BLASTX nr result

ID: Bupleurum21_contig00026752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026752
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515707.1| transcription regulator, putative [Ricinus c...    67   2e-09
ref|XP_004174048.1| PREDICTED: mediator-associated protein 1-lik...    66   3e-09
ref|XP_004144578.1| PREDICTED: mediator-associated protein 1-lik...    66   3e-09
ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-lik...    64   1e-08
ref|XP_002300270.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_002515707.1| transcription regulator, putative [Ricinus communis]
           gi|223545144|gb|EEF46654.1| transcription regulator,
           putative [Ricinus communis]
          Length = 383

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
 Frame = +3

Query: 114 TRNKSQVLSGYGESK-----KKQAVWSEDDDIALLKGMVDYHLQKGSDPYDDMGKFLEYI 278
           T  K +  +G GE +       Q +WSEDD+I +L G+  Y  +KG+DPY +MG F EYI
Sbjct: 130 TNKKKKPTAGVGEDEVVKRGAVQRLWSEDDEIVVLNGLSQYKSEKGADPYSEMGAFYEYI 189

Query: 279 KPFIHFDVVRKQ 314
           K  +H DV R Q
Sbjct: 190 KKSLHVDVSRNQ 201


>ref|XP_004174048.1| PREDICTED: mediator-associated protein 1-like, partial [Cucumis
           sativus]
          Length = 261

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = +3

Query: 87  NPNPEIRRSTRNKS----QVLSGYGESKKKQAVWSEDDDIALLKGMVDYHLQKGSDPYDD 254
           +PN  I+R    +     + +SG G ++    +WSEDD+I++L+GM+D+ L KGSDPY D
Sbjct: 13  DPNKRIKRIMNGEDIEEVKKVSGSGINR----LWSEDDEISILQGMIDFELAKGSDPYTD 68

Query: 255 MGKFLEYIKPFIHFDVVRKQ 314
           M +FL++IK  +  DV + Q
Sbjct: 69  MNQFLDFIKENLSVDVSKNQ 88


>ref|XP_004144578.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]
          Length = 324

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
 Frame = +3

Query: 87  NPNPEIRRSTRNKS----QVLSGYGESKKKQAVWSEDDDIALLKGMVDYHLQKGSDPYDD 254
           +PN  I+R    +     + +SG G ++    +WSEDD+I++L+GM+D+ L KGSDPY D
Sbjct: 67  DPNKRIKRIMNGEDIEEVKKVSGSGINR----LWSEDDEISILQGMIDFELAKGSDPYTD 122

Query: 255 MGKFLEYIKPFIHFDVVRKQ 314
           M +FL++IK  +  DV + Q
Sbjct: 123 MNQFLDFIKENLSVDVSKNQ 142


>ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]
          Length = 414

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = +3

Query: 150 ESKKK-QAVWSEDDDIALLKGMVDYHLQKGSDPYDDMGKFLEYIKPFIHFDVVRKQ 314
           ESKK  Q +WSEDD+IA+L GM+DY  +KGSDP  DM  F ++IK  +H DV + Q
Sbjct: 177 ESKKLFQRLWSEDDEIAILNGMIDYSAKKGSDPSLDMNAFHDFIKKSLHVDVTKAQ 232


>ref|XP_002300270.1| predicted protein [Populus trichocarpa] gi|222847528|gb|EEE85075.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/91 (36%), Positives = 51/91 (56%)
 Frame = +3

Query: 42  NSTDQFEPMSSETPPNPNPEIRRSTRNKSQVLSGYGESKKKQAVWSEDDDIALLKGMVDY 221
           N TD+ +   S+   N  P+  +   +K Q+          Q +W+EDD+IALL+G++D+
Sbjct: 130 NETDRED---SKRAKNKEPDPEKPEDSKKQLF---------QRLWTEDDEIALLRGIIDF 177

Query: 222 HLQKGSDPYDDMGKFLEYIKPFIHFDVVRKQ 314
             +KG DP  DM  F ++IK  +HFDV   Q
Sbjct: 178 TAKKGYDPSKDMNAFYDFIKKSLHFDVSMTQ 208


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