BLASTX nr result

ID: Bupleurum21_contig00026765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026765
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276253.2| PREDICTED: uncharacterized protein LOC100254...    82   3e-14
emb|CAN83984.1| hypothetical protein VITISV_001099 [Vitis vinifera]    82   3e-14
ref|XP_002530590.1| membrane associated ring finger 1,8, putativ...    79   5e-13
gb|ABR16909.1| unknown [Picea sitchensis]                              67   1e-09
ref|XP_003528492.1| PREDICTED: uncharacterized protein LOC100791...    65   4e-09

>ref|XP_002276253.2| PREDICTED: uncharacterized protein LOC100254146 [Vitis vinifera]
          Length = 304

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 51/104 (49%), Positives = 57/104 (54%), Gaps = 9/104 (8%)
 Frame = -3

Query: 285 MVDELMVCVDRIIASACFKSENERGERLLSDDTNGGGQQVIFVDKLEKNNDKNAFNLING 106
           MVD+ MVCVDRIIASACF+S N  G  +  +    G + V  V         N+     G
Sbjct: 1   MVDDFMVCVDRIIASACFESVNGGGGGVRGE----GSENVCAVT--------NSGGAGGG 48

Query: 105 EVGCCSK---------TVRECRICQEEDEEHDMEAPCACNGTLK 1
              C  K          V ECRICQEEDEEH MEAPCACNGTLK
Sbjct: 49  GEWCSKKEGGMVKGGGVVVECRICQEEDEEHAMEAPCACNGTLK 92


>emb|CAN83984.1| hypothetical protein VITISV_001099 [Vitis vinifera]
          Length = 219

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 51/104 (49%), Positives = 57/104 (54%), Gaps = 9/104 (8%)
 Frame = -3

Query: 285 MVDELMVCVDRIIASACFKSENERGERLLSDDTNGGGQQVIFVDKLEKNNDKNAFNLING 106
           MVD+ MVCVDRIIASACF+S N  G  +  +    G + V  V         N+     G
Sbjct: 1   MVDDFMVCVDRIIASACFESVNGGGGGVRGE----GSENVCAVT--------NSGGAGGG 48

Query: 105 EVGCCSK---------TVRECRICQEEDEEHDMEAPCACNGTLK 1
              C  K          V ECRICQEEDEEH MEAPCACNGTLK
Sbjct: 49  GEWCSKKEGGMVKGGGVVVECRICQEEDEEHAMEAPCACNGTLK 92


>ref|XP_002530590.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223529889|gb|EEF31820.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 370

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
 Frame = -3

Query: 285 MVDELMVCVDRI-IASACFKSENERGERLLSDDTNGGGQQVIFVDKLEKNNDKNAFNLIN 109
           MVD+ +VCVDR+ IASACF+S N  GE    +  +     + F     KN++        
Sbjct: 1   MVDDFVVCVDRLLIASACFESVNNGGETERHNLESSNESAICF-----KNSNGGG----- 50

Query: 108 GEVGCCS--------KTVRECRICQEEDEEHDMEAPCACNGTLK 1
           G  GC S        K + ECRICQEED+ H MEAPCACNGTLK
Sbjct: 51  GGEGCSSSSPLIKKVKEMVECRICQEEDDVHSMEAPCACNGTLK 94


>gb|ABR16909.1| unknown [Picea sitchensis]
          Length = 287

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/95 (36%), Positives = 54/95 (56%)
 Frame = -3

Query: 285 MVDELMVCVDRIIASACFKSENERGERLLSDDTNGGGQQVIFVDKLEKNNDKNAFNLING 106
           M D L++ VDR+I  + F +  E G +  SD +     +   +  +     ++ F+L   
Sbjct: 1   MSDHLVLYVDRLITPSTFDTHVEIGSQSASDKSEASSLKDEELPLISDGPPQSTFDLSGC 60

Query: 105 EVGCCSKTVRECRICQEEDEEHDMEAPCACNGTLK 1
           + G  +  + ECRICQEEDEE +ME PCAC+G+LK
Sbjct: 61  DDGGAAFKLGECRICQEEDEEKNMETPCACSGSLK 95


>ref|XP_003528492.1| PREDICTED: uncharacterized protein LOC100791501 [Glycine max]
          Length = 241

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
 Frame = -3

Query: 285 MVDELMVCVDRIIASA-CFKSENER-----GERLLSDDTNGGGQQVIFVDKLEKNNDKNA 124
           MV++ +VC+DRIIAS  CF S NE+        ++    NGG            N D + 
Sbjct: 1   MVNDFIVCIDRIIASTTCFGSVNEKHCDGVDPVIIPVSDNGGKVCSSSSSSSSSNKDDDV 60

Query: 123 FNLINGEVGCCSKTVRECRICQEEDEEHDMEAPCACNGTLK 1
             ++            ECRICQEED+   MEAPC+CNGTLK
Sbjct: 61  VVVV------------ECRICQEEDQAQAMEAPCSCNGTLK 89


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