BLASTX nr result

ID: Bupleurum21_contig00026826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026826
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279111.1| PREDICTED: uncharacterized protein LOC100244...   218   6e-57
ref|XP_003594077.1| BSD domain-containing protein [Medicago trun...   218   2e-54
ref|XP_002516813.1| synapse-associated protein, putative [Ricinu...   205   1e-50
ref|XP_002312727.1| predicted protein [Populus trichocarpa] gi|2...   199   4e-50
ref|XP_004167627.1| PREDICTED: BSD domain-containing protein 1-l...   196   6e-48

>ref|XP_002279111.1| PREDICTED: uncharacterized protein LOC100244278 [Vitis vinifera]
          Length = 426

 Score =  218 bits (554), Expect(2) = 6e-57
 Identities = 120/233 (51%), Positives = 162/233 (69%), Gaps = 9/233 (3%)
 Frame = -1

Query: 719 AWSLGSTLFKTIASKSESVIGTYRRDLEEFSSGLKKETAVIRQAATRAVKDLPGSFEAGA 540
           AWS G  L KT+ASKSESVI +YRRD+EEF +GLKKETAVIR  A+RAVKDLP S E GA
Sbjct: 42  AWSFGG-LIKTLASKSESVIESYRRDIEEFGTGLKKETAVIRDVASRAVKDLPASLEVGA 100

Query: 539 AVAQESLESVGQAIDNL--------TDIIAHGKDSLLANDDYDRESSDFKQIGSVSNNLN 384
           +VAQ+SLESVGQAID++         +II HG+D+LLA +++D +S        +S+  +
Sbjct: 101 SVAQDSLESVGQAIDDIGSSVWRGTAEIITHGRDALLAAEEHDIDSPSDSSSQQLSSQ-S 159

Query: 383 VSLKPYSRVDALIRAVECDLNTYCKEVEEVDEFNEWRLGFVLDXXXXXXXXXXXXXXXXX 204
           +S + YSR D  +RA++CD NTY +E E++D F++W+LGFVL+                 
Sbjct: 160 LSSQRYSRFDVQLRAIQCDENTYREEPEDLDGFSKWKLGFVLEDKSAEIENLSEANGVMG 219

Query: 203 XIYNEIVPAGKVDEETFWARLLFRIYKVKKAEEARTKLVNRAISG-EEEELSW 48
            IY+++VP   VD +TFW+R  +RI+K+K  E+AR  LVNRAI+G EEE+LSW
Sbjct: 220 EIYSKVVP-NVVDHDTFWSRYFYRIHKLKLVEDARVNLVNRAIAGDEEEDLSW 271



 Score = 30.4 bits (67), Expect(2) = 6e-57
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 948 MDFFKSVFSDDHDSEEDRSNSQTTLTASPISQSTTNPNP 832
           M+FFKSVF+DD +   D  +S           +  NPNP
Sbjct: 1   MNFFKSVFADDPEPASDPPHSAAHPDPGDDEPNHRNPNP 39


>ref|XP_003594077.1| BSD domain-containing protein [Medicago truncatula]
           gi|355483125|gb|AES64328.1| BSD domain-containing
           protein [Medicago truncatula]
          Length = 457

 Score =  218 bits (555), Expect = 2e-54
 Identities = 126/235 (53%), Positives = 166/235 (70%), Gaps = 11/235 (4%)
 Frame = -1

Query: 719 AWSLGSTLFKTIASKSESVIGTYRRDLEEFSSGLKKETAVIRQAATRAVKDLPGSFEAGA 540
           AWS G  L +T+ASKSESV+  YRRDLEEFSSGLK ET+VIR+AA+RAVKDLP S + GA
Sbjct: 38  AWSFGG-LIQTLASKSESVLENYRRDLEEFSSGLKIETSVIREAASRAVKDLPASLDVGA 96

Query: 539 AVAQESLESVGQAIDNL--------TDIIAHGKDSLLANDDYDRESSDFKQI-GSVSNNL 387
           +VAQESLE+VGQAID++          II+HG++SLLA D  D +S+D   I   +S++ 
Sbjct: 97  SVAQESLETVGQAIDDIGSTVWKSTAQIISHGRESLLAPDS-DSDSNDSNNIKRDLSSSS 155

Query: 386 NV-SLKPYSRVDALIRAVECDLNTYCKEVEEVDEFNEWRLGFVLDXXXXXXXXXXXXXXX 210
           +V  LK YSR D L+RA++ D+NTY  E E++  FNEW+LGFVLD               
Sbjct: 156 SVGDLKRYSRFDVLVRALQSDVNTYLDEPEDLVNFNEWKLGFVLDDKVDEIENLIKENDV 215

Query: 209 XXXIYNEIVPAGKVDEETFWARLLFRIYKVKKAEEARTKLVNRAISG-EEEELSW 48
              IY +IVP+ K+D+E FW+R  ++++K+K+AE+AR K V RAISG EEE+LSW
Sbjct: 216 VDEIYVKIVPS-KIDDEIFWSRYFYKLHKLKQAEDARAKFVKRAISGDEEEDLSW 269


>ref|XP_002516813.1| synapse-associated protein, putative [Ricinus communis]
           gi|223543901|gb|EEF45427.1| synapse-associated protein,
           putative [Ricinus communis]
          Length = 454

 Score =  205 bits (522), Expect = 1e-50
 Identities = 118/233 (50%), Positives = 155/233 (66%), Gaps = 9/233 (3%)
 Frame = -1

Query: 719 AWSLGSTLFKTIASKSESVIGTYRRDLEEFSSGLKKETAVIRQAATRAVKDLPGSFEAGA 540
           AWS G  L KT+++KSES+I TYR+D EE  SGL+KETAVIR  A+RAVK LP SFE GA
Sbjct: 38  AWSFGD-LIKTLSTKSESMIQTYRQDFEELGSGLRKETAVIRDVASRAVKVLPASFEIGA 96

Query: 539 AVAQESLESVGQAIDNL--------TDIIAHGKDSLLANDDYDRESSDFKQIGSVSNNLN 384
           +VAQESLE+VGQAID++          II+HGKDS+LA+D+Y+  S+D        N  +
Sbjct: 97  SVAQESLETVGQAIDDIGATVWKSTAQIISHGKDSILASDNYN--SND-------RNQES 147

Query: 383 VSLKPYSRVDALIRAVECDLNTYCKEVEEVDEFNEWRLGFV-LDXXXXXXXXXXXXXXXX 207
           ++LK YSR D  + A++CDLNTYC E E+  E+  W LGF  L+                
Sbjct: 148 LNLKRYSRFDMQLNAIQCDLNTYCNEPEDKVEYENWILGFFDLEEKKLEIDSLLGENRVV 207

Query: 206 XXIYNEIVPAGKVDEETFWARLLFRIYKVKKAEEARTKLVNRAISGEEEELSW 48
              YNE+VP+ +VD  +FW+R  ++++K+KKAEEAR  LV RAISG EE+L W
Sbjct: 208 EEFYNELVPS-RVDSGSFWSRYFYKVHKLKKAEEARALLVKRAISG-EEDLRW 258


>ref|XP_002312727.1| predicted protein [Populus trichocarpa] gi|222852547|gb|EEE90094.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  199 bits (505), Expect(2) = 4e-50
 Identities = 111/234 (47%), Positives = 155/234 (66%), Gaps = 10/234 (4%)
 Frame = -1

Query: 719 AWSLGSTLFKTIASKSESVIGTYRRDLEEFSSGLKKETAVIRQAATRAVKDLPGSFEAGA 540
           AWS  S L KTI++KSES+I TY++DL+E  SG  KE AVIR  A+RAV DLP SFE+GA
Sbjct: 45  AWSFDS-LIKTISTKSESIIQTYKKDLQELRSGFNKENAVIRHVASRAVHDLPASFESGA 103

Query: 539 AVAQESLESVGQAIDNL--------TDIIAHGKDSLLANDDYDRESSDFKQIGSVSNNLN 384
           AVAQ SLESVGQ ID++          II+HGKDS+ +  D+ R+ +D     S +   +
Sbjct: 104 AVAQHSLESVGQVIDDIGSTVWNSTAQIISHGKDSVFSAVDHHRDLNDDSDASSSTKRHH 163

Query: 383 VSLKPYSRVDALIRAVECDLNTYCKEVEEVDEFNEWRL-GFVLDXXXXXXXXXXXXXXXX 207
           + +K YSR DA +RA++CD++TYC E  + +++ +W   GFV +                
Sbjct: 164 LGVK-YSRFDAQVRALQCDMDTYCSEPGDKEDYEKWESEGFVFEEKNEEIKRLISENEVV 222

Query: 206 XXIYNEIVPAGKVDEETFWARLLFRIYKVKKAEEARTKLVNRAISG-EEEELSW 48
             IY ++VP+ KVD+++FW+R  +R++K+K+AEEAR  LV RAISG EEE+LSW
Sbjct: 223 NQIYYKVVPS-KVDDQSFWSRYFYRLFKLKQAEEARALLVKRAISGDEEEDLSW 275



 Score = 26.6 bits (57), Expect(2) = 4e-50
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 948 MDFFKSVFSDDHDSEEDRSNSQTTLTASPISQSTTNPNP 832
           M+FFKSVF +D              TA P + S+ NP+P
Sbjct: 1   MNFFKSVFDED--------------TAPPNNPSSDNPDP 25


>ref|XP_004167627.1| PREDICTED: BSD domain-containing protein 1-like [Cucumis sativus]
          Length = 384

 Score =  196 bits (499), Expect = 6e-48
 Identities = 108/237 (45%), Positives = 150/237 (63%), Gaps = 13/237 (5%)
 Frame = -1

Query: 719 AWSLGSTLFKTIASKSESVIGTYRRDLEEFSSGLKKETAVIRQAATRAVKDLPGSFEAGA 540
           +WS G  L KT+A+KSESVI  YRRDLEE  SGL+KET+VIR+ A+RAVKDLP + + GA
Sbjct: 40  SWSFGG-LIKTLATKSESVISNYRRDLEELGSGLRKETSVIREVASRAVKDLPTTLDVGA 98

Query: 539 AVAQESLESVGQAIDNL--------TDIIAHGKDSLLANDDYDRESSDFKQIGSVSNNL- 387
           +VAQESLESVGQAID++        + II+HG+D+ LA+D       +   I   SN L 
Sbjct: 99  SVAQESLESVGQAIDDIGSAVWKSTSKIISHGRDTFLASDLVSENHENNSDIVISSNQLN 158

Query: 386 ---NVSLKPYSRVDALIRAVECDLNTYCKEVEEVDEFNEWRLGFVLDXXXXXXXXXXXXX 216
              N+  K Y+R +  + A++ DLNTY +E  +++ +  W+LGFVL+             
Sbjct: 159 KPRNIEFKQYNRFNTQLVAIQRDLNTYLEEPNDIENYKNWKLGFVLEEKEKEIEDLVKES 218

Query: 215 XXXXXIYNEIVPAGKVDEETFWARLLFRIYKVKKAEEARTKLVNRAISG-EEEELSW 48
                 Y  +VP+ ++  + FW+R  +  +K+K+AEEAR KLV RAIS  +EEELSW
Sbjct: 219 DDVRETYRTVVPS-RISHDIFWSRYFYNFHKIKQAEEARVKLVKRAISAKDEEELSW 274


Top