expect(2) = 6e-12
 Identities = 33/46 (71%), Positives = 37/46 (80%)
 Frame = +1

Query: 4   SGKKARGEQVKIEKENSHYSMESDSQGSNFVFMQGADSVTSKGRQS 141
           + KK RGE+VKIEKENSH SMESDS+ SNFVFMQG  S  S G+QS
Sbjct: 249 TSKKPRGERVKIEKENSHSSMESDSRSSNFVFMQGNFSANSNGKQS 294



 Score = 28.1 bits (61), Expect(2) = 6e-12
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 137 KVEGRPGNYDGDKNDDEAQGSAQHSGKI 220
           K  G   NYDG+ N DEAQGS +  G++
Sbjct: 292 KQSGTLTNYDGE-NSDEAQGSKETVGEV 318


>ref|XP_002300589.1| predicted protein [Populus trichocarpa] gi|222847847|gb|EEE85394.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/48 (75%), Positives = 40/48 (83%)
 Frame = +1

Query: 4   SGKKARGEQVKIEKENSHYSMESDSQGSNFVFMQGADSVTSKGRQSRR 147
           +GKK RGE+VKIEKENSH SMESDS+ SNFVFMQG  SVTS G+Q  R
Sbjct: 204 NGKKPRGERVKIEKENSHSSMESDSRSSNFVFMQGDCSVTSNGKQGGR 251


>ref|XP_002531762.1| conserved hypothetical protein [Ricinus communis]
           gi|223528598|gb|EEF30618.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 652

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/48 (75%), Positives = 39/48 (81%)
 Frame = +1

Query: 4   SGKKARGEQVKIEKENSHYSMESDSQGSNFVFMQGADSVTSKGRQSRR 147
           S KK RGE+VKIEKENSH S+ESDS+ SNFVFMQGA SVTS G Q  R
Sbjct: 247 SSKKPRGERVKIEKENSHSSIESDSRSSNFVFMQGAYSVTSNGNQRER 294


>ref|XP_002330535.1| predicted protein [Populus trichocarpa] gi|222872093|gb|EEF09224.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/48 (72%), Positives = 40/48 (83%)
 Frame = +1

Query: 4   SGKKARGEQVKIEKENSHYSMESDSQGSNFVFMQGADSVTSKGRQSRR 147
           + KK RGE+VKIEKENSH SMESDS+ SNFVF+QG  SVTS G+QS R
Sbjct: 277 NSKKPRGERVKIEKENSHSSMESDSRSSNFVFVQGDFSVTSNGKQSGR 324


>emb|CBI39858.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/46 (71%), Positives = 37/46 (80%)
 Frame = +1

Query: 4   SGKKARGEQVKIEKENSHYSMESDSQGSNFVFMQGADSVTSKGRQS 141
           + KK RGE+VKIEKENSH SMESDS+ SNFVFMQG  S  S G+QS
Sbjct: 182 TSKKPRGERVKIEKENSHSSMESDSRSSNFVFMQGNFSANSNGKQS 227


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