BLASTX nr result

ID: Bupleurum21_contig00026751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026751
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40211.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit...   121   7e-26
ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like...   100   1e-19

>emb|CBI40211.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/97 (58%), Positives = 66/97 (68%)
 Frame = -1

Query: 305 GHSFHANCIDIWLQQHSTCPVCRVSLRDISEKKRFMQPMFSSAFRSQYAMETLAANSCPC 126
           GH FH  CIDIWLQQHSTCPVCR+SL +  E+K  MQPMFSSA RS + ME+   +S  C
Sbjct: 88  GHFFHVTCIDIWLQQHSTCPVCRISLWEFPERKCLMQPMFSSAVRSHFGMESRNTHSYNC 147

Query: 125 LSNNHRLSTRGHESRRMDPIQEDQLQLGSDGTVPGES 15
           LS     S+R H++ RMDPIQEDQ   G DG    ES
Sbjct: 148 LSTGRGFSSRSHDNHRMDPIQEDQFGPGGDGAEAQES 184


>ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera]
          Length = 228

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/97 (58%), Positives = 66/97 (68%)
 Frame = -1

Query: 305 GHSFHANCIDIWLQQHSTCPVCRVSLRDISEKKRFMQPMFSSAFRSQYAMETLAANSCPC 126
           GH FH  CIDIWLQQHSTCPVCR+SL +  E+K  MQPMFSSA RS + ME+   +S  C
Sbjct: 107 GHFFHVTCIDIWLQQHSTCPVCRISLWEFPERKCLMQPMFSSAVRSHFGMESRNTHSYNC 166

Query: 125 LSNNHRLSTRGHESRRMDPIQEDQLQLGSDGTVPGES 15
           LS     S+R H++ RMDPIQEDQ   G DG    ES
Sbjct: 167 LSTGRGFSSRSHDNHRMDPIQEDQFGPGGDGAEAQES 203


>ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|222850859|gb|EEE88406.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/98 (52%), Positives = 65/98 (66%)
 Frame = -1

Query: 305 GHSFHANCIDIWLQQHSTCPVCRVSLRDISEKKRFMQPMFSSAFRSQYAMETLAANSCPC 126
           GHSFH  CIDIWLQQHSTCPVCR+SLR+  EKKR MQP+FSSA RS+   ET  ++S   
Sbjct: 105 GHSFHVTCIDIWLQQHSTCPVCRISLREFPEKKRVMQPLFSSAIRSRNGTETFDSHSYNY 164

Query: 125 LSNNHRLSTRGHESRRMDPIQEDQLQLGSDGTVPGESN 12
           +   H +S R + +   DPIQ++    G D    GE++
Sbjct: 165 MLTEHGISPRSYNNHGTDPIQDNHCASGGDEEEGGENS 202


>ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/99 (53%), Positives = 64/99 (64%)
 Frame = -1

Query: 305 GHSFHANCIDIWLQQHSTCPVCRVSLRDISEKKRFMQPMFSSAFRSQYAMETLAANSCPC 126
           GHSFH  CID+WLQQHSTCP+CR+SLR+  EKK  MQP+FSSA RSQY  ET  ++S   
Sbjct: 107 GHSFHVTCIDMWLQQHSTCPMCRISLREFPEKKCAMQPLFSSAIRSQYGTETFDSHSYNY 166

Query: 125 LSNNHRLSTRGHESRRMDPIQEDQLQLGSDGTVPGESNS 9
           L   H +S R  +S  MD IQ++     SDG      NS
Sbjct: 167 LLTGHGISQRSDDSHGMDTIQDN--LCASDGDEACGENS 203


>ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max]
          Length = 229

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/93 (47%), Positives = 63/93 (67%)
 Frame = -1

Query: 305 GHSFHANCIDIWLQQHSTCPVCRVSLRDISEKKRFMQPMFSSAFRSQYAMETLAANSCPC 126
           GHSFH  CID+WLQQ+STCPVCR+SLR+  ++KR MQP+FSSA +  Y +E+       C
Sbjct: 107 GHSFHVTCIDLWLQQNSTCPVCRISLREFPDRKRLMQPLFSSALQPHYDIESFDNRHYHC 166

Query: 125 LSNNHRLSTRGHESRRMDPIQEDQLQLGSDGTV 27
           +  ++ LS+R  ++  ++PI+ED      DG V
Sbjct: 167 MIADNGLSSRTPDNHAVNPIEEDHFPSEGDGAV 199


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