BLASTX nr result

ID: Bupleurum21_contig00026844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026844
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245...   242   9e-62
emb|CBI14979.3| unnamed protein product [Vitis vinifera]              242   9e-62
ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|2...   224   3e-56
ref|XP_002511350.1| nucleic acid binding protein, putative [Rici...   212   1e-52
gb|AFK39377.1| unknown [Medicago truncatula]                          195   1e-47

>ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245077 [Vitis vinifera]
          Length = 421

 Score =  242 bits (618), Expect = 9e-62
 Identities = 125/196 (63%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
 Frame = +1

Query: 1   PICEAHLDLVRVTSGQVYKLRTPSAAYLSSIQIYDSSNPTKDWGFPQLSTERPLQKPCKS 180
           PICE HLDLVRVTSGQVY+L++PS+ YL+S+ IYDSSNPTKDW FP+LS ++ +  P   
Sbjct: 224 PICEVHLDLVRVTSGQVYRLKSPSSRYLASLSIYDSSNPTKDWSFPKLSVDQNML-PLSK 282

Query: 181 SGSSESIMMQGNPVYMD-SLGPGQLSVCPEDTKHAYRDRAAERRTLHGGFGVGPGQKSLP 357
             +SES +  G  +  D S+     S   +   H YRDRAAERRTLHGGFGVGPGQK+L 
Sbjct: 283 CRNSESKVTDGVAIQKDLSVLQDPKSASDKHKSHVYRDRAAERRTLHGGFGVGPGQKNLV 342

Query: 358 FAVDMAPSSPVTDNHELAAAESLNMSFGASSYPRRILESMGWQEGEALGNSVKGLIEPLQ 537
              D  PSSPV+ + E AAAE+LNMSFGA SY RRILESMGW+EGEALGN+ KGL+EPL+
Sbjct: 343 VG-DAMPSSPVSVSTEEAAAEALNMSFGAGSYARRILESMGWKEGEALGNTAKGLLEPLE 401

Query: 538 AVGNKGNAGLGWDHSR 585
           AV N+GNAGLGW HSR
Sbjct: 402 AVANRGNAGLGWIHSR 417


>emb|CBI14979.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  242 bits (618), Expect = 9e-62
 Identities = 125/196 (63%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
 Frame = +1

Query: 1   PICEAHLDLVRVTSGQVYKLRTPSAAYLSSIQIYDSSNPTKDWGFPQLSTERPLQKPCKS 180
           PICE HLDLVRVTSGQVY+L++PS+ YL+S+ IYDSSNPTKDW FP+LS ++ +  P   
Sbjct: 286 PICEVHLDLVRVTSGQVYRLKSPSSRYLASLSIYDSSNPTKDWSFPKLSVDQNML-PLSK 344

Query: 181 SGSSESIMMQGNPVYMD-SLGPGQLSVCPEDTKHAYRDRAAERRTLHGGFGVGPGQKSLP 357
             +SES +  G  +  D S+     S   +   H YRDRAAERRTLHGGFGVGPGQK+L 
Sbjct: 345 CRNSESKVTDGVAIQKDLSVLQDPKSASDKHKSHVYRDRAAERRTLHGGFGVGPGQKNLV 404

Query: 358 FAVDMAPSSPVTDNHELAAAESLNMSFGASSYPRRILESMGWQEGEALGNSVKGLIEPLQ 537
              D  PSSPV+ + E AAAE+LNMSFGA SY RRILESMGW+EGEALGN+ KGL+EPL+
Sbjct: 405 VG-DAMPSSPVSVSTEEAAAEALNMSFGAGSYARRILESMGWKEGEALGNTAKGLLEPLE 463

Query: 538 AVGNKGNAGLGWDHSR 585
           AV N+GNAGLGW HSR
Sbjct: 464 AVANRGNAGLGWIHSR 479


>ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|222844482|gb|EEE82029.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  224 bits (570), Expect = 3e-56
 Identities = 117/196 (59%), Positives = 136/196 (69%), Gaps = 1/196 (0%)
 Frame = +1

Query: 1   PICEAHLDLVRVTSGQVYKLRTPSAAYLSSIQIYDSSNPTKDWGFPQLSTERPLQKPCKS 180
           PICE HLDLVRV +GQVYKL +PS  YL+S+  YDSSNPTK W FP+LS         KS
Sbjct: 275 PICEVHLDLVRVRTGQVYKLHSPSTRYLASMSTYDSSNPTKGWDFPELSITMQDSPLIKS 334

Query: 181 SGSSESIMMQGNP-VYMDSLGPGQLSVCPEDTKHAYRDRAAERRTLHGGFGVGPGQKSLP 357
           SG  ES    G+      ++   QLS       HAYRDRAAERR LHGGFGVGPGQKS  
Sbjct: 335 SGKGESRSADGDADSKCTTVLSNQLSASKMQASHAYRDRAAERRNLHGGFGVGPGQKSSL 394

Query: 358 FAVDMAPSSPVTDNHELAAAESLNMSFGASSYPRRILESMGWQEGEALGNSVKGLIEPLQ 537
           F      SS V+ + E AAAE+L+MSFGA SY R+ILE+MGW+EGEALGN+ KGL+EP++
Sbjct: 395 FGDVGGSSSAVSTSTEEAAAEALSMSFGAGSYARKILENMGWKEGEALGNTTKGLVEPIK 454

Query: 538 AVGNKGNAGLGWDHSR 585
           AVGN GNAGLGW   R
Sbjct: 455 AVGNMGNAGLGWPQGR 470


>ref|XP_002511350.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550465|gb|EEF51952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 417

 Score =  212 bits (539), Expect = 1e-52
 Identities = 113/195 (57%), Positives = 135/195 (69%)
 Frame = +1

Query: 1   PICEAHLDLVRVTSGQVYKLRTPSAAYLSSIQIYDSSNPTKDWGFPQLSTERPLQKPCKS 180
           PICEAHLDLVRV +G VYKL TPSA YL+S+  YDSSNPT DWGFP+LST        K 
Sbjct: 221 PICEAHLDLVRVRTGLVYKLHTPSARYLASLSSYDSSNPTIDWGFPELSTNGQAISTTKF 280

Query: 181 SGSSESIMMQGNPVYMDSLGPGQLSVCPEDTKHAYRDRAAERRTLHGGFGVGPGQKSLPF 360
            G  E  +   +     S+   QLS   +   + YRDRAAERRTLHG FGVGPG+KS   
Sbjct: 281 YGKREPKLADEDNEKGWSMLTNQLSRTKKQRIYEYRDRAAERRTLHGSFGVGPGEKS-SL 339

Query: 361 AVDMAPSSPVTDNHELAAAESLNMSFGASSYPRRILESMGWQEGEALGNSVKGLIEPLQA 540
             D+  +SPV+ + E AAA++LNMS GA SY R+ILE+MGW+EGEALG + KGLI P+QA
Sbjct: 340 VEDVFGTSPVSTSTEEAAAKALNMSLGAGSYARKILENMGWKEGEALGKTRKGLIIPIQA 399

Query: 541 VGNKGNAGLGWDHSR 585
           VGN G+AGLGW   R
Sbjct: 400 VGNMGSAGLGWSQGR 414


>gb|AFK39377.1| unknown [Medicago truncatula]
          Length = 507

 Score =  195 bits (496), Expect = 1e-47
 Identities = 107/191 (56%), Positives = 127/191 (66%)
 Frame = +1

Query: 1   PICEAHLDLVRVTSGQVYKLRTPSAAYLSSIQIYDSSNPTKDWGFPQLSTERPLQKPCKS 180
           PICE  LDLVRV +GQVY+LR PSA Y++S+  YDS++PTKDW FPQLS+        KS
Sbjct: 317 PICEVDLDLVRVKTGQVYRLRNPSARYVASLSSYDSADPTKDWDFPQLSSNTNSTHVSKS 376

Query: 181 SGSSESIMMQGNPVYMDSLGPGQLSVCPEDTKHAYRDRAAERRTLHGGFGVGPGQKSLPF 360
           S S+ S   +   V      P QLS   +  K  YRDRAAERR LHGGFGVGPGQK L  
Sbjct: 377 SQSTPSTSTEIPMVKDLPTLPSQLSASKQ-IKCQYRDRAAERRILHGGFGVGPGQKKL-- 433

Query: 361 AVDMAPSSPVTDNHELAAAESLNMSFGASSYPRRILESMGWQEGEALGNSVKGLIEPLQA 540
            VD   +S      E+A  E+L MSFG  SY R +LE MGW+EGE LG+S KGL+EP+Q 
Sbjct: 434 GVDDDTTSSPDACPEVATEEALKMSFGPGSYARNLLEGMGWKEGEGLGSSTKGLVEPIQP 493

Query: 541 VGNKGNAGLGW 573
           VGN G+AGLGW
Sbjct: 494 VGNIGSAGLGW 504


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