BLASTX nr result

ID: Bupleurum21_contig00026801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026801
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266568.2| PREDICTED: uncharacterized protein LOC100255...   134   2e-29
emb|CBI34299.3| unnamed protein product [Vitis vinifera]              124   4e-26
ref|XP_002520963.1| protein with unknown function [Ricinus commu...   113   5e-23
ref|XP_002539134.1| hypothetical protein RCOM_2142890 [Ricinus c...   113   5e-23
ref|XP_002512302.1| protein with unknown function [Ricinus commu...   108   2e-21

>ref|XP_002266568.2| PREDICTED: uncharacterized protein LOC100255461 [Vitis vinifera]
          Length = 1169

 Score =  134 bits (338), Expect = 2e-29
 Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 6/185 (3%)
 Frame = -2

Query: 611  GKSPSNISKNLIYSPDISTDTLTSKVFHDFCMDKSITKFKPGDFWALYSSKDDNSRNYVQ 432
            G+S ++ +KN I S  IS++ +    F+DF  +KS  KF+ G  WALYS  D   +NY Q
Sbjct: 929  GQSSNSFTKNAIVSASISSNKILEAQFYDFSGEKSEEKFQTGQLWALYSEVDRMPKNYAQ 988

Query: 431  IQKVEPSLML-VYAALLESTQP-----LPASCGMFTVSKEEPEIFFLRSFSHKVKVKSFP 270
            ++K+EP+    ++   LE+  P      P  CG F +   + ++F    FSH+++ +S  
Sbjct: 989  VKKIEPTPSFRLHVVFLEACSPPKDMVQPVCCGTFKLKNGKTKVFPRADFSHQIRAESIG 1048

Query: 269  NNRYAICPWKGEIWAMHKCWNDKSSGFVLKDCMFDIVEVLKCNKDNIEVSSLIPQVGFNF 90
             N++AI P KG++WA++K W +      + +C +DIVEVL+ N  + +VS L+P  GF  
Sbjct: 1049 KNKFAILPIKGQVWALYKNWENNLMCSDIVNCKYDIVEVLEDNDHSTKVSVLLPLNGFKS 1108

Query: 89   VFKAP 75
            V+KAP
Sbjct: 1109 VYKAP 1113



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
 Frame = -2

Query: 569  PDISTDTLTSKV----FHDFCMDKSITKFKPGDFWALYSSKDDNSRNYVQIQKV-EPSLM 405
            PD++ + ++ +     F DF  DK    F     WA+Y   D   R Y +I+KV  P   
Sbjct: 506  PDVTHEPVSLECLDCDFSDFDKDKREDCFSVDQIWAIYDPIDGMPRFYARIRKVFAPEFK 565

Query: 404  LVYAALLESTQP----------LPASCGMFTVSKEEPEIFFLRSFSHKVK-VKSFPNNRY 258
            L +  L  S             LP +CG FT  + E E   L  FSH+V   K    N Y
Sbjct: 566  LRFTWLEPSPDDASEIAWVKNELPYACGKFTYGQTE-ETADLPMFSHQVHGEKGGIRNSY 624

Query: 257  AICPWKGEIWAMHKCWND--KSSGFVLKDCMFDIVEVLKCNKDNIEVSSLIPQVGFNFVF 84
             + P KGE WA++K WN    S+  + +   F+ VE+L         S  +P  G    +
Sbjct: 625  FVYPRKGETWAIYKNWNTDWSSNPEIHRKYEFEYVEIL---------SDFVPDAGIGVAY 675


>emb|CBI34299.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  124 bits (310), Expect = 4e-26
 Identities = 62/174 (35%), Positives = 102/174 (58%), Gaps = 6/174 (3%)
 Frame = -2

Query: 611  GKSPSNISKNLIYSPDISTDTLTSKVFHDFCMDKSITKFKPGDFWALYSSKDDNSRNYVQ 432
            G+S ++ +KN I S  IS++ +    F+DF  +KS  KF+ G  WALYS  D   +NY Q
Sbjct: 611  GQSSNSFTKNAIVSASISSNKILEAQFYDFSGEKSEEKFQTGQLWALYSEVDRMPKNYAQ 670

Query: 431  IQKVEPSLML-VYAALLESTQP-----LPASCGMFTVSKEEPEIFFLRSFSHKVKVKSFP 270
            ++K+EP+    ++   LE+  P      P  CG F +   + ++F    FSH+++ +S  
Sbjct: 671  VKKIEPTPSFRLHVVFLEACSPPKDMVQPVCCGTFKLKNGKTKVFPRADFSHQIRAESIG 730

Query: 269  NNRYAICPWKGEIWAMHKCWNDKSSGFVLKDCMFDIVEVLKCNKDNIEVSSLIP 108
             N++AI P KG++WA++K W +      + +C +DIVEVL+ N  + +VS L+P
Sbjct: 731  KNKFAILPIKGQVWALYKNWENNLMCSDIVNCKYDIVEVLEDNDHSTKVSVLLP 784


>ref|XP_002520963.1| protein with unknown function [Ricinus communis]
            gi|223539800|gb|EEF41380.1| protein with unknown function
            [Ricinus communis]
          Length = 1130

 Score =  113 bits (283), Expect = 5e-23
 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
 Frame = -2

Query: 530  HDFCMDKSITKFKPGDFWALYSSKDDNSRNYVQIQKVEPS------LMLVYAALLESTQP 369
            +DF  +KS  KF+ G  WA++S KD   RNYVQ++K+E        + ++    L+  + 
Sbjct: 917  YDFRKEKSEDKFRSGQIWAVHSDKDGLPRNYVQVKKIETETGFRLHVAMLETCTLQKDRR 976

Query: 368  LPASCGMFTVSKEEPEIFFLRSFSHKVKVKSFPNNRYAICPWKGEIWAMHKCWNDKSSGF 189
             PASCG F V     ++  + +FSHKVK KS   N Y I P KGEIWA++K WN + S  
Sbjct: 977  QPASCGTFRVKNGNSKVLLINAFSHKVKAKSTGRNTYEIFPRKGEIWAVYKSWNSEVSCS 1036

Query: 188  VLKDCMFDIVEVLKCNKDNIEVSSLIPQVGFNFVFKAPS 72
                   DIVEV++ N  +++V  L+P  G + ++ +P+
Sbjct: 1037 DQGTGECDIVEVIEDNSRSVKVVVLMPGKGQDTLYMSPT 1075


>ref|XP_002539134.1| hypothetical protein RCOM_2142890 [Ricinus communis]
           gi|223508448|gb|EEF23249.1| hypothetical protein
           RCOM_2142890 [Ricinus communis]
          Length = 230

 Score =  113 bits (283), Expect = 5e-23
 Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
 Frame = -2

Query: 530 HDFCMDKSITKFKPGDFWALYSSKDDNSRNYVQIQKVEPS------LMLVYAALLESTQP 369
           +DF  +KS  KF+ G  WA++S KD   RNYVQ++K+E        + ++    L+  + 
Sbjct: 17  YDFRKEKSEDKFRSGQIWAVHSDKDGLPRNYVQVKKIETETGFRLHVAMLETCTLQKDRR 76

Query: 368 LPASCGMFTVSKEEPEIFFLRSFSHKVKVKSFPNNRYAICPWKGEIWAMHKCWNDKSSGF 189
            PASCG F V     ++  + +FSHKVK KS   N Y I P KGEIWA++K WN + S  
Sbjct: 77  QPASCGTFRVKNGNSKVLLINAFSHKVKAKSTGRNTYEIFPRKGEIWAVYKSWNSEVSCS 136

Query: 188 VLKDCMFDIVEVLKCNKDNIEVSSLIPQVGFNFVFKAPS 72
                  DIVEV++ N  +++V  L+P  G + ++ +P+
Sbjct: 137 DQGTGECDIVEVIEDNSRSVKVVVLMPGKGQDTLYMSPT 175


>ref|XP_002512302.1| protein with unknown function [Ricinus communis]
            gi|223548263|gb|EEF49754.1| protein with unknown function
            [Ricinus communis]
          Length = 1131

 Score =  108 bits (269), Expect = 2e-21
 Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 6/159 (3%)
 Frame = -2

Query: 530  HDFCMDKSITKFKPGDFWALYSSKDDNSRNYVQIQKVEPS------LMLVYAALLESTQP 369
            +DF  +KS  KF+ G  WA++S KD   RNYVQ++K+E        + ++    L+  + 
Sbjct: 918  YDFRKEKSEDKFRSGQIWAVHSDKDGLPRNYVQVKKIETGTGFRLHVAMLETCTLQKDRR 977

Query: 368  LPASCGMFTVSKEEPEIFFLRSFSHKVKVKSFPNNRYAICPWKGEIWAMHKCWNDKSSGF 189
             PASCG F V     ++  + +FSHKVK KS   N Y I P KGEIWA++K  N + S  
Sbjct: 978  QPASCGTFRVKNGNSKVLLINAFSHKVKAKSTGRNTYEIFPRKGEIWAVYKSLNSEVSCS 1037

Query: 188  VLKDCMFDIVEVLKCNKDNIEVSSLIPQVGFNFVFKAPS 72
                   DIVEV++ N   ++V  L+P  G + ++ +P+
Sbjct: 1038 DQGTGECDIVEVIEDNSRGVKVVVLMPGKGQDTLYMSPT 1076


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