BLASTX nr result

ID: Bupleurum21_contig00026838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026838
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|22353...   421   e-115
ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853...   419   e-115
ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb...   389   e-106
ref|XP_003544952.1| PREDICTED: uncharacterized protein LOC100783...   381   e-103
ref|XP_002322496.1| predicted protein [Populus trichocarpa] gi|2...   347   3e-93

>ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|223534788|gb|EEF36478.1|
            Nibrin, putative [Ricinus communis]
          Length = 529

 Score =  421 bits (1082), Expect = e-115
 Identities = 218/352 (61%), Positives = 259/352 (73%), Gaps = 8/352 (2%)
 Frame = +1

Query: 19   MVWGLFPADPLSGENKYYIFSKGTYKVGRKGCDVIINKDKGVSRVHAEIVFDAMILLDHR 198
            MVW LFPADPLSGE+KYYIF KGTYKVGRKGCDVIINKDKGVSR+HAEI+ D MI L+  
Sbjct: 1    MVWALFPADPLSGEDKYYIFKKGTYKVGRKGCDVIINKDKGVSRIHAEIIVDEMISLNPM 60

Query: 199  HRNI--ASKVKVKDCSKYGTFINKDLVSKKKVHEFPSKETTLQDGDLVSFGTGNATYRFS 372
              N    S+V+++DCSKYGTFINK+L SK+KVHEFP+KETTL+DGD+VSFGTGNATY FS
Sbjct: 61   KSNSDRTSRVRIRDCSKYGTFINKNLDSKEKVHEFPNKETTLKDGDMVSFGTGNATYSFS 120

Query: 373  FVPFKFSVCCSVPFQ---KLQEKISSIGASAIRNWSMECTHVLVDEITPLNEDVVDAIVA 543
            FVP  F VCCS  FQ    LQ+K+SSIGA      S ECTHV++D   PL +DV++AIVA
Sbjct: 121  FVPLIFFVCCSGSFQVNDPLQDKVSSIGACITFQLSEECTHVIMDHQMPLKKDVIEAIVA 180

Query: 544  KKPIVCHKWVEFIAETNICSEIPSCSSHAPTLKVEGLSVRYADSISRENCLRGYTFLLES 723
            KKP+V   WVE +AE  I SEIPS SS+ PTL VEG+ V+  DS++R NCL+GYTFLLES
Sbjct: 181  KKPMVLQSWVELVAEKGIGSEIPSWSSYVPTLTVEGVPVKVVDSVTRANCLKGYTFLLES 240

Query: 724  ALKYQLKDRLQALLEVSGAKVIAVEAFYQGSEG---EGNERIILVIPAGLADGSERFRHL 894
               Y+  DRLQA+LEV GA ++ +E FY  +EG   + N R++ VIP G AD   RF  L
Sbjct: 241  LNMYKFGDRLQAMLEVGGANIVFIEEFYSSNEGLDYKENFRMVCVIPQGSADKFGRFSKL 300

Query: 895  SFLLRVNEIQLICATLSGKLDXXXXXXXXXXXXXXCSTDETVVADSDEEIET 1050
            S L RVNE+ L+ A +SG LD              CSTDETVVADSDEE+ET
Sbjct: 301  SSLSRVNEVDLLYAVVSGHLDLSKLILPTVVVSSSCSTDETVVADSDEEVET 352


>ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853048 [Vitis vinifera]
            gi|296083807|emb|CBI24024.3| unnamed protein product
            [Vitis vinifera]
          Length = 595

 Score =  419 bits (1076), Expect = e-115
 Identities = 216/354 (61%), Positives = 260/354 (73%), Gaps = 9/354 (2%)
 Frame = +1

Query: 19   MVWGLFPADPLSGENKYYIFSKGTYKVGRKGCDVIINKDKGVSRVHAEIVFDAMILLD-- 192
            MVWGLFP DPLSGE+ YYIF+KGTYKVGRKGCDVI+ KDKGVSR+HAEI+ D+MI LD  
Sbjct: 1    MVWGLFPVDPLSGEDSYYIFAKGTYKVGRKGCDVIVKKDKGVSRIHAEIIVDSMISLDPQ 60

Query: 193  -HRHRNIASKVKVKDCSKYGTFINKDLVSKKKVHEFPSKETTLQDGDLVSFGTGNATYRF 369
             ++  N++S V+++DCSKYGTFINKDL SK+K+HEFP+KETTL+DGDLVSFGTGNATYRF
Sbjct: 61   WNKSSNVSSNVRIRDCSKYGTFINKDLGSKEKLHEFPNKETTLKDGDLVSFGTGNATYRF 120

Query: 370  SFVPFKFSVCCSVPFQ---KLQEKISSIGASAIRNWSMECTHVLVDEITPLNEDVVDAIV 540
             FVP  F V  S PFQ    LQ+KISSIGAS  R WS ECTHVLVD+   + ED+VD  +
Sbjct: 121  GFVPLIFFVYRSEPFQMNHSLQDKISSIGASVTRAWSSECTHVLVDQFMLVKEDLVDIFL 180

Query: 541  AKKPIVCHKWVEFIAETNICSEIPSCSSHAPTLKVEGLSVRYADSISRENCLRGYTFLLE 720
            AKKP+V + W+EF+AE NI +EIPSC+ + PTL   G+SV+  DSISRENCL+G TFLLE
Sbjct: 181  AKKPLVLNDWIEFVAEKNIRNEIPSCNDYVPTLTCGGVSVKVGDSISRENCLKGCTFLLE 240

Query: 721  SALKYQLKDRLQALLEVSGAKVIAVEAF---YQGSEGEGNERIILVIPAGLADGSERFRH 891
             A KY   DRLQ+LLE SGAKV +++      QG EG  N R++ VIPA  AD  + F +
Sbjct: 241  PAHKYNFGDRLQSLLEASGAKVDSIDGLSSRSQGLEGGENNRVVHVIPACSADKFDSFHN 300

Query: 892  LSFLLRVNEIQLICATLSGKLDXXXXXXXXXXXXXXCSTDETVVADSDEEIETA 1053
               +  V E+ LI A +SG LD              CSTDETVVADSD E+ETA
Sbjct: 301  RRSVSSVKEMNLISAVISGHLDPSTIISPPVLVSSSCSTDETVVADSDAEVETA 354


>ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb|AES99064.1| Nibrin
            [Medicago truncatula]
          Length = 571

 Score =  389 bits (1000), Expect = e-106
 Identities = 206/353 (58%), Positives = 254/353 (71%), Gaps = 8/353 (2%)
 Frame = +1

Query: 19   MVWGLFPADPLSGENKYYIFSKGTYKVGRKGCDVIINKDKGVSRVHAEIVFDAMILLD-- 192
            MVWGLFP DPLSGE+ YYIF  GTYKVGRKGCDVI+ KDKGVSRVHAEIV + M +L+  
Sbjct: 1    MVWGLFPVDPLSGEDNYYIFKPGTYKVGRKGCDVIVTKDKGVSRVHAEIVVNTMNMLNPL 60

Query: 193  -HRHRNIASKVKVKDCSKYGTFINKDLVSKKKVHEFPSKETTLQDGDLVSFGTGNATYRF 369
             +  R+++S V+++DCSKYGTF++K++ SKKKVHE P+KET LQDGDLVSFGTG+ATY+F
Sbjct: 61   QNVRRHLSSSVQIRDCSKYGTFVSKNIGSKKKVHELPNKETALQDGDLVSFGTGSATYKF 120

Query: 370  SFVPFKFSVCCSVPFQK-LQEKISSIGASAIRNWSMECTHVLVDEITPLNEDVVDAIVAK 546
              VP    +C S    + L+EKISSIGAS     + ECTHVLVD++ PL +D+VDA VAK
Sbjct: 121  CHVPLILFICSSNQVDRSLEEKISSIGASISHTLNEECTHVLVDQLMPLKKDLVDAAVAK 180

Query: 547  KPIVCHKWVEFIAETNICSEIPSCSSHAPTLKVEGLSVRYADSISRENCLRGYTFLLESA 726
            K  V   W+EF AE NI +EIPSC SH PT+ VEG+S+R AD  SRENCL+GYTF+LES 
Sbjct: 181  KSCVLKTWLEFFAEKNISNEIPSCHSHIPTVSVEGVSIRVADPKSRENCLKGYTFVLESV 240

Query: 727  LKYQLKDRLQALLEVSGAKVIAVEAF---YQGSEGEGNERIILVIPAGLADGSERF-RHL 894
              Y+  D+L +LLEV+GAK I  + F    QGSE   + R++ VIP G A     F + L
Sbjct: 241  HLYKFGDQLNSLLEVAGAKTILFQEFSSHSQGSEYGDDNRMVCVIPGGGAACKPDFNKLL 300

Query: 895  SFLLRVNEIQLICATLSGKLDXXXXXXXXXXXXXXCSTDETVVADSDEEIETA 1053
            S LL+VNEI +I A LSG+LD              CSTDET+VADSD E+ETA
Sbjct: 301  SSLLKVNEIDIINAALSGELDRSILKSPCVLISSSCSTDETIVADSDTEVETA 353


>ref|XP_003544952.1| PREDICTED: uncharacterized protein LOC100783205 [Glycine max]
          Length = 555

 Score =  381 bits (978), Expect = e-103
 Identities = 202/364 (55%), Positives = 250/364 (68%), Gaps = 7/364 (1%)
 Frame = +1

Query: 19   MVWGLFPADPLSGENKYYIFSKGTYKVGRKGCDVIINKDKGVSRVHAEIVFDAMIL---L 189
            MVWGLFP DPLSGE+KYYIF  G YKVGRKGCDVII KDKGVSRVHAEIV + +     L
Sbjct: 1    MVWGLFPVDPLSGEDKYYIFKTGLYKVGRKGCDVIITKDKGVSRVHAEIVVNTVNPVNPL 60

Query: 190  DHRHRNIASKVKVKDCSKYGTFINKDLVSKKKVHEFPSKETTLQDGDLVSFGTGNATYRF 369
             ++  +++S + ++DCSKYGTFINK+  +KKKVHE P+KET L++GDLVSFGTG ATY+F
Sbjct: 61   PNKCSHLSSSIHIRDCSKYGTFINKNGGAKKKVHELPNKETALENGDLVSFGTGTATYKF 120

Query: 370  SFVPFKFSVCCSVPF-QKLQEKISSIGASAIRNWSMECTHVLVDEITPLNEDVVDAIVAK 546
              VP  F +C S    Q L+EKISSIGAS        CTHVLVD++ PL +D+VDA+VAK
Sbjct: 121  CHVPLVFFICSSNKVDQSLEEKISSIGASITHTLGEGCTHVLVDQLMPLKKDLVDAVVAK 180

Query: 547  KPIVCHKWVEFIAETNICSEIPSCSSHAPTLKVEGLSVRYADSISRENCLRGYTFLLESA 726
            K  V   W+EF AE NI +EIPSC S+ PT+  EG S++ AD   RE+CL+GYTFLLES 
Sbjct: 181  KSCVLKNWLEFFAEKNISTEIPSCHSYIPTVSAEGESIKIADPRMREDCLKGYTFLLESE 240

Query: 727  LKYQLKDRLQALLEVSGAKVIAVEAFYQGSEGEG---NERIILVIPAGLADGSERFRHLS 897
              Y+  D+L+ LLEV+GAKV++ E F   S+G     +  ++ VIP G A  S  F  LS
Sbjct: 241  HLYKFGDQLKPLLEVAGAKVVSSEDFSSNSQGSDYGEDNHVVCVIPGGPACKSNLFNKLS 300

Query: 898  FLLRVNEIQLICATLSGKLDXXXXXXXXXXXXXXCSTDETVVADSDEEIETAIPVPDSVA 1077
             LLRVNE+ +ICA  SG+LD              CSTDET+VADSD E+ETA  V  + A
Sbjct: 301  SLLRVNEMDVICAAFSGQLDLSILKSPCVLVSSSCSTDETIVADSDIEVETATSVRSNDA 360

Query: 1078 ADID 1089
               D
Sbjct: 361  FSND 364


>ref|XP_002322496.1| predicted protein [Populus trichocarpa] gi|222869492|gb|EEF06623.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  347 bits (890), Expect = 3e-93
 Identities = 185/322 (57%), Positives = 227/322 (70%), Gaps = 9/322 (2%)
 Frame = +1

Query: 19  MVWGLFPADPLSGENKYYIFSKGTYKVGRKGCDVIINKDKGVSRVHAEIVFDAMILLDH- 195
           MVWGLFP DPLSGE+KYYIF+KG YKVGRKGCDVII KDKGVSR+HAE+V D MI +DH 
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFTKGVYKVGRKGCDVIICKDKGVSRIHAELVVDEMISMDHP 60

Query: 196 --RHRNIASKVKVKDCSKYGTFINKDLVSKKKVHEFPSKETTLQDGDLVSFGTGNATYRF 369
                ++ S+V ++DCSKYGT+INK+     KVH+F +KET+L+DGD+VSFGTG A YRF
Sbjct: 61  LHMKSDLPSRVLIRDCSKYGTYINKE-----KVHKFLNKETSLKDGDVVSFGTGTAVYRF 115

Query: 370 SFVPFKFSVCCSVPFQK---LQEKISSIGASAIRNWSMECTHVLVDEITPLNEDVVDAIV 540
            FVP  F V CS  FQ    L++K+SSIGA    N S ECTHVL DE+ P+ E +VDAIV
Sbjct: 116 CFVPLVFFVYCSESFQVDQLLRDKVSSIGACITYNLSEECTHVLADELMPVKEHLVDAIV 175

Query: 541 AKKPIVCHKWVEFIAETNICSEIPSCSSHAPTLKVEGLSVRYADSISRENCLRGYTFLLE 720
           +KKPIV   WVE +AE  I  EIPS SS+ PTL VEG+SV+ A S +R  CL G+T LLE
Sbjct: 176 SKKPIVLRSWVELVAEKRIGLEIPSWSSYIPTLTVEGVSVKVAASGTRAKCLEGFTCLLE 235

Query: 721 SALKYQLKDRLQALLEVSGAKVIAVEAFYQGSEG---EGNERIILVIPAGLADGSERFRH 891
           S   Y+ KDRLQ+LLEV GAK++ VE F   ++G     +  ++ VIP G  D    F  
Sbjct: 236 SINMYKFKDRLQSLLEVCGAKIVLVEEFCSNAKGLDCGQDSHVVCVIPRGSPDKFNLFNK 295

Query: 892 LSFLLRVNEIQLICATLSGKLD 957
           L  L RVNE+ L+ A L+G LD
Sbjct: 296 LGSLSRVNELDLLRAVLAGHLD 317


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