BLASTX nr result

ID: Bupleurum21_contig00026812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026812
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    98   8e-19
ref|XP_002533065.1| conserved hypothetical protein [Ricinus comm...    88   8e-16
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    85   5e-15
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    84   9e-15
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    82   3e-14

>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   RFITHPESLAARLYKARYFADSEFMKSKLGNNPSFIWRSIVEAKEVISAGSCWRIGTGTE 180
           R + +P+ L  +LYKARY+ + +F+ S LG NPS+IW S+ + +++I  G  W+IG GTE
Sbjct: 19  RLVENPDLLVGKLYKARYYPNGDFLSSLLGTNPSYIWASLQQVRDLICKGVQWKIGKGTE 78

Query: 181 VDIVGQPWLNNAENPYISTNSP-SLPNQKVASLFRTGSKEWDRDI 312
           V I    WL +A N +I TN P  L  Q V SL + G+ +WD++I
Sbjct: 79  VSIGLHEWLLDASNGFIETNLPDELRLQPVCSLLKPGTCDWDQEI 123


>ref|XP_002533065.1| conserved hypothetical protein [Ricinus communis]
           gi|223527129|gb|EEF29304.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   RFITHPESLAARLYKARYFADSEFMKSKLGNNPSFIWRSIVEAKEVISAGSCWRIGTGTE 180
           R + +P SL  ++YKARY+    F+ SKLG NPSFIW S+ +  +VI  G+ W+IG G  
Sbjct: 8   RLLLNPNSLVGQVYKARYYPTGTFLSSKLGANPSFIWASLQKISDVIRRGTRWKIGRGET 67

Query: 181 VDIVGQPWLNNAENPYISTN-SPSLPNQKVASLFRTGSKEWDRDI 312
           + I    WL +  N +I T+    +  + V+ LF+TG+ EWD  I
Sbjct: 68  ITIGHHAWLLDDTNGFIQTDLLEEVCRKPVSCLFKTGTFEWDNKI 112


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +1

Query: 7   ITHPESLAARLYKARYFADSEFMKSKLGNNPSFIWRSIVEAKEVISAGSCWRIGTGTEVD 186
           IT P+SL ARL KARY+   +F+ ++LG+NPSF W+ I  ++ ++  GS WRIG G  +D
Sbjct: 395 ITKPDSLIARLLKARYYRSGDFLSARLGHNPSFTWKGIWSSRAILLKGSRWRIGDGCSID 454

Query: 187 IVGQPWLNNAENPYIST 237
           +   PWL +AEN  + T
Sbjct: 455 VWNNPWLRDAENFKVET 471


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   RFITHPESLAARLYKARYFADSEFMKSKLGNNPSFIWRSIVEAKEVISAGSCWRIGTGTE 180
           + ++ PESL  RL K +YF+ S++  + +G+NPS++WRSI  AK+VI  G  W IGTG  
Sbjct: 221 KLVSSPESLITRLLKVKYFSRSDYFGASIGHNPSYVWRSIWSAKDVIRRGFQWSIGTGEH 280

Query: 181 VDIVGQPWLNNAENPYISTNSP-SLPNQKVASLFRTGSKEWDRDI 312
           + +   PW++N      ST+     P+  V+ L  T  K+W+ ++
Sbjct: 281 IPVWDHPWISNVARILPSTHHQLEWPSITVSDLLITPEKQWNVEL 325


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 34/79 (43%), Positives = 56/79 (70%)
 Frame = +1

Query: 1   RFITHPESLAARLYKARYFADSEFMKSKLGNNPSFIWRSIVEAKEVISAGSCWRIGTGTE 180
           RF+ +P+SL  R+++ARYF +S F+ ++LG+NPS++WRSI+ A+ ++  G  W I +GT+
Sbjct: 340 RFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTK 399

Query: 181 VDIVGQPWLNNAENPYIST 237
           V + G  WL ++ N  I T
Sbjct: 400 VQVWGDSWLPDSSNRLIIT 418


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