BLASTX nr result

ID: Bupleurum21_contig00026753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026753
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308510.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|NP_172460.6| rhamnogalacturonate lyase-like protein [Arabido...    76   3e-12
ref|XP_002892533.1| hypothetical protein ARALYDRAFT_334271 [Arab...    75   7e-12
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...    74   1e-11
ref|XP_002527356.1| lyase, putative [Ricinus communis] gi|223533...    74   2e-11

>ref|XP_002308510.1| predicted protein [Populus trichocarpa] gi|222854486|gb|EEE92033.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 33/49 (67%), Positives = 42/49 (85%)
 Frame = +3

Query: 9   IYGIYWLFTVDVPGAQLLERNINTIFLTQAKSSSPFQGIMYDYIRFEAP 155
           I+G+YWL+ +DVPG+QL+E   NTI+LTQA+S  PFQG+MYDYIRFE P
Sbjct: 624 IHGLYWLYGIDVPGSQLVEGK-NTIYLTQARSDGPFQGVMYDYIRFEGP 671


>ref|NP_172460.6| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana]
           gi|332190390|gb|AEE28511.1| rhamnogalacturonate
           lyase-like protein [Arabidopsis thaliana]
          Length = 617

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/49 (71%), Positives = 43/49 (87%)
 Frame = +3

Query: 9   IYGIYWLFTVDVPGAQLLERNINTIFLTQAKSSSPFQGIMYDYIRFEAP 155
           I+G+YWLF V+V G++LLE   NT+FLTQ +S+SPFQGIMYDYIRFEAP
Sbjct: 569 IHGLYWLFNVEVAGSKLLEGE-NTLFLTQPRSTSPFQGIMYDYIRFEAP 616


>ref|XP_002892533.1| hypothetical protein ARALYDRAFT_334271 [Arabidopsis lyrata subsp.
           lyrata] gi|297338375|gb|EFH68792.1| hypothetical protein
           ARALYDRAFT_334271 [Arabidopsis lyrata subsp. lyrata]
          Length = 633

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/49 (69%), Positives = 43/49 (87%)
 Frame = +3

Query: 9   IYGIYWLFTVDVPGAQLLERNINTIFLTQAKSSSPFQGIMYDYIRFEAP 155
           I+G+YWLF V+V G++L+E   NT+FLTQ +S+SPFQGIMYDYIRFEAP
Sbjct: 585 IHGLYWLFNVEVAGSKLVEGE-NTLFLTQPRSTSPFQGIMYDYIRFEAP 632


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/49 (67%), Positives = 41/49 (83%)
 Frame = +3

Query: 9   IYGIYWLFTVDVPGAQLLERNINTIFLTQAKSSSPFQGIMYDYIRFEAP 155
           I+G+YWL+ VDVPG +L++   NT+FLTQ +SSSPFQGIMYDYIR E P
Sbjct: 586 IHGLYWLYNVDVPGVRLVQGG-NTVFLTQPRSSSPFQGIMYDYIRLEEP 633


>ref|XP_002527356.1| lyase, putative [Ricinus communis] gi|223533275|gb|EEF35028.1|
           lyase, putative [Ricinus communis]
          Length = 755

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/49 (75%), Positives = 39/49 (79%)
 Frame = +3

Query: 9   IYGIYWLFTVDVPGAQLLERNINTIFLTQAKSSSPFQGIMYDYIRFEAP 155
           I+G+Y LF VDVPG QLLE N NTIFLTQA   SPFQGIMYDYIR E P
Sbjct: 699 IHGLYRLFNVDVPGTQLLEGN-NTIFLTQANHVSPFQGIMYDYIRLEGP 746


Top